Dermochelys coriacea (leatherback sea turtle): 119851885
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Entry
119851885 CDS
T09064
Symbol
COL15A1
Name
(RefSeq) collagen alpha-1(XV) chain isoform X6
KO
K08135
collagen type XV alpha
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
dcc00535
]
119851885 (COL15A1)
Proteoglycans [BR:
dcc00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
119851885 (COL15A1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Laminin_G_3
3keto-disac_hyd
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
119851885
NCBI-ProteinID:
XP_038248392
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All DBs
Position
2:complement(157225548..157518943)
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AA seq
1291 aa
AA seq
DB search
MLSRHCWWPWNLLLLHWGSFLPVVLAAQVIEERGSKGHLDLTELIGVPLPFSVSFITGYG
GFPAYSFGPDANIGRLTSTLIPQTFYSDFAIVVTVKPNSDDGGVLFAITDAFQKTIYLGM
RLSPVDDGTQRIIMYYTEPGSYISREAASFKVPVMTNKWNRFTVTVQGNDTVLFMDCEEY
NRVQFQRSSQALQFESNSGIFVGNAGATGLEKFTGSIQQLLIKPDPRATEDQCEDDDPYA
SGDSSGTGSIQEQEGVPEAQEVIASSQTLPEERTAEPVGAPPTVSVQSEEMDFSGHHILD
ETLEPPTIKEQGSTNAGNNQHESETTTVAQEILKPEAGSGAIVLQGVSREKGQKGERGEK
GEQGPQGPPGPPGKSELEEMQTGIQGPPGPLGKPGRDGEPGIPGKDGLPGERGLQGLPGL
KGEDGLKGEKGEPGVGLPGPPGLPGLPGPSAPFRGFSRLEPEGSGSGDLDRDNEVLRGLP
GPPGPPGLPGAPGKPDSNAGSPGSPGKDGKDGPSGEPGPPGPQGHPGLDGMVGPPGKKGE
KGDQGLPGAVGPKGDAGDIGSPGPEGHTGADGQPGKPGPQGPPGPPGPPGPGYGFGFEDM
EGSGSISLLSGPRVPGSRGPNGEKGDTGPPGIAGLKGEQGADGKPGFPGVAGRPGDAGPK
GDKGDTGSKGEPGRDGASIVGPPGPPGSPGPIIAVPQLLLNDMDGISNFTGIKGLLGPPG
PDGRPGLPGFPGPRGPKGNIGLPGLQGPKGQQGEKGEPGVIISADGSLRELTERQGQKGE
HGVMGPPGPMGPVGPSGPQGELGIPGRPGRPGLNGLKGVKGERGVTLYGPPGLPGPPGPP
GPPGAVIHIKGTVFPISPRPHCKMPVGIAHPGNQDANIHGIKGEPGSWGLHGPPGLKGEK
GERGSPGLPGPPLPSPYFNHFVNSMKGEKGDNGETGFKGEKGEPSGGFFMSGPPGPPGPP
GRPGLVGPKGDSIVGPRGPPGLPGLPGSPGYGIVGPPGPPGPPGPPGPPAIYGSAAAVPG
PPGPPGEPGLPGTRNLVTTFRNIDSMLQKVHLVAEGTLIYLSESSEVFIRVRGGWRRLQL
GELIPIPADSPPPPAISGYGFQSLPALRPVSTINHGKPTLHLVALNLPFSGAMRADYQCF
QQARAAGLMSTYRAFLSSHLQDLSTVVRKSDRYNLPIVNLKGEILFNNWESVFTGSRGQF
NIQIPIYSFDGRNVMTDPSWPQKIIWHGSTANGIRLVSNYCEAWRTADMAVMGQASPLTS
GQLLDQKPYSCSNKFIVLCIENSFISDIRRK
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atgctctcaaggcattgctggtggccctggaatttgctactactgcactggggttcattt
ctccctgttgttttagcggctcaggtcatagaagaacgaggatcaaagggtcatcttgat
ctgacagagctgataggagttccactccctttttctgtctcctttatcactggctatgga
gggtttccagcttacagttttggaccagatgctaacatcggccgtttgacaagcacttta
ataccacagaccttctatagtgattttgctatcgtagttacagtaaaaccaaacagtgat
gatggaggtgtactatttgcaataacagatgcctttcagaaaactatatacttgggaatg
agactatcgccagttgatgatggaacccagagaataatcatgtactacacagagcctggt
tcctacatctcccgagaggccgcctcatttaaagttccagtgatgactaataaatggaat
cgatttacagtgactgttcagggaaatgacactgttctgttcatggactgtgaagaatat
aacagagttcagtttcagaggtcatctcaagcgttgcaatttgaatccaactctggtata
tttgttggaaatgcaggagcaacaggattggaaaaattcacagggtcgattcaacaacta
ttgatcaaacctgacccaagggctactgaagaccaatgtgaagatgatgacccatatgca
tcaggagattctagtggcactggtagcattcaagagcaggaaggagttcctgaggcacaa
gaagtcattgcatcttctcaaaccctacctgaagaaagaacagctgaacctgtaggagca
cctccaacggtatccgttcaatcagaagaaatggatttctcaggacatcatatattagat
