Dermochelys coriacea (leatherback sea turtle): 119850501
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Entry
119850501 CDS
T09064
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3 isoform X2
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119850501 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcc03019
]
119850501 (DROSHA)
03009 Ribosome biogenesis [BR:
dcc03009
]
119850501 (DROSHA)
03036 Chromosome and associated proteins [BR:
dcc03036
]
119850501 (DROSHA)
Enzymes [BR:
dcc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
119850501 (DROSHA)
Messenger RNA biogenesis [BR:
dcc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
119850501 (DROSHA)
Ribosome biogenesis [BR:
dcc03009
]
Eukaryotic type
90S particles
RNase
119850501 (DROSHA)
Prokaryotic type
rRNA processing factors
119850501 (DROSHA)
Chromosome and associated proteins [BR:
dcc03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
119850501 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
YcaO
Motif
Other DBs
NCBI-GeneID:
119850501
NCBI-ProteinID:
XP_038244518
LinkDB
All DBs
Position
2:125824665..125938451
Genome browser
AA seq
1334 aa
AA seq
DB search
MSFHSGRGCPRGRGGPGVRTSTQTFRPQNLRQLHPQQPSVQYQYDQQVAAPTTYSSPPAT
GYVPPRPDFIPYPSLVPPSTQSPISQCPLRPPFPNHQVRQSFPVPPCFPPAPPPVPNPSN
SPVPGAPTGQNTFPYMMPPPAMPHPPPPPVMPQQVNYQPVYSTGYSQQSFPPPNFNSYQH
NSNSFQSSSSNSSSSSHFRHTSQYQVEKAQSERRSPERSKHYDEHRHREHSHMHGDRHRP
SNHGDRRGDRGRSPDRRRQESSRHRSDYDRGRTPPRHRSYERSRERERERHRHRDSRRSP
SSERSYRKDYKRTGSRSPSRERKRPRWEEERERWSENQSASKEKSYTAIKDKEPEDIISE
KNEEEEEELLKPVWVRCTHSESYYSNDPMDQVGDSTVVGTSRLRDLYERFEEELGKRQAK
AKAARPPWEPPKTKLDEDLESSSESDCDSDDNSSCSSSSDSEVFDVIAEIKRKKAHPDRL
HEELWYNDPGQMNDGPLCKCSAKARRTGIRHSIYPGEEPIKPCRPMTNNAGRLYHYRITV
SPPTNFLTDRPTVIEYDDHEYIFEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPE
NFCVRGLELFSLYLFRDILELYDWNLTGPSFENNSCPRFHFMPRFVRFLPDGGKEVLSMH
QILLYLLRCNKPLVPEEEIANMLQWEELEWQKYAEECKGMIVTSPGMKPSSVRIDQLDRE
QFNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQADKQKLSQ
REEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMHLD
KLIGYTFQDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMRKK
GINTLINIMSRLGQDDPTPSRINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYR
TAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEEA
KHLFGRLLFNDTDLQEVWLNYPLHPLQLQESNTDRQLIETSPVLQKLTEFEEAIGVIFTH
VRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSS
LVNNRTQAKVAEELGMQEFAITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTF
MNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTV
AVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWERE
HQEREPEETEEVRK
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccattctggacgaggatgcccacggggtcgaggaggacctggagtaagaacg
tcaacacaaaccttcagacctcagaacttgagacagcttcaccctcagcagccttcagtg
cagtaccagtatgaccaacaagtagctgctccgactacctactcaagccctccagccaca
ggctatgtgcctcctaggccagattttataccgtatccatccctggtacctccttcaact
cagagtccaatcagccagtgtcccctgaggccaccttttccaaaccatcaagtaaggcag
agttttccagtccctccttgtttccctcctgctcctccaccagtcccaaatcccagtaat
tccccagtaccaggggcccctactggacaaaacacttttccctatatgatgccacctcct
gcaatgcctcatcctccaccaccaccggtgatgccgcagcaagttaattatcaacctgtc
tactctacaggctattcgcagcagtctttcccacctcctaattttaatagttatcaacat
aactcaaactcctttcagagcagcagcagcaatagcagcagtagcagtcatttccggcac
acaagccaatatcaggtagaaaaggcccaaagtgaacgaaggtctccagagaggagtaag
cactacgatgagcaccggcaccgcgaacatagtcacatgcacggggacagacaccggccc
agtaaccatggggatcggcggggggatcgaggcaggagtcctgacaggagaaggcaagaa
