KEGG   Dermochelys coriacea (leatherback sea turtle): 119851887
Entry
119851887         CDS       T09064                                 
Symbol
SEM1
Name
(RefSeq) 26S proteasome complex subunit SEM1 isoform X1
  KO
K10881  26 proteasome complex subunit DSS1
Organism
dcc  Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03050  Proteasome
dcc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dcc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    119851887 (SEM1)
  09124 Replication and repair
   03440 Homologous recombination
    119851887 (SEM1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dcc03019]
    119851887 (SEM1)
   04131 Membrane trafficking [BR:dcc04131]
    119851887 (SEM1)
   03051 Proteasome [BR:dcc03051]
    119851887 (SEM1)
   03400 DNA repair and recombination proteins [BR:dcc03400]
    119851887 (SEM1)
Messenger RNA biogenesis [BR:dcc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     119851887 (SEM1)
Membrane trafficking [BR:dcc04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    119851887 (SEM1)
Proteasome [BR:dcc03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     119851887 (SEM1)
DNA repair and recombination proteins [BR:dcc03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     119851887 (SEM1)
SSDB
Motif
Pfam: DSS1_SEM1
Other DBs
NCBI-GeneID: 119851887
NCBI-ProteinID: XP_038248396
LinkDB
Position
2:222154700..222162544
AA seq 87 aa
MSEKKQPVDLGLLEEDDEFEEFPAEEAKIGVIQQSSSSPHTENWAGLDEDEDAHVWEDNW
DDDNVEDDFSNQLRAELEKHGYKMETS
NT seq 264 nt   +upstreamnt  +downstreamnt
atgtccgagaagaagcagcccgtggatctggggctcctggaggaggatgacgagttcgag
gagttcccggcggaagaggcaaaaattggagtaattcagcagtcgtcgtcgtccccacac
acagagaactgggctggtttagatgaagatgaagatgcacatgtctgggaagacaattgg
gatgatgacaatgtagaagatgacttctccaatcagttaagagctgaactagaaaaacat
ggatacaagatggagacctcatag

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