Dermochelys coriacea (leatherback sea turtle): 119851992
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Entry
119851992 CDS
T09064
Symbol
NOD1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X2
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc04621
NOD-like receptor signaling pathway
dcc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
119851992 (NOD1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119851992 (NOD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
dcc04054
]
119851992 (NOD1)
Pattern recognition receptors [BR:
dcc04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
119851992 (NOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
CARD
NOD2_WH
LRR_4
FumaraseC_C
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
119851992
NCBI-ProteinID:
XP_038248632
LinkDB
All DBs
Position
2:complement(193447283..193496808)
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AA seq
951 aa
AA seq
DB search
MEGQSCANTKIIQQVPSGSSPPSFLNLLKIHRELLVSKIRNTQCLIDNLIKNEYFSTEDA
EIAAQFPIQADKVRKILDLVQSKGEEVSEYFIYILQEVSDAYYELQPWLDEIDFHPSQNI
QNKPVVNTDPVSRYRQKLKYELARDTKFVMSYAQKEEMLLEETYAASLIELVSYTNESLG
KVSRLEDLFDDRIGLINEDGETIYVFGDAGIGKSILLQKMQNLWARGELDVGAKFFFRFR
CRMFSCFKENEAICLKDLLFKYNCYPDQDPEEVFNHILHFPHTALFTFDGFDEIHSDFDL
SSIPEICSPNEPTHPLALLVNLLSGKVLKGSRKVLTARTGTEIHQNIIRKKVLLRGFSSS
NLKEYTKNFFRDEEYRVLMSNQLEANPSLCSLCSVPLFCWIIFKCFELLRSMFDSHELPN
YSVTLTDVFLLMTEVYLNRTLKTNLLKKNTRSQVETFRSKKETLFSLGTIAHMGMEKSHF
IFDQEEVTSLNMSEQDLHLGFLRTVHDCGGYGDQSSCEFLHLTLQSFFTALFLVTEEKLG
TKELLKFFAECSSTETAHSTCLPISWLRKCPIGEDPFQNKEHFHFTNLFLCGLLSKDKEK
LIRHLVSPAAIKRKRNALITYLLESMKFQVQSLMRARLKGYKQIQIMPNFVWMLRCIYET
QSEKLAKLTVRGTRANYLKLNYCNAYSADCSAISFVMQHFQKHLGLDLDNNNINDYGVKQ
LQPCFNKLAVIRLSVNQITDHGVRVLYDELSKYKIVTHLGLYNNQITDVGAKYVARLIEE
CSSLTYVKIGANKITTEGGKCLALAIQKSKTMFEIGMWGNQIGDEGAKAFAEALRNHPTL
TNVSLAFNGITTEGGKSIAEALQHNTTVKIFWLTKNAIDDEAAESFAEMLRVNKKLAHLW
LIQNQITAKGAKYLSEALQENTTMKEICLNGNLINQEESKAFANEERIICF
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtcagtcttgtgctaatacaaagattatccagcaagtaccctctggatcaagt
cctccatctttccttaacttgctgaaaatacatcgagaacttttagtcagcaaaatccga
aatacccagtgtttgattgacaacttgatcaagaatgaatacttctctactgaagatgca
gagattgccgcacagtttcctattcaagccgacaaggttcgtaaaattctggacctggtt
caaagcaaaggagaagaagtttcagaatatttcatctacatcctgcaagaggtctctgat
gcttattatgaactacaaccttggctggatgaaatagatttccacccttcacagaatatt
caaaataaacctgttgtaaatacagatccagtcagcaggtaccgtcagaaactcaaatat
gaattggcacgagacacaaagtttgttatgtcgtatgctcagaaggaggaaatgcttctg
gaggaaacctatgctgctagtcttatcgagctggtcagttataccaatgagagcctaggc
aaggtgagccgcttagaagatctgtttgatgatagaattgggttaattaacgaagatgga
gagacgatctacgtctttggtgatgcaggtattggaaaatccattttgctacaaaagatg
caaaatctttgggccagaggcgaattggatgtaggtgccaaatttttcttccggttcagg
tgcaggatgtttagctgttttaaggagaatgaagccatctgtttgaaggatctcctgttc
aaatacaactgttacccagatcaggaccccgaggaggtattcaaccacatcctgcacttc
cctcatacagccctcttcacgtttgatggttttgatgagatccattccgactttgacctg
agcagtatccccgagatctgctcacccaatgaacctacccaccctcttgccctgttggtg
aatcttctcagcggaaaggttcttaagggatccaggaaagtcctgacagcaaggacagga
actgagatccatcaaaacatcattaggaagaaagtactgctccgagggttttccagcagt
aacctgaaggagtacactaagaatttcttcagagatgaggagtatcgggtattgatgtct
aaccaactggaagcaaaccccagtctctgcagtttgtgttcggtgcctttgttttgttgg
attatctttaaatgctttgaactcctccgttccatgttcgacagtcatgagcttccaaac
tactcagttacactcacagatgtttttttgctcatgactgaagtttacttgaaccgaact
ctgaaaacaaatttgctgaagaagaacaccaggagccaagtggagacattcaggtcgaaa
aaggaaactctgttctctttgggtacaatagcacacatggggatggaaaagtctcacttt
atctttgaccaggaggaagtcacatccttgaacatgtcagagcaggatttacacctggga
ttcctcaggacggttcatgactgtggtggctatggagaccagtcctcctgtgagttcttg
cacttgaccctgcagtcttttttcacagctttgttcctagttactgaagagaaattgggt
acaaaggagttactgaagtttttcgcagagtgctcttccactgagactgctcactctact
tgtcttcctatttcctggttgcgcaaatgccctataggagaagatcctttccaaaataaa
gaacattttcacttcaccaatcttttcctctgtggtctgctttccaaagacaaggagaag
ctcatcagacatttagtttcacctgcagccattaagaggaaaagaaatgcgctcatcaca
tatctcttagaaagcatgaaatttcaagtgcagagcctgatgcgggcaagacttaagggt
tataaacagattcagatcatgcccaattttgtttggatgctgaggtgcatttatgagact
caaagtgaaaaattagccaagctgactgtcaggggcacgagggccaactacctcaaactc
aactattgcaatgcgtattcagcggactgcagcgccatttcctttgtgatgcagcacttt
cagaagcatctgggtctggatctagacaacaataatatcaatgactatggagtaaagcaa
cttcaaccttgttttaacaagcttgcagtgatcaggctgagtgttaatcaaatcacagat
catggagtaagagtactatatgatgagctctcgaagtacaaaattgtgactcacttgggc
ttgtacaacaaccaaattactgatgttggagccaaatatgttgcaagactcattgaagaa
tgttcaagcctcacatatgttaaaataggagcaaacaagataaccactgaaggagggaaa
tgtcttgcccttgctatccagaagagcaaaacaatgtttgaaattgggatgtggggtaac
cagattggagatgaaggagctaaggcgtttgcagaggcactgaggaatcaccccacctta
accaatgtgagtcttgcattcaatggcatcacgacagagggaggcaaaagcattgccgaa
gctttgcagcacaacaccaccgtgaaaatattttggttaactaaaaatgcaattgatgac
gaagccgcagagagttttgcagagatgctgagagtcaacaagaagctagcgcatttatgg
cttatccagaatcagattacagccaaaggggccaaatacctcagtgaagctctccaggag
aacacaaccatgaaagaaatctgcttaaatgggaacctgatcaaccaagaagagtccaaa
gcctttgcaaatgaagagcgcattatttgcttttga
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