Dermochelys coriacea (leatherback sea turtle): 119850018
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Entry
119850018 CDS
T09064
Symbol
CFAP54
Name
(RefSeq) cilia- and flagella-associated protein 54 isoform X2
KO
K25553
cilia- and flagella-associated protein 54
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
dcc03037
]
119850018 (CFAP54)
Cilium and associated proteins [BR:
dcc03037
]
Motile cilia and associated proteins
Sperm associated proteins
119850018 (CFAP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
fn3
Motif
Other DBs
NCBI-GeneID:
119850018
NCBI-ProteinID:
XP_038243533
LinkDB
All DBs
Position
1:complement(268721932..268906545)
Genome browser
AA seq
2976 aa
AA seq
DB search
MSKGQSAKVLEYLLWASICMESSVPLLAVHYLTWRATLYTAVCYCYYDCQASIHGEVFAR
RGLSKIDELKQLESISSSAQNSETKKVFREATIKMAVMVFKRAVYESRRKPKGFFRPKLR
VNLKEAQNLPWPRTVTERLLTEMFDGTAAHFLAILEALSDSNRQVLRPAPLVPEETEIRD
VVSELFFAGMDILAGGGSFASTQERYCTESSGVINASSTLLQLILTGKNGVSGEAAMKFI
KLAFSYEEWDVFDSTVGLIVNFLQNQDDPIWKKAEMELRLLIAMQPLVSTRRSKHGLSLQ
EHSFKEATISRSSGRRTIALQEASLKPGDPSDDLVTLATTLFSCVRTSKQTLQPDKEILV
DIVKFLWQKCKVGVQRIQMSGSAYLKYIYKFKAYRWVHILWIINEVIHSSNIGDANVVVL
AEVTLRLTAILENIVDCANKSAKTAGEKNESVLPSQTRISDIPEILKKSPAEQLHFAYEN
LEKAINGMNMSRLMTILPDGKSVLDTYCTKNSNGQNLNTSSAYGNDKPVPGNNFVMDLHL
ELIQAQHRVAVKLLNMKQGVQMDGKNLKSTKSPGKDVNCLHLFTESDIMNKIKKNKLSKA
IFLMQKAVLMFPKGSTSSFQKHLLEDALALIQKVEAEQNALCSNLKQAMTSKKNRIPPPP
LLLSRSHCSMTFKPAPFTSDVQVSWYSILGCVAAGSNLKVRLNNHHLPNAGEEIPADGKS
LLEIKGLDPNEKYIFAVAAYSSDGKLIGDAIGETTKPILAYPPLSATTARAYLTQIAYQT
DNYALAKKAFSPMWDYFVLAPSTPSADLAVISDSNNLTISQNRLCLDAVSQTSPILLHLF
LRSIFIINEINVKEGALFCDSICSKEILYNGQVARLAECERMVVAIELSNWLNDANYALQ
SVVQCYGLLAPIIYHKIASVPVVQILIKCLTVLQEVPSSTLQRKQTGCYESIQHMIACSS
FYTAQVLRSWKEYELALIIINYGKKLLDSSQTSQGQSKFNSIEEMQIDTETEDESPYSKK
KSQAAAVEKAAENLTALESNLLKLTRPGKGLSCRSFLGLGTGPEITGQEDPFFLYPIISC
WTANNAYREVMKFRKKPRFLEFFVQVLHKALNEEKFQRILEWTGSVKDFLRRRNNQFLGI
KGTLAKEISELSVSEDAKQHTTAVVEFQKPLTASTLKKPRKEVVSPFKGKESLRQYFLRH
PSLGKSPEAQRKQQDDIEKVAFHTLLVLLNPIVSNYLKRKRFHQVCLEEMPWRSQMNVYI
AITHFNLFKKRLEEQYSIGVCSLQHLNSYDVLDPEILSLNNSGIIVVREGTDDNIGALSH
LLIKRTQSGSTRKITDPDKSSEHSIKFSEADTPRSQMTNDTELSITLSTREHERPMSNAI
LLEHFTKTFLHLRRAVVLAHRGGHWTLLQNTCRELWNYSQEVLSIAKHSHSLQGLFPITR
NFLISTIWLPFYLASDTILDMIIELQTSNSLKIFDPEGDFCVPSCVGGIADEDGGSNLTF
CCLLDDINVVDLRWICGLVLRTIELLYQMKKWEALVHIALHFNTITHERYAEQVTPLLIY
AQRQLLERIQQFGGPDSPQPHFIKYLGDNADKINCRNFIGKQLRVASRFNEVTVSGHHFV
PEMPVIYTDGSQAQSLVCVPLDVTDTLKCFRETLEKSKYHSRALRHSRKLLSLFLAHTQD
TFGRVPYRISSNEKVEFSVGAELTFLPKPHDLSQEKFNFPSMVESRPLPESQLSVVVSSY
EKTIEILQINNQRDLKVQALHELGNLHFYAGKKRAAFKYWCQALDETLNIADVLNNWQEL
DGFSKNVTDDFTDGSSKHFSEKCIYQAGIWGCLHAAVLAAKIAQYILTSNVRLRTKCCIF
