Dermochelys coriacea (leatherback sea turtle): 119848871
Help
Entry
119848871 CDS
T09064
Symbol
CASC3
Name
(RefSeq) LOW QUALITY PROTEIN: protein CASC3
KO
K14323
protein CASC3
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03013
Nucleocytoplasmic transport
dcc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119848871 (CASC3)
03015 mRNA surveillance pathway
119848871 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcc03019
]
119848871 (CASC3)
Messenger RNA biogenesis [BR:
dcc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119848871 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
119848871
NCBI-ProteinID:
XP_038241113
LinkDB
All DBs
Position
27:13256999..13275724
Genome browser
AA seq
709 aa
AA seq
DB search
MADRRRQRASQDSEDESDSAASDSVASPAGAARSGSPASPPRPARGAAGTLPAGGRGRGA
ESAAGAAKSPXESECESEDGIEGDAVLSDYESAEDSEAEEGEYSEEESSKVELKQESNNA
SESTGKAEKGEEKPDPKGAVTGERQSGDGQESTEPAENKVGKKVPKHLDDDEDRKNPAYI
PRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGY
DIRSAHNPDDIKPRRVRKPRFGSPPQREPNWANERQNKPPRHQDSDSAPLPTRTFISRHS
AGMGRMPPARNVPRVGGYKENRPSYRAVEANGQHLSRTGEQAKQESSYRARRVEQAPERD
PSPEAESVHVHSSPAKKEEIILESQTPSTDSVQLPPDRPIEKKSYSRARRTRNKAGDAGK
LADEVPPPEGLTPVPPKPVQVVTPPPPAKAGSWETPVESSMDGLEQDMTQLNLTEQTWTQ
GQPPFIPPRELRGIPNHMHMGAGPPPPFNRMEEMGVQGGRAKRYSSQRQRPPVPEPAPPM
HISIMEGHYYDPLQFQGPIYTHSENPAPLPPQSMIVQPEMHLPHPGLHPHQTPAPLANPG
LYPPPVSMPPGQPPPQQLLAPTYFSPPGVMNFGNPSYPYPPGALPPPPPPHLYPSTQAQV
YGGVTYYNTVQQQAQPKPSPPRRTSQPVTIKPPPPEDSTSEKSKERRNT
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaggcggcggcagcgggcctcccaggacagcgaggacgagtccgactcggcc
gcctccgacagcgtcgcctccccggccggcgcggcccgctccggctcccccgcctcgccc
ccgagaccggcccggggcgccgccgggaccctccccgccgggggccggggccgcggggcc
gagagcgcggccggggccgccaagagcccgncggagtccgagtgtgaaagtgaagatggc
atcgaaggagatgctgttctctcggattacgaaagtgcagaagactccgaggctgaggaa
ggggagtacagtgaggaggaaagctcaaaggtggagctgaagcaggagagtaacaatgcc
agtgaatccacaggaaaagcagagaaaggggaagagaaacctgacccgaaaggtgctgtg
actggcgagagacaaagcggggatgggcaggagagcactgaaccagctgagaataaagtt
gggaaaaaggtccccaagcacttggatgatgatgaggatcggaagaaccctgcttacata
ccccgcaaagggctcttctttgaacatgatctccgaggacagactcaggaggaggaagtc
aggccgaagggtcgccagcgaaagctatggaaagacgagggccgctgggaacatgacaaa
ttccgggaagatgagcaagcccccaaaagcaggcaagagctgattgcactctacggctat
gacatcaggtcagctcacaatcccgacgacatcaagccgaggagggtacgcaaaccacgg
tttgggagccctccacagcgagagccaaactgggccaacgagaggcaaaacaagccgcca
agacaccaggactctgatagtgctccgctgccaacacgaaccttcatcagccggcactcc
gcaggcatgggtaggatgcccccagccagaaacgttccaagggtgggtggctacaaagag
aaccgtccaagctaccgagctgtggaagcaaacggccagcacctctctcgaacaggtgag
caggctaaacaggagagcagttaccgggcgaggcgtgttgaacaagccccggagagagac
ccctctcctgaagcagagagtgtgcatgttcacagcagtcctgccaagaaggaagagatc
attttggaaagccagaccccgagtacagactctgtacagctgccaccagatagacccatc
gaaaaaaaatcctactcccgggccaggaggaccaggaataaagctggcgatgcaggaaag
ctggcagatgaagttccacctccagaaggattgacaccagtgcctccgaaaccagtgcag
gtagtgacgccccctccaccagcgaaggccggtagttgggagacaccagtagaatccagc
atggatggacttgagcaagacatgactcagttgaatctaactgagcagacctggacccaa
ggacagcctccgttcataccgcctcgggaacttcggggtattcctaatcatatgcacatg
ggagctggaccaccacctccgtttaacaggatggaggaaatgggagtacaggggggccgt
gcaaagcgttactcatcccagcgtcagcggccaccagttccagagcctgctccccccatg
cacatcagcatcatggaagggcactattatgatccactacaattccagggaccaatctac
acacacagcgagaatcctgccccgttgccaccccagagtatgattgtacagccagaaatg
cacctcccacatccaggtttacatccacaccagacaccagcacctttggctaaccctggc
ttatatcctccaccagtctccatgcctcctgggcaaccacccccacagcagctgctcgca
cccacctatttctcccctcctggagtcatgaattttgggaatcccagttacccctatccc
ccaggagcactcccaccaccacctcctccccatctgtatcccagcacacaggcccaggtg
tacggaggggtcacctactacaacactgtccagcagcaagcacagccgaaaccttctcct
ccacgaagaacatcccagcccgtgactatcaagccaccgcctcctgaggacagcacaagt
gaaaaatcaaaggaaaggagaaatacgtag
DBGET
integrated database retrieval system
