Dermochelys coriacea (leatherback sea turtle): 119851760
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Entry
119851760 CDS
T09064
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc04510
Focal adhesion
dcc04512
ECM-receptor interaction
dcc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119851760 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119851760 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119851760 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dcc04147
]
119851760 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
dcc00536
]
119851760 (COL4A2)
Exosome [BR:
dcc04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
119851760 (COL4A2)
Glycosaminoglycan binding proteins [BR:
dcc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119851760 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
119851760
NCBI-ProteinID:
XP_038248015
LinkDB
All DBs
Position
1:108245826..108472117
Genome browser
AA seq
1755 aa
AA seq
DB search
MNTHKPGGASEGFSWDRKALLLGAPHSLGDEAKMRSSRFLLSRRALWQAMQVVLLLVLAS
LLTGRVKAGGKSYTGPCGGRDCSRGCECFPEKGGRGQPGLLGPQGFPGPPGLMGIPGLEG
HKGHKGERGQPGVTGPKGEVGLRGVTGFPGADGVPGHPGQPGSRGKPGHDGCNGTRGDAG
EQGSQGPSGQPGFFGIQGPKGQKGEPFVMTPELASKFKGEPGEPGLLGFPGPQGTLGIVG
LIGPTGNPGRPGPPGPPGPPGPPGNRGLGFYGEKGEKGEIGPQGPPGLPSTRELIVSPDT
ILVEQYKGEKGIKGETGEPGTPGLPAYSAEDGEEGIIGFPGLRGLPGINGIPGAAGEKGF
QGFDGMPGSSGPKGMKGEQGERGFQGPPVYTQYPIRRKGIRGDPGLPGVPGPAGDLGDQG
DPGLPGLPGSSDGFPDGSERRGLRGEMGPKGFSGEPGFLATKPGPPGSDGKLGLPGFPGP
PGPPGTPGYPFGLKGRQGDPGEAGSRGFPGFRGQKGIKGETGDCKCIESEEARRGPAGPP
GPPGFPGQTGHPGQKGDNGDQGQHGLPGFSGAKGFPGAVGFPGPKGEKGNSRYITTKGTK
GDPGGPGLSGIKGEDGFPGKDGIDGLPGLPGLPGDGVRGSPGDPGYPGTQGENGFPGEIG
LPGAGLPGPKGYRGPSGDSGTYGNPGLQGPPGPRGAPAQLDCNQVTEDLSRGDGTKTVWS
GAECMRAPKGAPGKPGLPGAIGAKGTKGIPGDPGLDGFQGLKGSQGDPGREGLPGPRGFT
GPRGDGGPPGLPGLQGNPGSAGKPGAPGPAGPKGIAGEVLGAAPGTPGDFGPSGFPGLKG
LQGDHGVPGIRGAGGTPGLSGSKGQKGPPGPLGLPGLPGQPGLHGFPGLPGQQGPPGRTG
SPGFVGSLGARGDQGDQGFPGPVGMKGLAGDKGELGNKGVQGIPGVPGLPGIDGMPGFPG
LKGAKGSPGIGGFKGMLGQKGKPGLKGIKGEVGSFGNLGFKGLQGEPGHKGDRGDQGPAG
KPPKIISSMLFEVKGEKGDVGETGLKGGLGFKGSKGMPGLPGKPGVPGLPGSTSHIEGEK
GDAGIKGVTGVQGYPGTIGPPGIRGFPGTTGIRGEKGIEGIRGDYGRPGSAGQTGDRGDT
INLPGSAGLKGEAGVTGSLGVKGTRGDKGEGGDSGFTGIEGLKGTQGFPGLKGQKGFPGL
VGPPGSQGDPGIPGFQGEKGSRGWPGLAGKAGLPGFRGISGLDGLPGSKGLPGSPGPDAY
GTEGFPGIYGDKGEAGKPSTIEGTRGPPGQKGERGNPGERGPTGDLGSDGIPGFPGVSNI
SGIPGDVGSPGLDGVPGYPGPRGRPGILAPAGSKGEDGQIGVLGEDGQKGTRGDPGPPGR
TGISGYPGPKGHKGAQGLMGTLGLVGAFGDTGPTGPKGDRGPTGFQGPPGSPGLPAVPPK
LVTHQGAAGPRGNIGPQGILGEMGPHGPPGDPGFRGPPGKPGFQGRGGMSALPGFRGDQG
PSGFPGLVGFEGEPGRPGNPGLPGMPGRSVNIGYLLVKHSQSEQEPMCPVGMNKLWSGYS
LLYFEGQEKAHNQDLGLAGSCLAHFSTMPFLYCNPGDVCYYASRNDKSYWLSTTAPLPMM
PVAEEEIRPYISRCSVCEAPAVAIAVHSQDVSIPHCPEGWRSLWIGYSFLMHTGAGDEGG
GQSLVSPGSCLEDFRATPFIECNGARGTCHYYANKYSFWLTTINQQFQSLPSADTLKAGL