SAILFKTLFRVSIPHPTADCDFAQYEIHKLIPGIDLFSDRYRADVSTVVASLSFLIFELH
CAKQNLIVLPLFTLYQYFVSEICRDPVKCIEGRILKIKVLTDLGFFAEAFHELCLLNHGE
KIPWKVPAGYKLIGKMMSFQKFNSSKPLLTNANLQVLEEVFNWSLPPAVVSMCDQQIMNK
LTLAKMHFIICLSATINSIPEKVIKTIYSVDNTNLKKPSRIMESSIKINAEVTRHQEQSS
IIMQLVRCKDELNMTMLKGILLTETEERLNYLVANIQNEYDRKISHCSAVELETVIEAKL
QLAAISQQRHQTAFSAALAFSAIRLLQDAIIFRKNVPHIQLNIQQTEHRDSYVDSTRLPC
NVIAQEHMNIRLWLRCRMALVTALTAQIRGICDMKENDMNDCSSLINEVIIEAEAFSDIE
TQAEVMVQAVILDLQERRPVTGIKLRLQDIINLLQEKPFISPMASLTLVKSMLLLADILT
TQMDEDTEHHSSAVERLNLLILAHKFTIKQIFTLGESIEQCIEDPALTSPVVPLKNNYLP
AINVLAKVKMRIAHALAQEVSCTSKRENPLQWLPALSHLETALDLCRTSATRELDLEAEI
LFQKGKVERQIIEAGNNKSPRAAETLLNAIKVSQRNDQNFGLIRKSYLEIALLYFHLATY
KEEASQTVKIEASKTKTTPKEHLASMKRISHVTEVYRAQAWIAIRAATQVSEAMLASQLL
IGKKSVKGNEVKAATQQNIPEFAYMDLLASYKDFLSDEYGYEVRYKNLMAPSLKNEEIIQ
SEKDQIESEGTACNISKDNQRKQTITWVHLIRYHNYLIRYNMSPLFVVSKSTPGPFSMED
ALFTSVFDTGIVLRLAEMHFFLKKHLYIYSTCCLEDFPKQLQFLEKPGVSLAAIPVKVSP
EIPGAPHKMSTVRIASTVSFSTDTDIQLDNKATIAPNKELCIQWYIPSLEKGTKDMETMV
LLLYAYNTNYVKIVSIKTFNSVNVFSGHLWIPLTRIISLREKLSNVKQHIEILVQSSTSF
PLQVQSERQKRVPSKKSKINLAKVQFDEKTEEMLKQCLSEVKALLCIVPDLSSPLTEVPF
DVTLQSIKNLEKMFDPANGCSIAGGSLFNWIVSLLP
NT seq
8931 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaggtcagtctgctaaggtgctggaatacctattgtgggccagcatatgtatg
gaatcatcagtcccacttttagctgtacactatttgacatggagagctaccctttacact
gcagtttgttattgttattatgactgccaagccagcatccatggagaggtattcgctcgt
cgtggtctgagtaaaattgatgaactaaagcaattggaaagcataagttcttcagcacaa
aattcagaaacaaaaaaagtttttagagaggccactataaagatggcagtaatggttttc
aagagagcagtatatgaatccagaagaaagcccaaaggattttttcgaccaaaattaagg
gttaatctaaaagaagcacaaaatttgccatggcctcgtactgttacagaacggctgctg
acagagatgtttgatggcactgcagcccatttccttgccatcttagaagctctctctgat
agtaatcgacaagtgttgcgccctgccccacttgttcctgaggaaacggagattcgtgat
gtggtttcagagcttttttttgcaggcatggatatcctggcaggtggtggcagctttgct
agtacacaagaaaggtattgtactgagtcttctggtgtaataaatgcgtcatcaacactt
ctgcagctgatattaacagggaaaaatggtgtttctggagaagctgctatgaagtttata
aagttagctttcagctatgaagagtgggatgtatttgattctactgttggactgattgtt
aattttcttcagaatcaagatgatccaatatggaagaaagctgaaatggaactcaggctg
cttattgcaatgcagcctctagtgtctacaagaagatctaaacatggcctctctctccag
gaacatagtttcaaggaagccacaatatctcgcagttctggaagaagaacaattgcactt
caagaagcatccctaaagcctggagacccatctgatgatcttgtcactttggcaaccaca
ctgttttcctgcgtacgtacatctaagcagactctccaaccagataaagaaatacttgtt
gatatagtaaagtttctgtggcagaagtgcaaagtaggagttcagcggatccaaatgagt
ggaagtgcctacttaaaatatatctacaaattcaaagcttacagatgggttcacatactt
tggataataaatgaagtaattcacagcagtaacataggagatgctaatgttgtagtactt
gcagaggtcacattacgtctgactgcgatattggagaacatagttgactgtgcaaataaa
tctgcaaaaacagcaggagaaaaaaatgaatcagtattaccttcgcaaactcgtatctct
