Dermochelys coriacea (leatherback sea turtle): 119852836
Help
Entry
119852836 CDS
T09064
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2 isoform X1
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03008
Ribosome biogenesis in eukaryotes
dcc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119852836 (XRN2)
09123 Folding, sorting and degradation
03018 RNA degradation
119852836 (XRN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcc03021
]
119852836 (XRN2)
03019 Messenger RNA biogenesis [BR:
dcc03019
]
119852836 (XRN2)
03009 Ribosome biogenesis [BR:
dcc03009
]
119852836 (XRN2)
03016 Transfer RNA biogenesis [BR:
dcc03016
]
119852836 (XRN2)
Transcription machinery [BR:
dcc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119852836 (XRN2)
Messenger RNA biogenesis [BR:
dcc03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
119852836 (XRN2)
Ribosome biogenesis [BR:
dcc03009
]
Eukaryotic type
Pre-60S particles
RNases
119852836 (XRN2)
Transfer RNA biogenesis [BR:
dcc03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
119852836 (XRN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
119852836
NCBI-ProteinID:
XP_038250622
LinkDB
All DBs
Position
3:206856465..206947096
Genome browser
AA seq
958 aa
AA seq
DB search
MGVPAFFRWLSRKYPSIIVNSVEEKPKECNGIKIPVDTSKPNPNEVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGVEGAEEKQRIRQEILAKGGFLPPEEVKERFDSNCITPGTEFMDNLAKCLRYYIAD
RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG
LATHEPNFTIIREEFKPNKPKPCGLCSQFGHEVKDCQGLPREKQGEHDQFADCPPGSEQE
FIFIRLSVLREYLEKELTMASLPFTFDIERSIDDWVFMCFFVGNDFLPHLPSLEIREGAI
DRLVGIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDNIFKKRKDDEENFRRRQKE
KRKRMKRDQPSFIPGGQFSPQALGRGNRSSPQAISNPRQTAYEMRMQDKQNSTPSTSPNT
SFTSDGTPSPAGGIKRKAEDSDSEPEPEDNIRLWESGWKQRYYKNKFDVDVSDEKFRRKV
VQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADLPSDFEKGTKPFRPLEQL
MGVFPAASGNFLPPTWRKLMTDPESSIIDFYPEDFAIDLNGKKFAWQGVALLPFVDERRL
RAALEEVYPDLTPNENRRNSLGGDVMFVGKHHLLCDFVLELYKSSSTEPVDIPPELCHGI
QGKLTLNENAVLPDQTVESPVPLLRDLTPNSSISINFKDPQFQEDFVFKAVVLPGAKKPA
PVLKPGDWEKTNNNGRPWRPQLGFNRDRRPVHLDQSAFRTLGHAMSRERGQSGSGVYSNA
APLGAYQGNPYRPLLGGQPQIPKLLSNLRPQESWRGPTPLFQQPPQRYERNSGAAPLLSW
NRMLQSQGAAFQQNHYQGLGGPMNYPHRPDDRMDRGRQGYGPGRPYPLPPPSGRYNWN
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcccggccttcttccgctggctcagccgcaagtacccctccatcatcgtcaac
agcgtggaggagaagcctaaagaatgcaatggcatcaaaattccagttgataccagcaag
cctaatcccaatgaggtggagtttgataacctgtatttggatatgaatggtattatccat
ccatgtacacatcctgaggacaaaccagctcccaaaaacgaagatgaaatgatggttgcc
atttttgagtacattgacagacttttcaacattgtcaggccaagacgacttctctacatg
gcaatagatggagtagctccccgtgcaaaaatgaatcagcagagatccaggcgattcaga
