Dermochelys coriacea (leatherback sea turtle): 119848529
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Entry
119848529 CDS
T09064
Symbol
USHBP1
Name
(RefSeq) Usher syndrome type-1C protein-binding protein 1
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
dcc03037
]
119848529 (USHBP1)
Cilium and associated proteins [BR:
dcc03037
]
Primary cilia and associated proteins
USH complex and associated proteins
119848529 (USHBP1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
FlaC_arch
Motif
Other DBs
NCBI-GeneID:
119848529
NCBI-ProteinID:
XP_038240420
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All DBs
Position
25:complement(13239495..13253455)
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AA seq
796 aa
AA seq
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MQGIRAMVQGSQTLRHERSLRCLRFSGQCFLQGELDSISEREEEADAAGADERAILRYEE
HVTTLLVTIAQLHSKAEQLQQRRSREEDEYSDQCSEYTASLPRCVQRPRSLAIHPFPMGC
VEEGGSSDVFLDLQQAVASLENAVFSRRSQARLLGSAGGETGAGGPSAVGEEWAQIAKTL
EEVERGLGDFAGLPEDNGICPWKAAPRAPGEKTSEASPELSAEDMSWIKKEIATYAERNA
ALRVALGSKEEELSRSKVTLQTFQEEREKLQRKVKELQDSLLRIETPSQPCSPSASASDT
VSTRGSVSPGREGEPWPFQDPVAAAQSLIRCLQSCSSTQHLCRLFPQHRPAASESHVREW
EARTQQLRGCIEQLKGLNQLLSGTLQEWKGHSERLSMLLGQHESNSMALHLAAQYSERCV
EAYEVLLSLAGVKLGPWLEPLEEGGSLDKGEPGAHAPDSPGGRMGAVLDEARRFLGRAEP
EGDEAESGQDGAGTHGWESAPGPGALGPRGTEEGILHEYIRRLRAEQASVEVSLLELGCQ
AAPGSAGAVIQSNDDAIKAKLDEAIRVAGGVLPRETPRPKMEKPQLLHDLVAIRESMADL
KTQLHLAEKETRGLELCTYTHRPQESAHLLLIEHLQGELDGQRGRCPSSGSSSSGDSTSC
SSCLGDVGRREAEAARSQAALDRETMMLELVGALARSRELRGQAQGLAASLEHCSATSRV
QQAQCVGITRDFFQAHSALVLAYRNARRKQEAQLQRLEAQMGAMGERHAEQLRSLTQALQ
RLEERRVAVAGSETCI
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcagggaatcagggccatggtacagggctctcagacccttcggcatgaaaggagcctg
agatgtctgcggttctctgggcagtgttttctgcagggcgagctggactcaatctccgag
agggaggaggaggccgacgcagcaggggcagacgagcgggcaatcctgcgctacgaggag
cacgtcaccacgctgctcgtcaccatcgcccagctccacagcaaggccgagcagctgcag
cagaggagaagcagagaggaagatgagtattcagaccagtgctccgaatacacagcaagc
cttcccaggtgtgtgcagaggccccggagcttagccatccatccgttccccatgggctgc
gtggaggaaggaggcagctccgacgtgttcctagatctgcagcaggctgtggcctctctg
gagaatgccgtgttctcccggcggagtcaggctcggctgcttggcagtgctggtggggag
acgggcgcaggtggccccagcgcggtgggagaggagtgggcccagatagccaagaccctg
gaagaagtagaacgaggcctgggggattttgcgggactcccggaggacaacgggatctgt
ccctggaaggcagcacccagggcgccaggggagaagacgagcgaggccagcccagagctc
tcagctgaggacatgagctggatcaagaaggaaatagccacatacgcagagaggaatgcg
gctctccgggtggcgctagggagcaaggaggaggagctaagcaggtccaaggtcaccctg
caaacattccaggaggaacgggagaagctccagagaaaggtcaaggagctgcaggactca
ctgctcagaatcgagacaccgtcccagccctgcagcccctcagcatctgccagtgacact
gtcagcaccagggggtccgtcagccccggcagggaaggggagccctggccgttccaagac
ccagttgctgcggcccagagcctgatccgatgccttcagagctgctccagcacccagcac
ctctgccgcctgttcccccagcaccgccccgcagcgtcggagagccacgtcagggagtgg
gaagcccggacacagcagctgcgagggtgcattgagcagctcaaaggcctgaaccagctg
ctctcggggacgctgcaggagtggaagggccactcggagaggctcagcatgctgctgggg
cagcacgagtccaacagcatggccctgcacctggctgcgcagtacagtgagcgctgcgtg
gaggcctacgaggtgctgctgtccctggctggggtgaagctgggtccctggctggagccc
ctggaggagggaggttccctggacaaaggagagcccggggcgcacgcccccgacagcccc
ggcggcaggatgggggctgtgctggatgaggccaggaggttcctggggagagcggagcct
gagggcgatgaggccgagtcggggcaggatggggccgggacccatggatgggaaagcgcc
cccggccccggggccctggggcccagagggacggaggaggggattctgcacgagtacatc
cggcggctgcgggcggagcaggcctcggtggaggtctccctgctggagctgggctgccag
gccgcgccaggttctgccggtgccgtgatccagagtaacgacgacgccatcaaggccaag
ctggacgaggccatcagggtcgcaggcggggtcctgcccagggagacaccaaggccaaag
atggagaagccacagctgctgcacgacttagtggccatcagggagtcaatggcggatctg
aagacccagctgcacctggcggagaaggagacgcgaggcctggagctctgcacctacacg
caccggccgcaggagtccgcccacctgctgctcatcgagcacctgcagggggagctggat
gggcagcggggccggtgccccagctccgggagcagcagcagtggagacagcaccagctgc
agcagctgcctcggggacgttgggagacgggaggcagaagctgctagatcccaggctgcc
ctggatcgggagacgatgatgctggagctggttggggcgctggcccggagcagggagctg
aggggccaagcccagggcctggcggcctccctggagcactgcagcgcgaccagccgggtg
cagcaggcccagtgtgtcgggatcaccagagacttcttccaggctcacagcgccctggtg
ctggcctacaggaatgccaggaggaagcaggaggctcagctgcagaggctggaggcccag
atgggtgcgatgggcgagcggcacgcggagcagctgcgctcgctcacacaggctctgcaa
aggctggaagagcggcgcgtggccgtggccggcagcgagacctgcatctag
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