KEGG   Dermochelys coriacea (leatherback sea turtle): 119852762
Entry
119852762         CDS       T09064                                 
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
dcc  Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:dcc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    119852762 (TAF5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dcc03021]
    119852762 (TAF5L)
   03036 Chromosome and associated proteins [BR:dcc03036]
    119852762 (TAF5L)
Transcription machinery [BR:dcc03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     119852762 (TAF5L)
   Coactivators
    SAGA/TFTC/STAGA complex
     119852762 (TAF5L)
Chromosome and associated proteins [BR:dcc03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     119852762 (TAF5L)
    STAGA complex
     119852762 (TAF5L)
    TFTC complex
     119852762 (TAF5L)
    SAGA complex
     119852762 (TAF5L)
    SLIK complex
     119852762 (TAF5L)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_Gbeta WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd TFIID_NTD2 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_SCAP ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_IFT122_1st Beta-prop_WDR41 Beta-prop_RIG_2nd Beta-prop_IFT140_1st NBCH_WD40 Tricorn_2nd Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_VPS8 WD40_RFWD3 Beta-prop_EIPR1 PEP5_VPS11_N PROPPIN WD_LRWD1 Ge1_WD40 Beta-prop_IP5PC_F eIF2A Nbas_N Mala_s_1-like
Other DBs
NCBI-GeneID: 119852762
NCBI-ProteinID: XP_038250383
LinkDB
Position
3:132329858..132355659
AA seq 589 aa
MKRVRTEQIQMAVSCYLKRRQYVDSEGPLKQGLRLCQTAEEMAANLTVQSESGCANVVSA
APCMAEPQQYEVQFGRLRSFLTDSDSQHSHEVMPLLYPLFVYLHLNMVQNGLKSTVDSFY
SRFHGMFLQNASQKDIIEQLQTTLTIQDILSNFKLRAFLDNKYVIRLQEDSYNYLLRYLQ
SDNNNVLCKVLTLHIHLDVQPAKRTDYQLYASGSSSRNESNGLETTDMPASILQNEAALD
LLQDSIKRVKDGPPSLTTICFYAFYNTEQFLNTAEISPDSKLLAAGFDNSCVKLWSLRSR
KLKSEPHLVDVSRIRLACDIVDEEEEDDDNVGTEMKILRGHCGPVYSTRFLSDSSGLLSC
SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPWSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNG
KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSIRVWDIR
NTYCNAPADGSSSELVGVYTGQMNSVLSVQFMACNLLMVTGIAQENQEH
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgaaacgcgtacgcacagaacagattcagatggcagtgtcctgctacctcaagcgccgt
cagtatgtggactcggaaggtcccctaaaacaagggctgaggctgtgtcagactgctgaa
gagatggcagctaatctcacagtccaatctgaatctggttgtgccaacgtagtgtctgca
gctccctgcatggcagagccacagcaatatgaagtacagtttggacgattgcgcagtttt
ctcacagattcagattcccagcacagccatgaagtgatgcctcttctgtatccccttttc
gtctacctccatcttaacatggtccaaaatggcctaaagagcacagtggacagtttctac
agtcgcttccatgggatgttcttgcagaatgccagccagaaggatatcattgagcaattg
cagactaccctgacaattcaagacatcctgtccaacttcaagctccgggcatttctggac
aacaagtatgttatccgccttcaagaagacagctacaactaccttctccgctacctccaa
agtgacaacaacaatgttctttgcaaggttctcaccttgcacattcacctggatgtgcag
cctgccaagaggacggactaccagctatatgccagtggcagctcctcacgcaatgagagc
aatggcctggaaacgacagacatgcctgcttccatactgcagaatgaagcagcgctggat
ttactgcaggacagcattaaacgagtcaaggacgggcctccttcactaaccaccatatgt
ttctatgccttctataacacagagcagtttctgaacacagcagagatctcgccggatagc
aagttgcttgctgctgggtttgataattcttgtgtaaagctgtggagcttgcgatccagg
aagttaaaatctgagccccatcttgtagatgtgtccagaatccgcctggcttgtgacatc
gtggatgaggaggaggaagatgatgacaatgtaggcacagaaatgaagatactgagagga
cattgtggaccagtgtatagcacgaggttcctatcagacagttcgggactcttatcttgt
tctgaggacatgtccatcagatattgggaccttggaagttttacaaacactgtgttgtac
caagggcatgcctaccctgtctgggatttggacataagtccttggagcctgtactttgcc
agtggttcccacgaccgcacagcaagactctggtcattcgatcggacatacccactgcga
atatatgcgggccacttagcagatgtggactgtgtcaagtttcaccccaattccaactac
ttggctacaggatccacagacaaaactgtgcgcttatggagtactcaacaggggaactct
gtgcgcctcttcacaggtcaccgtggccctgtgctagcacttgcattttctcccaatggt
aagtatctggcttcagcaggagaagaccagcggttaaagctgtgggacttggcatctggc
actctttacaaagaactgagggggcacacggacaatataaccagccttacttttagtccc
gacagtagtttgattgcttctgcatcaatggacaattctattcgggtttgggacattcgg
aacacatactgcaatgcccctgcagatggttcttccagtgaactggttggtgtatatact
ggacaaatgaatagtgtactgagtgtacagtttatggcctgtaaccttcttatggtgact
ggaattgcacaagaaaatcaggaacattaa

DBGET integrated database retrieval system