IRTHISRCQVCMKNL
NT seq
5268 nt
NT seq
+upstream
nt +downstream
nt
atgaacactcacaagccaggaggtgcctcggaagggttttcctgggacaggaaagctttg
ctgctgggagccccgcacagcctgggagacgaagcaaagatgagaagctcgcggttcctc
ctctcacgtcgtgccctttggcaggctatgcaggtcgtgctgctcttggtgttggcctca
ctgttaactggcagagtaaaagctggtggaaaatcttacacaggaccatgtggaggaaga
gactgtagtaggggatgtgaatgtttccctgaaaaagggggtcgtggtcaaccaggacta
cttggacctcagggattccctggaccaccaggattaatgggtatcccaggtttagaaggt
cacaaaggtcacaaaggtgaaagagggcaacctggagtaactggaccaaaaggagaagtg
gggctaagaggagtaactggtttccctggtgcagatggtgttcctggtcatcctggtcag
ccaggatcaagggggaaaccaggtcatgatggctgcaatgggacaagaggtgatgctggt
gaacaaggaagtcaggggcccagtggtcaacctggtttctttggaatccaaggaccaaaa
ggtcagaagggggaaccttttgtaatgactcctgaactagcaagcaaattcaagggagag
cctggtgagccaggattgttgggctttccaggacctcaaggtactctcggtattgtgggt
ttaattggtccaacaggaaatccaggaagaccaggaccacccgggccaccgggaccccca
ggaccaccaggcaacaggggccttggtttttatggagaaaaaggtgaaaagggtgaaata
ggtccacagggccctcctgggcttccatctacgagggagctgatagtttccccagacaca
atcctagtagaacaatacaagggtgaaaagggaataaaaggagaaacaggagaacctgga
actccaggtttacctgcatattcagcagaagatggagaagaaggaataataggttttcca
ggactaaggggattacctggtatcaatggcatcccaggagctgctggggaaaaaggtttt
caaggatttgatggcatgcctggcagcagtggccctaaaggaatgaagggagagcagggt
gagagaggttttcaaggaccacctgtttatactcagtatcccattcgaagaaaaggtata
agaggtgatccaggattgccaggtgttcctggacctgcaggagacctgggggaccaagga
gatcctggccttcctggtcttcctggatcgtcagatggctttcctgatggctctgaaaga
agaggtttacgtggggaaatgggtcccaaaggttttagtggagaaccaggttttctagca
acaaagccaggtccacctggtagtgatggtaaacttggacttccaggattccctggccca
cctggccctccaggaacaccaggctatccttttggactgaagggacgtcaaggggatcca
ggtgaggcgggcagccgaggtttccctgggttcagaggacaaaaaggaattaaaggtgaa
acaggggactgtaaatgtattgaaagtgaagaagctagacggggtcctgctggtccacct
ggtccaccaggttttccaggccaaactggacatcctgggcagaaaggagataatggagat
caaggtcagcatggtcttccaggcttctctggtgcaaaaggatttcccggtgcagttgga
tttcctgggccaaaaggggagaaaggaaattctagatatattacaacaaaaggtaccaaa
ggagacccaggaggtcctggactatctggcattaaaggtgaagatgggtttccaggaaaa
gatggtatagatggcttaccaggtcttcctggccttccaggtgatggtgtaagaggttca
ccaggtgatcctggttatccaggaacacaaggtgaaaacggctttccgggagagattggt
ctgccaggtgcaggcttacctggcccgaaaggataccgtggaccttcaggtgactctgga
acatatggaaatccagggcttcaaggtcccccaggtcctcgaggtgctcctgcccaatta
gattgtaaccaagttactgaagatctttctaggggagatggcaccaagacagtttggtca
ggggcagaatgcatgagagcaccaaaaggagccccaggaaagccaggattgccaggagct
attggtgcaaaaggtactaaagggattccaggtgacccaggtctggatggattccaaggg
ctaaaaggttcacaaggtgatccaggtcgtgaaggattgccaggtcctcgaggttttact
ggaccccggggagatggaggcccaccaggtctaccagggctacagggaaatccaggcagt
gcaggaaaaccaggtgccccagggcctgcaggtccaaaaggaattgcaggtgaagtttta
ggagcagcaccgggcaccccaggagattttggaccatctggattcccaggattgaaaggc
ctacaaggagatcacggagtaccaggaattagaggagctggtggtactccaggtttgtca
ggatccaaaggacagaaaggacccccaggtcctcttggtttgcctggcctgccaggacaa
