Dermochelys coriacea (leatherback sea turtle): 119850858
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Entry
119850858 CDS
T09064
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcc04131
]
119850858 (VPS50)
Membrane trafficking [BR:
dcc04131
]
Protein recycling
Others
EARP complex
119850858 (VPS50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
SAC9_GBDL_2nd
Motif
Other DBs
NCBI-GeneID:
119850858
NCBI-ProteinID:
XP_038245507
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Position
2
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AA seq
986 aa
AA seq
DB search
MQKIKSLMTRQGLKSPQENVHDLSPVENFRIPSKEELRELREQPTDPQAQQEIINSIEEV
YFSNDSFDIVKYELEKLPPVLSLQEIEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNVAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDIHHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNS
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDRDEGTASSSV
SDGNNVIGAEETNFDRSYVQKKLEHGLSRIWQDVQLKVKTYLLGTDMSNFKYDDFIFVLD
IISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLEELRMFLENETWELCPVKSS
FSILQLHEFKFMEQSRSPSVSPSKQPASAISATITLFEQYCNGGNPFEIQVNSKDDETED
VLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLRSRKRSDY
NLNKVIAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRN
DTPVQSSSLPTSSREQYSARQFESTGLGLSSSRLRTTLNRIQESLIDLEVSTDTTGTLTA
AEERKEKVPSPHLSHLVVLTSGNTLYGLAERVVATESLVFLAEQFEFLQSHLDAVMPAAK
KPFLQQFYSQTVSTASELRKPIYWIVAAKSIDYEQMLLLMANVKWDVKEIMSQHNIYVDA
LLKEFEQFNRRLNEVSKRVRIPLPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQ
LDFQQFLMKLEKLTDIRPIPDKEFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNV
CLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatcaagtcactgatgacccgccagggtctcaaaagtccacaggagaacgtt
catgacctcagtcccgttgaaaattttcggattcctagcaaggaggagctgagagaactc
cgggagcaaccaaccgatcctcaagcccagcaagaaataattaacagcattgaagaagtg
tatttttccaatgattcctttgatattgtgaagtatgagttggagaagcttcctccagtt
cttagtcttcaagaaatagaagaatacagagacaaattaaagcaacaacaagctgctgta
tctaaaaaggttgcagacttgattcttgaaaagcagcctgcatatgttaaggaacttgaa
cgagttacatctttacaaactggtcttcagttagctgcggtcatttgcacaaatggaaga
aggcacctgaatgttgcaaaggaaggttttactcaagctagtttgggacttcttgcaaat
caaagaaaacgacagttgctgattggactgctgaagtctctgagaacaataaaaacactg
caaagaactgatgtacgtttaagtgaaatgttggaggaggaggactatccaggagctatt
caattgtgcttggaatgccagaaagcagccagtactttcaaacactacagttgtataagt
gaattgaattcaaaactgcaagacactttggaacaaatagaggaacaattagatgtagcc
ctctccaaaatatgcaagaactttgatatccatcattataccaaggtgcagcaggcttac
agactacttggaaagacacagacagcgatggaccaactacatatgcacttcactcaagcc
attcacaacacagtgttccaagtagttcttgggtacgtagagctgtgcgcaggaaactcg
gacaccaaatttcagaagctacagtacaaggatctctgcacacatattacatcagacagc
tacattccatgtcttgctgacctctgcaaagcactctgggaagtcatgctcagttattat
cgaacgatggaatggcatgagaaacatgaccgagatgagggaactgcttcgtcttctgtt
tcagatggcaacaatgtgattggagctgaggagaccaattttgaccgtagctatgtacaa
aagaaattagaacatggactttcgcgtatatggcaggatgtgcagctgaaagtgaaaacg
tatctgctggggacagacatgtctaacttcaaatatgatgactttatctttgtactagat
atcattagcaggctgatgcaagttggggaagaattttgtggcagtaagtcagaagttttg
caagaatctattagaaaacaaagtgtgaactatttcaagaattatcacagaactcgtctc
gaagaattgcgaatgttcttggagaatgagacctgggagctttgtcctgtaaagtcgagc
tttagtattttacagcttcatgagtttaaattcatggagcagtcacgttccccgtctgtg
tcgcctagtaagcagcctgcttcagcaatctcagcaaccataactttgtttgagcagtat
tgtaatggaggaaatccatttgaaattcaggtcaacagcaaagatgatgagacagaagat
gtacttgcttctaatgggtatgaatctgatgaacaggagaagagtgcctatcaagagtat
gacagtgacagtgatgttcctgaggagctgaaaagagattatgtggatgagcagacagga
gatgcccctgtaaaaagtgtttctcgagaaaccctgaggagcaggaagcgatcagattat
aatctcaacaaggtgattgcacccatcctaacaaacactacactgaatgtaataagactt
gttgggaaatacatgcagatgatgaacattttgaaaccaattgcatttgatgtgattcac
ttcatgtcccagctgtttgattactatctgtatgcagtgtatacgttttttggccgaaat
gacacgcctgtacagagttcttcacttcccacatctagcagggaacagtacagtgctagg
cagtttgaatcaacaggactgggtcttagtagtagcaggctgcgcactacactaaacagg
atacaggagagcctgattgatctggaggtctctaccgataccactggcactctcacagct
gctgaagagagaaaggagaaagtgccaagcccacacctcagtcatctggtagttttaaca
tctgggaatactctgtatggtttggcagaaagagtggtagccacggaatccttggtgttt
ttggctgagcagtttgagttccttcagtcgcatcttgatgctgtgatgcctgcagccaag
aaaccctttctccagcaattctactctcagactgtgtcaactgccagtgaactacgcaaa
ccaatttattggattgtagctgctaaatctattgattatgaacagatgctgctcctcatg
gctaatgtgaagtgggatgtgaaggagatcatgtcacaacacaacatatatgttgatgct
cttttaaaggaatttgaacagtttaacagaaggttgaatgaggtatctaaaagagtccgt
attccattgccagtgtcaaatattctttgggagcattgtatacgactagccaatagaact
attgtggaaggttatgccaatgtcaagaagtgtagcaatgaagggcgtgccctgatgcaa
ttggacttccagcagtttttaatgaagctagaaaagctaacagacattaggcctattccg
gataaggaatttgtggagacctacattaaagcttactatctgactgaaaatgacatggag
cgctggatcaaggagcacagggaatattccaccaagcagctgaccaatctggtgaatgtt
tgtctgggatcacacatcaacaaaaaagcaagacagaaactgctagcagcaattgatgac
atagacagacctaaaagataa
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