Dermochelys coriacea (leatherback sea turtle): 119850836
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Entry
119850836 CDS
T09064
Symbol
SMARCC1
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF complex subunit SMARCC1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119850836 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcc03021
]
119850836 (SMARCC1)
03036 Chromosome and associated proteins [BR:
dcc03036
]
119850836 (SMARCC1)
Transcription machinery [BR:
dcc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119850836 (SMARCC1)
Chromosome and associated proteins [BR:
dcc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119850836 (SMARCC1)
PBAF complex
119850836 (SMARCC1)
GBAF(ncBAF) complex
119850836 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
HEAT_GCN1
DUF919
SpeFL
BRCT_2
Motif
Other DBs
NCBI-GeneID:
119850836
NCBI-ProteinID:
XP_038245431
LinkDB
All DBs
Position
2:complement(268706429..268895384)
Genome browser
AA seq
1174 aa
AA seq
DB search
MRRDSRLLASAWSAAQGADAEAVAARGAGWGTGACTAVAGAGSGIPEHAPRGGAYRARRM
RGGRRVGGAGPRWRRSARVTMAAAVTAGGGPGPGAAAGLAALSVSRRKDGGPTGKFWESP
ETVSQLDAVRVWLGKHYKKYVQADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPA
KCFMDFKAGGTLCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLS
RPTIYLIPDIELKLANKLKDIVKRHQGTVTDEKAKATHHIYPNPTSLDDDEWLRPVMKKD
KQVLVHWGFYPDSYDTWVHASDIEAEIEDAPIPEKPWKVHAKWIMDTDIFNEWMNEEDYE
VDENKKPVSFRQRISMKNEEPVRSPERRDRKAAASTRKRKHSPSPPPTPVESRKKTGKKG
QAGLYGKRRGQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVAD
LDEQDEETVATGGKEDEDPNKGDQSRSIDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIE
RRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHA
FLEQWGLVNYQVDPESRPMAMGPPPTPHFNVLADTPSGLMPLHLRAPQVPAAQQMLSFPE
KNKEKPTDLQNFGLRTDVYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSE
HVGGRTQDECXLHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVD
LGWHQLQAKAALEEFSRVREEVPLELVEAHVKKVQEAARTSGKVDPTYGLESSCIAGTGP
DEPEKLDGVEEEKMETETDGQQSEKVESKGESEIEEGDKVQEGENERNPEKEQDSEVASD
TKSEEKEAEENKENVDACKDKESEAGKKKVEHEISEGNVATAAAAALASAATKAKHLAAV
EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQL
KYAELRARQQMEQQHSQNTQQSHQHSSGPGMNPLGAPGHPGMLPHQQPPPYPMMHHQMPP
PHPPQPGQMPGPGSMISGQAMPGRMMPSVSANIHPTSGGPPPSGMPPMSGNIIGPRIPLA
APNGMYPPPSQQPPPPIDGVTPPTAGATPASAAP
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagagatagcaggcttctggcgtctgcgtggagcgcggcccagggtgccgacgca
gaggcggtggcggcgcggggggcggggtggggaaccggcgcgtgcacggcagtggcgggg
gcagggagcggtattcccgagcatgctccaaggggcggggcgtacagggctcggcgcatg
cgcggagggagacgagtgggaggcgcagggccgcggtggcggcgctcggcgagggtaaca
atggcagcggcagtgactgcaggtggcggccccggccccggggcggcggcggggctggcg
gccctgtcggtgtcgcggcggaaggacggcggccccacgggcaagttctgggagagcccg
gagacggtgtcccagctggacgcggtgcgggtctggctggggaagcactacaagaagtat
gttcaggcagatgctccaaccaataaaacattggctgggctggtggtgcagctgctacag
ttccaggaagatgcctttgggaaacatgtcaccaatcctgccttcaccaaacttcctgcc
aagtgtttcatggatttcaaagctggaggtacattatgtcatattcttggtgctgcttac
aagtataagaatgaacagggctggcggaggtttgatctgcagaatccatcgcgaatggat