ccaggattgcatggattcccagggcttccaggacagcaaggacctcccggcagaactggc
tcaccaggatttgttggttcacttggtgccagaggagatcaaggtgaccaaggttttcct
ggtccagtgggcatgaaaggtctggccggtgacaaaggtgaactcggtaacaaaggagta
caaggaatacctggggtgcctggtctcccgggaatagacggaatgcctggttttccaggg
ttaaaaggtgctaaaggttcacctggtatcggaggtttcaaaggtatgttaggccagaaa
ggaaaaccaggactcaaaggaatcaaaggcgaagttggctcttttggcaatctgggtttt
aaaggtctacagggggaaccaggccataaaggtgaccgtggggaccagggtccagcagga
aaaccaccaaagatcatatcaagcatgctgtttgaggttaaaggtgagaaaggagatgta
ggagagactggcctaaaaggaggtttaggctttaaaggtagtaaaggaatgccaggctta
cctggcaaaccaggagttccaggtttgcctggatcaactagtcacattgaaggtgagaaa
ggagacgctggtattaaaggagtgacaggcgttcaggggtatcctggtacaattggacct
cctggcataagaggtttccctggaaccactggaatcaggggtgaaaagggtattgaagga
atcagaggtgattatggtagacctggctctgctgggcaaactggtgatcgaggagatact
ataaacttaccaggaagtgcaggtctgaaaggagaagctggtgtaaccggatcattgggt
gtgaaaggaaccagaggagataaaggtgaaggaggtgattctggttttactggcattgaa
ggcctaaaaggcacccaaggttttcctggtttaaaagggcaaaaaggcttcccagggctg
gttggaccaccaggatcacagggagacccaggtattcctggatttcaaggtgaaaaagga
agtcgtggatggcctggtttagcaggaaaagcaggtttacctgggttccgaggaatcagt
ggattggatggcttgccaggcagtaagggcttgccaggttccccaggtccggatgcatat
gggactgaaggtttcccaggtatttatggtgacaaaggggaagcaggcaaaccaagcact
attgaaggcaccagaggaccaccaggccagaaaggcgagagaggcaatccaggggaacga
ggcccaactggtgacctagggtctgatggaattccaggctttcctggagtttcaaacata
tcaggaatacctggtgatgtgggttctccaggtctagatggagtgccaggctatccagga
ccacggggcagacctggaattttagctccagcaggaagcaaaggagaagatggtcaaata
ggtgtgcttggagaagatggtcaaaaaggaactagaggtgaccctggaccaccagggaga
actggaatttcagggtaccctggaccaaaagggcataaaggcgcacaaggtctcatgggt
actcttggcttagtgggagcttttggtgacacagggcccactggacccaagggggacaga
ggacctactggttttcaaggacctccaggttctcctgggctgcctgcagtcccccctaag
ctggtcactcaccagggtgcagcaggcccacgtggaaatataggtccccaaggcatactt
ggtgagatggggccccacggtccaccaggtgatccaggttttagaggcccaccaggtaag
ccaggattccaaggacgaggtggcatgtcagctcttccaggttttagaggagatcaagga
ccatcaggttttccaggtctggtaggctttgagggtgaaccaggccgtccaggtaaccct
gggctaccaggtatgccaggtcgcagtgttaacattgggtaccttcttgtgaagcatagc
cagtctgagcaagagccaatgtgcccagttggtatgaacaaactctggagtggctacagt
ctactgtattttgaaggacaggaaaaagcacataaccaggatcttgggttggctggatcc
tgtttggctcattttagtaccatgcctttcctctactgtaaccctggggatgtctgttat
tatgcaagccgaaatgataaatcctactggctctcaaccacagcacctcttccaatgatg
cctgtggcagaagaagaaattagaccatatatcagtcgttgttccgtctgtgaagcccca
gctgttgcaattgctgtccatagtcaagatgtttctattccacactgccctgaagggtgg
cgcagtttatggattggatattccttcctcatgcacactggagctggtgatgaaggcgga
ggacagtcactggtttctcctgggagctgtctggaagacttcagagctactcctttcatt
gaatgcaatggtgcccgaggaacgtgccactactatgcaaacaaatatagcttctggctt
accactattaaccagcaattccagagcttgccctcagcagatacgctcaaggcaggtctc
atccgaactcatatcagcagatgtcaagtgtgcatgaaaaatttgtaa
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integrated database retrieval system
