Dermochelys coriacea (leatherback sea turtle): 119848742
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Entry
119848742 CDS
T09064
Symbol
POLB
Name
(RefSeq) DNA polymerase beta isoform X1
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119848742 (POLB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dcc03400
]
119848742 (POLB)
Enzymes [BR:
dcc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
119848742 (POLB)
DNA repair and recombination proteins [BR:
dcc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
119848742 (POLB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
119848742 (POLB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_5
NTP_transf_2
Cdd1
IMS_HHH_1
DUF3900
Motif
Other DBs
NCBI-GeneID:
119848742
NCBI-ProteinID:
XP_038240851
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All DBs
Position
26:130724..163773
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AA seq
335 aa
AA seq
DB search
MSKRKAPQESPNAGITDFLSELANYEKNVNRAIHKYNAYRKAASVISKYPSKIKSGAEAK
KLEGVGAKIADKIDEFLSTGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKLVDEGIK
TLEDLRKNEHKLNHHQRIGLKYFEDFEKRIPREEMLQMQEIVLKEVKKLDPEYIATVCGS
FRRGAESSGDMDILLTHPSFTSESTKQPKLLHQVVEQLKKIHFVTDTLSKGDTKFMGVCQ
LTSEEDGTNYPYRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEMGFTINEYTIRP
LGVTGVAGEPLPVESEKDIFDYIQWKYREPKERSE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcggaaggcgccgcaggagagccccaatgcggggatcaccgacttcctgagc
gagctggcgaactacgagaagaacgtgaacagagccatccacaagtacaacgcctacaga
aaagcagcttctgtaatatccaagtatccaagcaagataaaaagtggagctgaagcaaag
aagctggaaggagtaggggctaaaatagctgacaagattgatgagtttttatccactgga
aaactacgtaagcttgaaaagattcgacaggatgatacaagctcatctatcaatttcctg
acccgagttagtggcataggcccttctgcagctaggaagcttgtagatgaagggataaag
acattggaagatctaaggaaaaacgaacacaagctgaatcatcatcagcgaattgggcta
aaatattttgaagactttgagaaaagaatccctagagaagagatgttacagatgcaggaa
attgtattgaaagaggttaaaaaactggaccccgaatatattgcgacagtctgtggcagt
ttcaggcgaggtgcggaatcaagtggggatatggatattctcctgacccatccaagtttt
acttctgaatcgaccaaacagccaaagcttttgcaccaagttgtagaacaattgaaaaaa
atccactttgtcacagacacattgtcaaagggtgatacgaaattcatgggtgtatgtcag
ttgacaagcgaagaagatggaaccaattatccatacaggagaattgatatcaggctgatc
ccaaaggatcagtattattgtggagtactgtacttcacaggtagtgacatattcaataag
aacatgagaactcatgccctagaaatgggcttcacaatcaacgagtacacaatccggccc
ttgggagttactggagttgctggggagcccctcccagtagagagtgaaaaggatatcttt
gactacatacagtggaagtatcgagagccaaaagaacggagtgaataa
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