Dermochelys coriacea (leatherback sea turtle): 119851065
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Entry
119851065 CDS
T09064
Symbol
VIM
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119851065 (VIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcc03019
]
119851065 (VIM)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dcc04812
]
119851065 (VIM)
04147 Exosome [BR:
dcc04147
]
119851065 (VIM)
Messenger RNA biogenesis [BR:
dcc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
119851065 (VIM)
Cytoskeleton proteins [BR:
dcc04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
119851065 (VIM)
Exosome [BR:
dcc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119851065 (VIM)
Exosomal proteins of other cancer cells
119851065 (VIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
GAS
TolA_bind_tri
BLOC1_2
DUF7491
TPR_MLP1_2
LAMB4
YwqH-like
DUF1759
Motif
Other DBs
NCBI-GeneID:
119851065
NCBI-ProteinID:
XP_038246209
LinkDB
All DBs
Position
2:230734812..230745700
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AA seq
462 aa
AA seq
DB search
MSTTASSKSSYRRMFGAGSRPSTSGSRYITSASRYSLGSAIRPGSSRLVSSSPGGVYATK
ASALRLRSSLPPTRLIHDTVDFSLADAINTEFKANRTNEKVELQELNDRFANYIDTVRFL
EQQNKILLAELEQLKGKGTSRLGDLYEEEMRALRRQVDQLTNDKARVEVERDNLADDILR
LREKLQEEMIQREEAENTLQSFRQDVDNASLARLDLERKVESLQEEIVFLKKLHDEEIRE
LQAQIQEQHIQIDVDVAKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSEAATR
NNDALRQAKQEANEYRRQIQSLTCEVDALKGTNESLERQMREMEDNFAVEAANYQDTITR
LQEEIQNMKEEMARHLHEYQELLNVKMALDIEIATYRKLLEGEESRITMPIPTFASLNLR
ETNIDSHPMVDTHSKRTLLIKTVETRNGEVINETSQHHDDLE
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgaccgcaagcagcaagagctcgtaccgcaggatgttcggggccggcagccgc
cccagcacctcggggagccgctacatcacctccgccagccgctactcgctgggcagcgcc
atccgccccggcagcagccgcctggtctcctcctcgcccggcggcgtctacgccaccaag
gcctcggccctgcggctgcggagcagcctgccccccacgcggctcatccacgacaccgtg
gacttctcgctggccgatgccatcaacacggagttcaaggccaaccgcaccaacgagaag
gtggagctgcaggagctgaacgaccgcttcgccaactacatcgacacggtgcgcttcctg
gagcagcagaacaagatcctgctggccgagctggagcagctcaagggcaagggcacctcc
cgcctgggggacctctatgaggaggagatgcgggcgctccgccggcaggtggaccagctc
accaacgacaaagccagggtggaggtggagagggacaacctggccgacgacatcctgcgg
ctcagggagaagttgcaagaagagatgattcagcgagaagaagctgaaaacaccctgcaa
tctttcagacaggatgttgacaatgcctctctggcacgtcttgatcttgagcgtaaagtt
gagtccttgcaagaagagattgtcttcttgaagaagcttcatgatgaggaaatccgggaa
ctgcaggcccagattcaggaacaacacatccaaattgatgtggacgttgctaaaccagat
ctcactgctgccctgcgtgatgtccgtcagcagtatgaaagtgttgctgctaagaatctt
caggaagctgaagaatggtacaagtccaagtttgcagacctctctgaagctgctactagg
aacaatgatgccctacgtcaggccaaacaggaagctaatgagtaccgcagacaaatacag
tccctcacctgtgaagttgatgcacttaaaggaactaatgagtccctggagcgccagatg
cgtgaaatggaggacaactttgctgttgaagctgctaactaccaagacactattacccgt
ctgcaggaagaaattcaaaacatgaaggaagaaatggctcgccatcttcatgagtaccaa
gaactgctgaatgtcaagatggctctcgatattgagattgctacctatagaaaactgttg
gagggagaggagagcagaattaccatgcctattccaacttttgcttccctgaacctgcgg
gaaaccaacattgattctcaccctatggttgacacccactcaaagaggacactcttaatt
aaaactgttgaaaccagaaatggagaggttatcaatgaaacttcccagcatcatgatgat
ctggagtga
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