gaaacacttgaaccacctacaatcaaagaacaaggttcaaccaatgcaggaaataatcaa
catgaaagtgagaccactacagtagcccaggaaatactaaaaccagaagctggttctggt
gctattgttttgcaaggagtgagcagagaaaagggccaaaaaggtgagagaggcgaaaaa
ggagagcaagggccacaagggccaccaggaccaccaggaaagtcagaactagaagaaatg
cagacagggattcaaggaccccctgggcccctaggaaaacctgggcgagacggtgaacct
ggcattcctggtaaagatggcttgccaggtgaaagaggacttcagggattgccagggttg
aagggagaggatggccttaaaggagaaaagggtgagcccggtgtgggactgccaggacca
ccaggacttccaggccttcccggcccatccgctccattcagaggatttagtagactggaa
cctgaaggatctgggtctggtgaccttgaccgagacaatgaggttttaagaggtctccct
gggccaccaggccctccaggattacccggagcaccaggaaaacctgattcaaatgcagga
tcccctggatcaccagggaaagatgggaaagatggaccttctggtgagccaggccctcca
ggaccccagggacatcctggacttgatggaatggttggccctcctggaaagaaaggagaa
aaaggtgatcaaggtcttcctggtgcagttggcccaaagggagatgctggagatattgga
tcaccaggcccagaaggccatacaggtgctgatgggcagcctggaaagcctgggcctcaa
ggaccaccaggaccaccggggccacctggcccaggctatgggtttggatttgaggacatg
gaagggtcagggagcatcagtttgttgagtggacccagagttccaggatcaagagggcca
aatggagaaaaaggggatactggtccaccaggtatagcaggtttaaagggtgagcaaggt
gcagatggaaaacctggatttcccggtgttgctggacgtcctggagatgcaggtccaaaa
ggggacaagggtgacacaggatccaagggtgaaccaggacgggatggtgccagtattgtt
ggaccaccagggccaccaggatcaccagggccaatcatagcagtaccacagctacttctc
aatgatatggatggaatttctaattttacgggaattaaaggactgcttgggcctccaggg
ccagacggcaggcccggtctaccaggatttcctggcccaaggggaccaaaaggtaacatt
ggactgcctggattacaaggaccaaaaggacaacagggtgaaaagggagaaccaggagtt
atcatatctgcagatggatctctaagagaacttacagaacgacaagggcagaagggtgag
catggggtaatgggaccaccagggcctatgggaccagtaggaccttctggacctcaggga
gaacttggtattcctggacgacctggccgcccaggattgaatggactgaaaggtgtaaaa
ggtgaacggggtgtaacattatatggtccccctggcttgcctgggcccccggggcctcct
ggacctccaggggctgtaattcacatcaaaggaacagttttcccaatttctcccagacct
cactgcaaaatgccagttggcattgctcatcctggaaaccaagatgctaacattcatggt
ataaaaggtgagccaggctcctggggactgcatggcccaccaggcttaaaaggtgaaaaa
ggagagagaggctcacctggactaccaggtcctcctctgccttcaccatatttcaaccac
tttgttaatagcatgaagggtgagaaaggagacaatggagaaactggcttcaaaggggaa
aaaggtgaaccaagtggaggattttttatgtcggggcctcctggaccccctggacctcct
ggaagaccaggactagttgggccaaagggggattcgatcgttgggccaagaggcccccct
gggttacctggcctacctggatctccagggtatggaatagttggacctcccggcccacca
ggccctcctggacccccaggacccccagcgatatatggctcagcagctgcagttccaggg
ccaccaggtcctcccggggagccagggctaccaggaaccaggaacctggttacaacattc
agaaatattgacagcatgttgcaaaaggttcatttagtagcagaaggtacattaatctac
ctgagtgaaagtagcgaggtgtttatccgtgttcgaggaggatggagaagattgcagctt
ggggaattaattcccatcccagctgacagccctccacctccggcaatttcaggctatgga
tttcagtctcttccagcactaagaccagtttcaactattaatcatggaaaaccaacactg
catttggtggctttgaacttgccattttctggtgccatgcgagctgattatcaatgcttt
caacaagcccgagcagctggtttaatgtcaacatacagagctttcctgtcatcccatttg
caagatctgtctacagttgtgagaaaatcagacagatacaatctaccaatagttaatctt
aagggagaaatactcttcaacaactgggagtctgtgtttactggcagcaggggacagttc
aacatccagattccaatatactcctttgatgggagaaatgtcatgacagatccatcttgg
ccacaaaaaatcatatggcatggttcaactgcaaacgggatccggctagttagcaactac
tgtgaagcttggcggacagctgacatggcagttatgggacaagcatcaccactgacctcc
gggcaacttctggatcaaaagccttacagctgcagcaataagtttattgttctgtgtatt
gaaaacagtttcatatctgatatccgaagaaaataa
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