Dermochelys coriacea (leatherback sea turtle): 119848257
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Entry
119848257 CDS
T09064
Name
(RefSeq) cartilage oligomeric matrix protein
KO
K04659
thrombospondin 2/3/4/5
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc04145
Phagosome
dcc04510
Focal adhesion
dcc04512
ECM-receptor interaction
dcc04518
Integrin signaling
dcc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119848257
04518 Integrin signaling
119848257
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119848257
09144 Cellular community - eukaryotes
04510 Focal adhesion
119848257
09142 Cell motility
04820 Cytoskeleton in muscle cells
119848257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcc04131
]
119848257
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dcc04147
]
119848257
00536 Glycosaminoglycan binding proteins [BR:
dcc00536
]
119848257
Membrane trafficking [BR:
dcc04131
]
Endocytosis
Phagocytosis
Opsonins
119848257
Exosome [BR:
dcc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119848257
Exosomal proteins of colorectal cancer cells
119848257
Exosomal proteins of bladder cancer cells
119848257
Glycosaminoglycan binding proteins [BR:
dcc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119848257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
COMP
EGF_3
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
119848257
NCBI-ProteinID:
XP_038239768
LinkDB
All DBs
Position
25:14469176..14489601
Genome browser
AA seq
766 aa
AA seq
DB search
MISTLAFIFLLSLYCPFAASQTTSAGGGDVGRQMLTEMRETNLALKEVRDLLKQQIKEIT
FLKNTVMECDACGMNTGATGPRISITQFPRCLPNPCFPGVTCTETGSGFRCGPCPLGFTG
NGTHCTDINECSTNPCFLRVNCVNTAPGFHCDPCPIGYTGPAPKGVGLAFARANKQVCTD
INECETDSATACVPNSNCINTRGSYKCGSCKPGFVGDQIVGCRSQTERRCPNGELSPCHE
KARCIVERDGTISCVCIVGWAGNGYVCGRDTDIDGFPDEKLRCTDQKCRKDNCVTVPNSG
QEDADRDGIGDACDDDADGDGILNAEDNCVLVRNVDQRNTDKDSFGDACDNCRHVKNNDQ
QDSDSDGKGDACDDDIDGDKIKNVVDNCKKTPNPDQKDSDGDGVGDVCDSCPTISNPDQK
DADHDLVGDLCDTNQDRDGDGHQDSQDNCPSVPNSSQLDTDHDGIGDECDDDDDNDGIPD
LRPPGPDNCRLVPNPGQEDSDRDGVGDLCEDDFDKDQVIDRIDVCPENAEVTLTDFRAFQ
TVVLDPEGDAQIDPNWIVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTATDDD
YAGFIFGYQDSSSFYVVMWKQMEQTYWQANPFRAVAEPGIQLKAVKSKTGPGEYLRNSLW
HTGDTIDQVKLLWKDPRNSGWKDKTSYRWFLQHRPQVGYIRARFYEGPEMVADSGVILDT
TMRGGRLGVFCFSQENIIWSNLRYRCNDTIPEDYETFRTQLDQPMA
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgatttcgactctagccttcatttttctcctaagcctctattgtccttttgcagcaagt
cagacgacaagtgcaggaggaggtgatgtcgggcgccagatgctcacagagatgagagaa
actaacctggcactgaaggaagtcagagatttgctgaagcagcagattaaggagatcacg
ttcctgaaaaacacagtcatggagtgtgatgcctgcggcatgaacaccggggcaactggc
ccaaggatcagcataacacaatttcccagatgtttgccaaacccttgtttccctggagtt
acctgcacagagactggctctggcttccgctgtggaccctgccccctgggcttcacaggc
aacgggacccactgcacagacattaatgagtgcagcacgaatccctgcttcctaagagtc
aactgcgttaacactgcccctggcttccattgtgacccctgtcccataggctatactggg
ccagcacccaaaggggttgggctagcattcgccagagctaacaaacaggtttgcacagac
atcaatgaatgtgagacagacagcgccacagcttgtgtcccaaactccaactgcatcaac
acacgggggtcctacaagtgcgggtcttgtaagcctggctttgtaggggaccagattgtt
gggtgccggagccagacggagagacgctgtcccaacggggaactcagtccgtgccatgag
aaagctcgctgcattgtggaacgtgatgggaccatctcatgtgtgtgcattgtcgggtgg
gccgggaacggctacgtttgcgggagggacacagacatcgatggattcccggatgagaag
ctgcgctgcacagaccaaaaatgccgcaaggataactgcgtgaccgtccccaactctggc
caggaggacgcggacagggatggcatcggcgacgcgtgtgatgacgacgctgatggagat
gggatattaaatgccgaggacaactgcgtccttgtgcgcaatgtggaccagcgtaacaca
gacaaggatagcttcggcgacgcctgcgacaactgccggcacgtgaagaacaacgaccag
caggacagcgacagcgacgggaagggagacgcgtgcgacgatgacatagatggagacaag
atcaaaaacgtggtcgacaactgtaaaaaaacccccaaccctgatcagaaagacagcgat
ggggacggagtgggggatgtgtgtgacagctgccccaccatcagtaacccagaccagaaa
gatgctgaccacgaccttgtgggggacttgtgtgacaccaaccaggaccgagacggggat
ggccaccaggactcccaggataactgcccctcagtgccaaatagctcccagctggacacg
gaccatgacgggattggagatgaatgtgatgacgacgatgacaatgatgggattccggat
ctaagacctcccggccctgacaactgccggctagtccccaaccctggccaagaagattca
gaccgtgatggtgtgggggatctctgtgaagatgactttgacaaggaccaggtgattgac
agaattgacgtgtgcccagagaacgcagaggtgactctgacagatttcagggctttccag
acagtcgtgttggaccctgagggcgacgcacagattgaccctaactggattgtcctcaat
cagggcatggaaattgtccagaccatgaacagcgatcctggcctggcagtgggttacact
gcattcaacggggtggatttcgagggcaccttccacgtgaacactgccacagacgatgat
tacgcaggctttatcttcggctaccaggacagctccagtttctacgtggtgatgtggaag
cagatggagcagacgtactggcaggcaaaccccttccgcgcagtagcagaacccggaatt
cagctgaaggcagtgaaatctaaaacagggccaggagaatatctccgcaattccctttgg
cacactggagacactatagaccaggtcaaactactatggaaagaccccaggaattccggc
tggaaggacaagacctcgtatcgttggttcctacagcaccgacctcaagttggatacatc
agagctcgcttctatgaaggccctgaaatggtagcagacagtggagtcatccttgataca
actatgcgagggggtcgtctgggggtcttctgcttctcccaggagaacattatctggtcc
aacctgcgttaccgctgcaatgataccattcctgaagattatgaaacattccgaactcag
ctggaccagcccatggcttaa
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