cgaaatgtggagatgttcatgaacattgaaaaaacactagtgcagaataattgtctgagc
agaccaacaatctacctcattccagatatcgaactgaagttggctaataaactaaaggac
attgtcaaacgtcaccagggaaccgtcactgatgagaaggcaaaggccacccaccatatt
tatcctaatcctacctcactggatgatgatgaatggttgagacctgtgatgaagaaagat
aagcaggtgttggtgcactggggcttttacccagacagctatgatacttgggttcatgct
agtgatattgaagctgaaattgaagatgctccaattccagaaaaaccatggaaggttcat
gccaaatggattatggacacggatatattcaatgaatggatgaatgaagaggattatgag
gtggatgagaacaagaagccagtgagttttcgccagcgaatctctatgaagaatgaagag
cccgtccgtagccctgagagaagagaccggaaagcagcagcaagtaccaggaaaagaaag
cattcaccttcccctccccccactcccgtggaatcaaggaagaagactggaaagaaagga
caagcaggactgtatgggaaaaggcgaggtcagaaagaagaggatgagcaagaagatctt
accaaggacatggaggacccaacacctgtaccgaacatagaagaagtggtacttcccaaa
aatgtgaacccaaagaaagacagtgaaaacacaccagtgaaaggaggaacagtagcagac
ctagatgagcaggatgaggagacagttgctacaggaggaaaggaagatgaagatcccaac
aaaggtgaccagagtcgatccattgacccaggtgaagacaatgtcacagaacagaccaat
cacataattattccaagctatgcatcatggtttgactacaactgtattcatgtaattgaa
cgccgtgctcttccagagttcttcaatgggaaaaacaagtccaagactccagaaatatac
ctggcttaccgtaacttcatgattgatacgtatcgcttaaaccctcaggagtacttgacc
agcactgcctgcagaaggaacctgactggagatgtatgtgctgtaatgagagtgcatgct
tttctggagcagtggggtctagttaactaccaagtggatccagaaagccgtcccatggca
atgggccctcctcctactcctcacttcaatgtgcttgctgatactccctctggacttatg
cctcttcatctccgagctcctcaggtccctgctgcccagcagatgttgagctttcctgag
aaaaacaaagaaaagcctactgaccttcagaactttggacttcgcacagacgtttattca
aagaagaccttggcaaagagtaagggagccagtgctggaagagaatggaccgagcaagag
acactgttgctactagaggctctggagatgtacaaagatgactggaataaagtctctgag
cacgttggaggtcgcacccaggatgaatgcnatctccactttctgagacttcccatagag
gacccttatctggagaactctgatgcatccttaggcccattggcttaccaacctgtacct
ttcagccagtctggaaacccagtgatgagcactgttgcttttttggcatctgtggtggat
ctcgggtggcatcagctgcaagctaaagctgctttagaggaattttctcgggtccgagag
gaggtaccactggaactagttgaagcccatgtcaagaaagtgcaggaggcagcaagaacc
tctgggaaggtggatccaacatatggactagagagtagctgcattgctggaacaggtcca
gatgagccagagaagcttgatggagttgaagaagaaaaaatggaaactgagacagatggg
caacagtcagaaaaggttgaaagcaaaggagaaagtgaaatagaggaaggtgataaggtg
caggaaggagaaaatgagagaaatccagaaaaggagcaggacagtgaagtcgcttctgat
accaagtcagaagagaaggaggcagaagagaacaaggaaaacgttgatgcgtgcaaagac
aaggaaagcgaagctggaaagaagaaagtggaacacgaaatctctgaaggaaatgtagct
acagctgcagctgctgctcttgcctcagctgccaccaaagcaaagcacctagcagcagtg
gaagagcgaaagatcaagtccttggtagccctcttggtggaaacacaaatgaagaaactg
gagatcaaacttcgtcattttgaagagctggaaacaatcatggacagagaaaaagaggca
ttagaacagcagaggcagcagttgctgacggagcgacagaacttccacatggagcagctg
aaatatgcagagttaagggctcgccagcaaatggagcagcagcacagtcagaacacacaa
caatcacaccagcattccagtgggcctggcatgaacccacttggggcaccaggtcatcca
ggcatgctgcctcatcagcagccccctccataccctatgatgcaccaccagatgcccccc
cctcatccaccacagccaggacagatgccagggccaggttcaatgatatctgggcaggcc
atgccaggccggatgatgccatctgtgtccgccaacatccacccaaccagtggtggccct
cctccatctggcatgccaccaatgtcaggaaacataattggacctcgtattcccctagca
gcccccaatggcatgtatccccctccatcgcagcagccaccaccaccaattgacggggtg
actccacctacagcgggagcaacgccagcctcagcagctccttaa
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integrated database retrieval system