agcagtcggcacaggtcagattatgacagaggaaggactccacctcgccacagaagttat
gaacgaagcagggaacgggagagggaaagacataggcatcgtgatagccgaagatcacca
tcttcagagaggtcctacagaaaagattacaaaagaacagggagccgatcccccagccgg
gagagaaagagacctcgatgggaggaggagagagagaggtggtcagagaatcagagtgcc
agtaaagagaagagttataccgctattaaagacaaagagccagaggacatcatttctgaa
aaaaatgaagaggaagaggaagaattgctcaagcctgtatgggttcgttgtacccattca
gaaagctactattcaaatgaccctatggatcaagtgggggactccacggtggttggaaca
agtcggctccgagatttgtatgaaaggtttgaggaggagttaggaaagcgacaagcaaaa
gccaaagcagcccggccaccatgggagccaccaaagaccaaactcgatgaggatttagag
agttccagtgagtccgactgtgactcagatgacaatagcagctgttctagcagttcagat
tctgaagtgtttgacgttattgcggaaattaagcgtaaaaaagctcaccctgatcgtctt
catgaggagctctggtacaatgaccctggacagatgaatgatggaccactgtgcaaatgc
agtgctaaagccagacgaacaggaataagacacagcatttatcctggtgaagagcctatt
aagccatgccgtcccatgaccaacaatgctggaagactgtaccactatcgaattacagtg
tcacctcccacaaacttcttaacagacaggccaactgttatagaatatgatgaccacgag
tatatctttgaagggttttccatgtttgcacatgccccactgacaaatattcctctatgt
aaagtaatcagatttaacattgactatacgattcatttcattgaagagatgatgcctgag
aatttttgtgtgagaggacttgaattattctctttgtatctattcagagatattttggaa
ctctatgactggaatcttacaggtccttcatttgaaaacaattcttgtccaagatttcat
ttcatgccacggtttgtgaggtttcttccagatggagggaaagaagtgttgtcaatgcat
cagatcctactctatttgttacgatgcaacaaacctttagtcccagaggaggagattgcc
aatatgcttcagtgggaagagctggaatggcagaaatatgcagaagaatgcaaaggaatg
atcgttaccagtcctggcatgaaacccagttcagttcgtattgatcaactggaccgtgag
cagttcaaccctgatgtgattactttccccattattgttcacttcgggatacggcctgct
caactcagttatgctggagaccctcagtaccaaaagctatggaagagctatgtgaagctg
cgccatctgctggctaacagtcccaaagtcaaacaggctgataaacagaagttatcccag
agagaggaagcgctacagaaaatcaggcagaaaaacacaatgagacgagaagtgaccgtg
gagttaagcagccaaggattctggaaaaccggcattcgttctgatgtctgccagcatgca
atgatgcttcctgttctcacccaccatattcgctaccatcaatgtctgatgcatttggat
aagttgataggctacacttttcaagatcggtgcttgctacagcttgccatgactcatcca
agccatcacctaaacttcggaatgaatccggaccacgcaagaaattccttgtccaattgt
gggattcgacagcccaagtatggagaccgaaaagtccatcatatgcacatgaggaaaaag
ggaataaacactttgataaatattatgtcccgccttgggcaagatgatcctactccttcc
aggattaaccacaatgaacgtttagaatttttgggagatgctgtggtggaatttttaact
agtgtccatttgtactacctgtttccaagtctagaggaaggggggttagctacatatcgc
actgccattgttcagaaccagcatcttgctatgctggccaagaagctggaactggatcgg
tttatgctttatgctcatggacctgacctttgtagggaatcggatctacgtcatgcgatg
gccaactgttttgaagccttaataggagctgtttacctggagggaagcctagaagaagcc
aaacacttatttggacgtttactctttaatgacacggacctacaggaagtatggcttaat
tacccactacacccactccaactgcaagaatccaacactgatcggcaacttatcgagact
tccccagttctccagaaacttaccgagtttgaggaagcaattggagtcatttttactcat
gttcgacttctggcgcgggccttcactttgagaactgtgggatttaaccacctgactcta
ggccacaatcagaggatggaattcctgggtgactccataatgcaattggtagccactgag
tacttattcatacatttccctgatcatcacgaagggcacttaacgttgttgcgaagctca
ttggtgaacaacaggacacaggccaaagtagcagaagagctgggtatgcaggaatttgcc
atcactaacgacaagaccaagagacctgtggctcttcggactaagactttggctgatctc
ttggagtcttttattgctgcactttacattgataaggatttggagtatgttcacactttc
atgaacgtgtgcttttttccgcgattaaaggaattcattttaaatcaggattggaatgac
cctaaatcccagcttcagcaatgctgcctgactctcaggacagaaggaaaagagccagac
attcctctctacaagaccctgcagacagtgggaccttctcatgccagaacatatacagtc
gctgtttatttcaaaggggaaagaataggatgtggtaaaggcccaagtattcaacaagca
gaaatgggagctgctatggatgcgcttgaaaaatataactttccccagatggcccatcag
aaacggttcattgaacggaaatacagacaagagttgaaagaaatgaggtgggaaagagag
catcaagagagagagccagaggagaccgaagaagtaaggaaataa
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integrated database retrieval system
