Dermochelys coriacea (leatherback sea turtle): 119852489
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Entry
119852489 CDS
T09064
Symbol
EXOSC8
Name
(RefSeq) exosome complex component RRP43 isoform X1
KO
K12586
exosome complex component RRP43
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119852489 (EXOSC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcc03019
]
119852489 (EXOSC8)
Messenger RNA biogenesis [BR:
dcc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
119852489 (EXOSC8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Modigliani
Motif
Other DBs
NCBI-GeneID:
119852489
NCBI-ProteinID:
XP_038249613
LinkDB
All DBs
Position
1
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AA seq
348 aa
AA seq
DB search
MRKRLPAAALTTNRFGERSRASERPGSAAPPAGRSRLARQHNPARGVAPERLGERKFAPD
PGSRSRTGGSETMAAGFKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSITTADGS
ALVKLGNTTVICGIKAEFAEPPAESTNKGYIVPNVDLPPLCSSRFRPGPPGEEAQATSQF
IADVIENSEIIMKEDLCIANGKLAWVLYCDFICLDYDGNILDACTFALLAALKNVQLPTV
TINEETGLAEVDLKQTNPLNIRRHPVATSFAVFDDTILIVDPTAEEEDLATGTVTIVMDE
EGRLCSVHKPGGSGLTAAKLQNCITRAVTRHKEVKKLINKVIKSIKPK
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgcggaagcgtctcccggccgcggcgctgacaacaaaccgcttcggcgagaggagccgc
gcctcggagcgcccgggctccgccgcgccccctgccggccgctcccggctagccaggcag
cacaatcctgccaggggggtcgcgccggagaggctgggggagcggaagttcgctcccgac
cccggaagtagatcgcgcacgggcggaagtgagactatggcggccggattcaaaactgtg
gaacctttggaatattacaggcgatttttgaaagagaactgccgacctgatggaagggag
ctaggtgaattcagaacaaccactgtcaacataggttcaattactactgcagatggctct
gccctggtgaagttaggaaatactactgtaatttgtggcattaaagcggagtttgcagaa
cccccagcagagtccactaataagggatatattgttccgaatgtggatctaccacccctc
tgttcatcaagatttcgccccggacctcctggggaagaggctcaagcaactagccagttc
attgcagatgtgattgaaaattcagaaataataatgaaagaagatctgtgcattgcaaat
ggcaagcttgcttgggttctatactgcgatttcatatgcttggactatgatggaaacatt
ttggatgcctgcacatttgctttgttagcagctttaaaaaatgtacagttaccaacagtt
actataaatgaagaaactggtttggcagaagttgatttaaaacagacaaatcctttgaat
atcagaaggcatccagttgctacatcgtttgctgtatttgacgacacaatactcattgtt
gatccgacggcagaagaggaggacctggcaactggaactgtaaccattgtaatggatgaa
gaaggccgactatgttctgttcataagccaggtggaagtggcctaacagcagcaaaactt
caaaactgtatcacccgggcagttacaagacacaaagaagtgaagaagctgataaataaa
gtgataaaaagcataaaaccaaaataa
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