gacattcctgaaatactgaagaaaagccctgcagaacagttacattttgcttatgaaaat
cttgaaaaagcaattaatggaatgaacatgtctcgcttaatgaccattttaccagatgga
aaatcagtacttgacacctactgtacaaagaattcaaatggccaaaatctgaatacttct
tcagcatatggtaatgataagccagtcccaggaaacaattttgtgatggatttacacttg
gagcttattcaggctcaacacagagttgctgtgaaacttcttaacatgaaacaaggtgtt
caaatggatggcaaaaatctcaagtctactaagtctcctgggaaagatgtaaattgcctt
catctcttcacagaatcagatataatgaataaaatcaaaaagaataagttatccaaagct
atcttcctgatgcagaaggctgtattgatgttccctaaaggatcaaccagttctttccaa
aagcacctcctcgaggatgcattagctttaattcagaaggttgaagctgaacaaaatgca
ttgtgctccaatctgaaacaagctatgactagtaagaagaacagaatcccccctcctcct
ctgttgctttccagatcacattgctccatgacatttaaaccagccccattcacctcagat
gttcaggtttcctggtacagtattttgggctgcgtagcagcaggaagcaatttaaaagta
aggttaaataatcatcatcttccaaatgcaggagaagagataccagctgatggaaaaagc
cttctggaaataaaaggcttagatcccaatgaaaagtacatatttgcagttgcagcatac
tcctcggatggaaagcttattggtgatgccattggggaaacaactaaaccaatccttgct
tatccaccactttctgctactaccgctcgagcatacctgactcagattgcctatcagaca
gataactatgcattagccaaaaaagcattttcaccaatgtgggactattttgtcttggct
ccttcaacaccatctgctgatctagcagttatttctgatagcaacaatttgactatatct
cagaacagattatgtcttgatgctgtatctcagacttctccaatcctcttgcacctcttt
cttaggagcatttttattattaatgagattaatgttaaggaaggagcactcttctgtgat
tccatttgttcgaaagagattctgtacaatggacaagttgctagactagctgaatgtgag
agaatggtagtggcgattgaactcagtaattggttaaatgatgcaaattatgccctgcaa
tctgttgttcaatgttatggtctccttgctccgattatctatcacaagattgcttcagtg
ccagtagttcagatcctcatcaaatgtctaacagtcctgcaagaagtcccaagttctacc
ttacagaggaaacagactggttgttatgaaagtatacagcatatgatagcttgctcctcc
ttttatacagcacaggtactgcgttcatggaaagaatatgaactagcattaattattatt
aactatgggaaaaagttgttggattcctcacaaacatcccagggacagtctaaattcaat
agtattgaagaaatgcaaattgacacagaaacagaagatgagagtccttacagtaaaaag
aagtcacaagcagctgcagttgaaaaagcagctgagaacctaacagctctggaatcaaac
ctcctcaaattgacaagaccaggaaaggggttatcttgtagatcctttttgggtttaggt
actggaccagagattacaggacaagaagatcctttttttctctaccctataatttcatgt
tggacagcaaacaatgcctacagggaagtaatgaaattcaggaagaaacctcgtttcctt
gagttctttgttcaagttttgcacaaagcactgaatgaagagaaatttcagcgaatcctg
gaatggacaggcagtgtgaaagatttcttaagaaggaggaataaccaatttcttggtatc
aagggaactttggcaaaggaaataagtgagctcagtgtatctgaagacgcaaagcagcac
acaacagcagtagtggagttccaaaaacccctaacagcatcaactttgaagaaaccaaga
aaagaagtagtgtccccctttaaaggaaaagagagtcttagacaatatttcctgagacac
ccaagtctggggaaatctccagaagcacaaaggaaacagcaagatgacatagaaaaagta
gcttttcacaccctgctggtactgctgaatccaatagttagtaattacttaaaacgaaaa
aggttccatcaggtatgtcttgaggagatgccctggaggtctcagatgaacgtttatata
gcaattactcacttcaatttgtttaaaaagaggctggaagagcaatatagtatcggagtt
tgcagtttacaacatctgaacagttatgatgttctggaccctgaaatactctcattaaat