gcatcaaaggaaggagtagaaggtgcagaagagaagcaaagaataagacaagaaattttg
gcaaaaggtggctttcttcctccagaagaagtgaaagagagatttgacagcaattgtatt
acaccaggaaccgagtttatggacaatcttgctaaatgccttcgctattacattgctgat
cgtttaaacaatgacccagggtggaaaaatttgacagttattttatctgatgcaagtgct
cctggtgaaggggaacacaaaatcatggattacattagaagacagagagctcaaccaaac
catgacccaaacactcatcattgtttgtgtggggctgatgctgatctgatcatgcttgga
ctagctacacatgaaccaaacttcactataatcagagaagagtttaaaccaaataaaccc
aaaccttgtggtctttgtagtcagtttggccatgaggttaaggattgtcaaggcttgcca
agagagaaacaaggagagcatgatcagtttgcagattgtcctcctggttctgaacaagag
tttatctttatccgattaagtgtgctgcgagagtatttggaaaaagaactaactatggcc
agtttgccttttacttttgatattgagagaagtatagatgactgggtcttcatgtgtttc
tttgtgggaaatgactttcttcctcatttgccatctttggagatcagggagggagcaatt
gatcgtctggttggcatatataaaaatgtggtgcacaaaactggggggtacctcacagag
agtggttacgtcaacctacaaagagtacagatgatcatgttggctgttggagaagttgaa
gataacatttttaaaaagaggaaagatgatgaggagaacttcagaagacgacaaaaagaa
aaaagaaaaagaatgaagagggatcagccttcttttattcctggtggccagttttcccct
caagctttggggagaggaaatagatctagtcctcaggcaatcagtaaccccaggcagaca
gcctatgaaatgagaatgcaagacaaacagaactcgactccttcaacatctcctaatact
agtttcacttctgatggcaccccttccccagcaggaggaattaagcgaaaagcagaagac
agtgacagtgaacctgagccagaggataatatcaggttatgggaatctggttggaaacag
cgctactataagaacaaatttgatgttgatgtgtctgatgagaaattccgtcgtaaagtt
gtacagtcttatgttgaagggctttgctgggttctcagatactattatcagggttgtgct
tcctggaagtggtactatcctttccattatgcgccatttgcctctgactttgaaggtatt
gcagacctaccctcagactttgagaagggtacaaaaccgttcagaccacttgaacaactc
atgggagtatttcctgctgctagtggtaactttctaccaccaacatggcggaagctcatg
actgatccagaatcaagtataattgacttctaccctgaagattttgctattgatttgaat
gggaagaaatttgcttggcaaggtgttgctctgctgccattcgttgatgagcgccgtctg
agagctgctctggaagaggtttaccctgacctcactcccaatgaaaaccgaagaaatagt
cttggtggtgatgttatgtttgttgggaaacatcacttgctttgtgactttgtattagaa
ctgtacaaatccagtagcacggagccagtggatataccccctgaactgtgccatggaatc
cagggaaaacttactctgaatgaaaatgcagttcttccagatcagacagtagagtctcct
gttccattgttgcgtgatctgacaccgaattcttccatcagtatcaatttcaaagatcca
caatttcaagaagactttgtattcaaagctgtagtgttacctggagcaaaaaaacctgca
ccagttctgaagccgggtgactgggaaaaaaccaacaataatggcaggccttggaggccc
caacttggttttaatcgagacagaaggccagttcatttggaccagtcggcattcagaacg
ttaggccatgcaatgtcacgggaaagaggacagtcaggaagtggagtctacagtaatgca
gcaccacttggggcttatcaggggaacccctacagaccacttctaggtggccaaccacag
attcctaaattgttgtcaaatctacggccccaagaatcatggcgtggtcccacacctctg
tttcaacagccaccacagagatatgaaagaaattctggagctgcccctcttctatcttgg
aaccgcatgctgcaatcccagggtgcagcattccagcaaaatcactaccaaggactaggt
ggaccaatgaattacccccacagacctgatgatcgaatggatagaggaagacagggatat
ggccccgggaggccctaccctttgccacctccgtctggaagatacaactggaattag
DBGET
integrated database retrieval system
