Dermochelys coriacea (leatherback sea turtle): 119849930
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Entry
119849930 CDS
T09064
Symbol
ATG16L2
Name
(RefSeq) protein Atg16l2 isoform X1
KO
K20868
autophagy-related protein 16-2
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119849930 (ATG16L2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcc04131
]
119849930 (ATG16L2)
03029 Mitochondrial biogenesis [BR:
dcc03029
]
119849930 (ATG16L2)
Membrane trafficking [BR:
dcc04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
119849930 (ATG16L2)
Others
Specific organelles associated proteins
Auto phagosome
119849930 (ATG16L2)
Mitochondrial biogenesis [BR:
dcc03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
119849930 (ATG16L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
ATG16
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_SCAP
Crescentin
WD40_RFWD3
Beta-prop_NWD2_C
Beta-prop_SPT8
eIF2A
DUF7310
YabA
SHE3
Beta-prop_VPS8
Rav1p_C
Cytochrom_D1
Microp_apicomplexa_20
Knl1_RWD_C
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
119849930
NCBI-ProteinID:
XP_043359938
LinkDB
All DBs
Position
1:7763194..7820408
Genome browser
AA seq
610 aa
AA seq
DB search
MAEAAGSGGGRSWKRHIVRQLQLRDRAQSGRFLDVVQAYTKLLEKSSLLVHFTEKLQAES
FDLQAPRSGRETKGSVLEPGLGPTEALQTLKIKYQGQIAEMKDVSGELAYRIIELSKLLK
AKECKLQEQKTRLASLSGRISELEAEHQQLKGQVEDLGSGNCAMKAEYDALRERYQLREG
ELRRAAEKEQELIESLVRKKVEAAENQNKKNERVKQARLSRELKKATKRTVSIVELDEVK
PAEVKVPVQDLVELEGCEKLWKRPFRSASATSMTLARCVDVFKGLLDFRLKRGNSISSGS
EVHYRSMPICLVTCLPSRVSDVQEAHFSEVNAVNFSPSSSVLATGGADSLIRLWNVAGGR
LESLQTLEGANGSITSIEFDPSGCQILAAAYNNAAQLWHIGDCKSKETLTGHADKVTAAK
FRSTHHQAVTGSRDRTVKEWDLGKGACCRTINVFSYCNDVVCCDNVIVSGHHDKKIRFWD
SRGPRCTEVIPVEGKVTSLHISQDQMHLLSCSRDNTLKVIDLKMNNVRQVFRADGFKCGS
DWTKAIFSPDKSYALVGSSDGSLYLWNMESGKLETILSGEHRASVNAVAWCFSGQCVVSV
DQAKKVVLWK
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggcggcggggagcggcggcggcaggtcctggaagcgtcacatcgtccggcag
ctgcagctccgggaccgggcgcagagcggccgcttcctggacgtggtgcaggcctatacc
aaactgttggaaaagtccagcttgctggtgcatttcacagagaagctacaggctgagtcc
tttgatctccaggcccctaggtcagggcgggaaaccaagggctccgtgctggaaccaggc
ttgggccccacagaagcacttcagaccctgaagataaagtaccaggggcaaattgcggag
atgaaagacgtcagtggggagttggcgtatcgaattattgaacttagcaaattactcaag
gccaaagagtgtaaattgcaggagcagaaaacaaggctggcatccctgagcggacggatc
tctgagctggaagcagagcatcaacagctgaagggccaggtggaggatctgggcagcggg
aactgcgccatgaaggcggaatatgacgcccttcgtgaacgttaccagctccgggagggg
gagctgcggcgagcggccgagaaggagcaggagctgattgagagcctggtgcggaagaaa
gtggaagctgctgagaaccagaacaagaagaacgagagggtgaagcaggcccggctgtcc
cgggagctgaagaaggctacgaagagaaccgtcagtatcgtggaattggacgaggtgaaa
ccggcagaggtgaaagtgcccgtccaagacctggtggaactggagggctgcgagaagctg
tggaaaaggcccttcagatctgcctccgccacatccatgactctggcccggtgcgtggat
gtcttcaagggcctgctggatttcaggctgaaacgagggaactccatcagcagcggatca
gaggtgcactaccgctccatgcccatctgcctcgtcacctgcctgccgtcccgagtcagc
gacgtccaggaggcgcacttctccgaggtgaatgcagtcaacttcagtcccagctccagc
gtgctggccacgggcggggccgacagtctcatcaggctctggaacgtggcgggagggagg
ctggagagcctgcagaccttggaaggggctaacggcagcatcaccagcatcgagtttgac
ccgtcgggctgccagatcttggcagcggcgtacaacaatgcagcgcagctgtggcatatc
ggggactgcaaatccaaagagacgctcacaggccatgcggacaaagtgacggctgccaaa
ttccgctccacccaccaccaagcggtgacgggcagtcgggacaggacagtcaaagagtgg
gacctgggcaaaggggcctgctgcaggaccatcaatgtcttctcctactgcaacgacgtg
gtgtgctgtgacaacgtcatcgtgagcggccaccacgacaagaagatccgcttctgggac
agcagggggccccgatgcacagaggtgatcccggtcgaggggaaggtcacctccctccac
atcagccaggaccagatgcacctgctgagctgctccagggacaacacgctgaaggtcatc
gacctgaagatgaacaatgtccggcaggtgttccgggccgacggcttcaagtgcggctcg
gactggacgaaggcgatcttcagccccgataagagctacgccctggtgggctcctcagat
ggctccctctacctctggaacatggagagcgggaagctggaaacgatcctgtctggggag
cacagggcctctgtgaatgccgtggcgtggtgcttctcgggccagtgtgttgtgagcgtg
gaccaggcgaagaaggtggtgctctggaaatag
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