aattctggcatcatagttgtgagagaaggaacagatgacaacataggagcactgagtcac
ttgctgattaaaagaacacaatcaggaagtaccagaaaaataactgatcctgataaatct
tctgagcacagcattaaattcagtgaagcagatactcctcgatctcaaatgacaaatgat
acagagttatccattactctttccaccagagaacatgaacggcctatgtctaatgccatt
ctgttagagcatttcacaaaaacctttctgcatttaagaagagcagtggttctcgctcat
cgtggtggccactggacattgcttcaaaatacctgccgagagctttggaactatagtcaa
gaagtgctgtcaattgccaagcattcacattctcttcaaggattatttcctattaccaga
aattttcttatcagcactatctggttgccattctatttggcatcagatacgattcttgat
atgataattgaactacaaactagtaattcccttaagatttttgatcctgaaggagatttc
tgtgttccaagttgtgtaggaggaattgctgatgaggacggtggttctaatcttactttt
tgctgccttcttgatgatatcaatgtggttgatttgagatggatatgtggtctggtactt
agaactatagagctcttataccaaatgaagaaatgggaagcactggtacatatagcgttg
cattttaacacaattacacatgagagatatgcagaacaagtgactccgctgctgatatat
gcacagagacaacttctggagagaatacagcaattcggaggcccagatagtcctcagcct
cattttataaaatacctgggtgataatgcagacaagataaattgcagaaacttcattgga
aaacagttgcgtgttgccagcagatttaatgaagtgacagtttctggacaccattttgtt
cctgagatgccagttatttatacagatggcagtcaagcacaatccttagtttgtgtccct
cttgatgtgacagacacactgaaatgtttcagagaaaccctagaaaaatctaaataccac
agcagagcacttagacacagcagaaaattgctttcactatttcttgctcacacacaagat
acctttggaagagtaccctatcggatctcttcaaatgaaaaagtggaatttagtgtggga
gctgaactgacatttctaccaaaaccacatgacctttctcaagaaaaatttaatttcccc
agtatggtcgaaagcagaccattacctgagtcacagctctcagtagttgtctcttcatat
gaaaaaactattgaaatccttcaaataaataaccagagagacctcaaggtgcaggctcta
catgaacttggaaatcttcacttttatgcaggaaagaagagagctgcttttaaatactgg
tgtcaagcccttgatgaaacacttaacatagctgatgtacttaacaactggcaagagtta
gatggcttttcaaaaaatgttactgacgactttacggatggaagttctaaacattttagt
gagaaatgtatttatcaagctggaatttggggatgcttgcatgcagcagttttagcggct
aagatagctcagtatatactgacatcaaatgtgagactaagaactaaatgctgcattttc
tctgctatactctttaagacactttttagagtctctattccacatcccacagctgattgt
gactttgcacaatatgaaatacacaaacttattccaggcattgatttgttctctgatcgc
tacagagccgatgtctccactgtagttgcaagtctgagtttccttatatttgaattgcat
tgtgcaaagcaaaatctaatagttttgccattgttcacattgtaccaatactttgtttct
gaaatttgtcgggacccggttaaatgtattgagggaagaatcctcaagattaaagtactt
acagatttaggattttttgcggaggctttccatgaactatgtctgctcaatcatggcgaa
aaaattccctggaaagtacctgcaggctacaaacttattgggaaaatgatgtcttttcag
aaattcaactcatcgaaacccctcctgacgaatgcaaacttacaggtactagaagaagta
tttaattggagtctacctccagctgtggtttcaatgtgtgatcaacaaatcatgaataaa
ttaactttggccaaaatgcatttcatcatttgtctttcggcaacaataaatagcattcct
gaaaaagtgattaaaacaatctattctgtggataacactaacttaaaaaagccaagcaga
atcatggagtcaagcataaaaattaatgctgaagttacaagacaccaggaacaaagcagc
attattatgcagctggtcagatgtaaagacgaattaaatatgactatgctaaaggggatt
ttattgacagaaactgaagaaaggcttaactatcttgtagccaacatacagaacgaatat
gacaggaagatttctcactgttctgctgtagaattagagactgttattgaggccaagctt
cagcttgcagctatttctcagcagagacatcaaactgctttcagtgctgctttggctttc
tctgcaattcgacttcttcaggatgcaatcattttcaggaagaatgttccacatattcag
ctaaatatacagcaaacagagcatcgagattcttatgtagacagtactcggctgccttgc
aatgtaatagcacaagaacatatgaacatacgtctgtggctgagatgtcgcatggcatta
gtgactgcactaacagcacagatccgtggcatttgtgacatgaaagaaaatgacatgaat
gattgctcaagtctaataaatgaagtaataatagaagcagaggccttcagtgacattgag
acacaggctgaagtgatggtgcaagctgttatacttgacctgcaagaaaggcgcccagtg
actggcattaagcttcgtctgcaggatataattaatttactccaagaaaagccatttatt
tccccaatggcttctttaacactagtgaaaagtatgcttctgctggctgacatattgaca
acacaaatggatgaggatacagagcatcactcttctgcagtcgaacgattaaacttgtta
attctggctcacaaatttaccattaaacagatttttacccttggagaatcaattgaacag
tgcatagaagaccctgcattgacaagtcctgtggttcctttgaaaaataattacttgcca
gctatcaacgtactggcaaaagtcaaaatgagaattgcacatgcattagctcaagaagta
tcttgcacatctaaaagagagaatccattacaatggttacctgctctcagtcacttagaa
acagcattggatctttgcagaacatccgcaacaagagaattagatttggaagcagaaatt
ctgtttcagaaaggtaaggtagagcgccagattattgaagcaggtaacaataagtcacca
cgagctgctgaaaccctgttgaatgccataaaagtgagccagcgaaatgatcaaaacttt
gggctgataaggaaatcctacctggagatagcactgttatatttccatttggctacatat
aaggaagaagcttcacaaactgttaagatagaggcatccaaaacaaagactactcccaaa
gaacacttggcttctatgaagagaatttcccatgtaactgaagtgtacagagcacaggcc
tggattgcaatcagagcagctacacaggtcagtgaagctatgcttgcttctcagctatta
attggaaagaagagtgttaaaggaaacgaagtgaaagccgcaacacaacagaacatccca
gaatttgcttatatggaccttcttgcttcatacaaagattttttgtctgatgaatatgga
tatgaggttcgctataaaaaccttatggccccttctctcaaaaatgaagaaatcatacaa
agtgaaaaggaccaaatagaaagtgaaggaacagcatgtaatatctccaaggacaaccag
aggaaacaaactataacatgggtccatttaatccgctaccataattacttaataagatat
aacatgagccctctctttgttgtctccaaatcaacacctggaccattttctatggaagat
gcactgttcacttctgtttttgatacaggaattgttctacgtttagcagaaatgcatttt
ttcctaaaaaaacatctgtatatatattcaacctgttgtcttgaagattttccaaaacag
ctgcagtttttagaaaaaccaggtgttagtctggctgctattcctgtaaaggtgtctcca
gaaattcctggagccccacataagatgtccacagtgagaatagcctccactgtttctttt
agcacagacacagacattcagctagacaacaaggcaacaattgctccaaacaaggaactt
tgcatccagtggtacattccatctctggagaaaggaacgaaagatatggagactatggtt
ttgctgctttatgcttacaatacaaactatgtcaagattgtcagcatcaagactttcaat
tcagtcaatgtgttttctggtcacttgtggattccactgactagaattatttccttacgt
gagaaattgtctaatgtgaaacagcacattgaaatattggtgcagtcatctacaagtttt
cctttacaagtacaaagtgaaagacagaaacgagtgccttcaaaaaagtccaaaattaat
ctcgcaaaggtgcaatttgatgaaaaaacagaagaaatgcttaagcaatgtttgtctgaa
gtaaaagctttgctgtgtattgttccagatctgtcatctccattaactgaggtcccattt
gatgttactttgcagtcaataaagaatttggagaaaatgtttgatcctgctaatggatgt
tcaatagcaggaggaagccttttcaactggattgtatctctgctcccttga
DBGET
integrated database retrieval system
