Dermochelys coriacea (leatherback sea turtle): 119852854
Help
Entry
119852854 CDS
T09064
Symbol
SHPRH
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH isoform X1
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcc04121
]
119852854 (SHPRH)
Enzymes [BR:
dcc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119852854 (SHPRH)
Ubiquitin system [BR:
dcc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119852854 (SHPRH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Linker_histone
Helicase_C
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
PHD
zf-RING_5
PEP-utilisers_N
Motif
Other DBs
NCBI-GeneID:
119852854
NCBI-ProteinID:
XP_038250673
LinkDB
All DBs
Position
3:complement(111854034..111994444)
Genome browser
AA seq
1690 aa
AA seq
DB search
MSSRRKRAPPLRMDEEKKKQLCWNMHEDRRNEVIILDDNIDEDHPVPGPSTSSVSFVIDD
DSIDEGLSYKENGGSKSVGFSTDEGEDSCSILTSISVQLNIVVSPYHSDNSWKALLGEFV
LQLLIEKILIEKIHKRSFTLMRADSGDQLQICVHERSGQEGGDEEKESLGDYEEDILVES
SLSSETLEDLRWLQKKKVIGLYQRPREDQALKVGIYLLEGGLSKSEFLSDGGGRIKKANQ
LIQKLMEKYYNFIIPDVLEEDEEESDRELERQNIEELYDFVRRTHQQEIQFLREDVQHSA
LIPVLRPYQSEAVNWMLQRENFRNNPTNENTLHFLWREIITPDGVKLYYNPFTGCIIHEH
PVAGPPWPGGILADEMGLGKTVEVLALILTHTRRDVKQDVLTLPEGKLVNFFVPPQPTEG
NKKKKTNKVELKSKEKVQYPSLRVMILAAVKEMNVKKGASIIAIFKYVSAIYRYDIQRNR
RLLKRTLEKLIAEQVVEQVKGHGLAGSFKLGKNYKEQKRHERTKKQTTRSSGRIQKTSLP
NAKTQTKESASRVTSSEKVKPPRLVDIPAEEHDYCTTSKNNKKSETGQRTCIKEENFQPR
VMDLESADLQGDLMSSDSTSPVLSTCKNTDDVEVLKDQSSDSQECAGSVMQHASSIFPFN
TSDYRFECICGELGLVDCKARVQCLKCHLWQHAECVNYKEENLKIKPFYCPHCLVAMKPV
STGATLIISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKHGFLQPHMLAEQEVVITTYD
VLRTELNYVDIPHSNSEDGRRFRNQKRYMAIPSPLVAVEWWRICLDEAQMVECTTAKAAE
MALRLSGINRWCVSGTPVQRGLEDLYGLVLFLGVDPYWVKHWWDQLLYRPYCRKNPQPLY
NLIANIMWRSAKKDVIDQIQIPPQTEDVHWLHFSPVERHFYHRQHEVCCQDALAKLRKIS
DWTLKLSSLDRRTVTSILYPLLRLRQACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCR
TECEEAHRQLVCALNGLAGIHIIKDEYALAADLYREVLRSSEEHKEKLKTDSLQRLHSTH
NLMELLTAKHPGIPPTLRDGRLEEEAEQLRQHYMSKSNAEVSEAHQALQPALQTIRELQR
KIHSGSLWWLDVIQTAIQYAIDEELVQRVQNEITSNYKQQTNKLSMSDKFRDCRGLQYLL
TTQMEEVKKFQKLVREAVKNLEGPPSKKVIEAATICHLRPVRLPLNNCVFCKADELFTEY
ESKLFSHTVKGQMAIFEEMIEDEDGLVDDRLPTTSRGLWAASETERSLKAILSFAKAHRM
DVRLIEEGNIFLELFEAWKKEYKLLHEYWMVLRDHVSAIDELAMATERLRVRHPDEPKPS
PPVLHIIEPHEVEQNRVKLLNDKAVAKSQLQKKLGQLLYLTNLEKSQDKTTGGVNPEPCP
ICARQLGKQWAVLTCGHCFCNECIAIIIEQYSVGTRRSSIKCAICRQTTSHKEISYVFTA
ETANQEDDIPVKGSHSTKVEAVVRTLKKIQFKDPGAKSLVFSTWQDVLDIISKALYDNNM
VFAQINGISKFQENLSAFKYDPKINILLLPLHTGSNGLNIIEATHVLLVEPILNPAHELQ
AIGRVHRIGQTKPTIVHRFLIKATIEERMQMMLKTVERSHTSSSMKQSEASVLTVADLAD
LFTEETEELE
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtcgtcgaaagcgtgcacctccactgaggatggatgaggagaaaaagaagcaa
ctctgttggaatatgcatgaagacagaaggaatgaggtgataatattggatgataacatt
gatgaagaccaccctgttccaggtccaagcacctcttctgtatcctttgttatagatgat
gatagcattgatgaaggactgtcttacaaagaaaatggagggtcaaagtcagtgggtttc
tcaacagatgaaggagaagactcttgctccatcttgacctctatatctgtacagctaaat
attgtagtctcgccttaccattcagacaattcctggaaagctttacttggagaatttgtt
cttcagcttcttattgagaaaattcttattgagaagatccataaaaggagttttactttg
atgagagcagattctggtgatcagctgcaaatctgtgttcatgaaagaagtggacaagag
ggaggtgatgaggaaaaagaaagcctaggtgattatgaagaggacatattggtggaatca
tccctcagtagtgaaacgttagaagacttgaggtggttgcaaaagaagaaggtaattgga
ctttatcaaagacctagagaagatcaagctttaaaggttgggatttaccttctggaaggt
ggtttaagcaaatcagagtttctcagtgatggaggtgggagaataaaaaaggccaaccag
ctgattcagaaactaatggaaaagtactacaactttataattccagatgtgttggaggag
gatgaggaagaatctgacagagagctggaacgacagaatattgaagagctgtatgacttt
gtgaggcgcacacatcagcaggaaatccagtttttgagggaggacgtacagcactctgct
ttgattcctgtactgaggccatatcaaagtgaggctgtgaactggatgttgcaacgggag
aatttcagaaacaaccctaccaatgaaaacacactacactttctatggcgagagatcatc
actccagatggagtaaaactctactataatccatttactggttgcattatccatgaacac
ccagttgcagggcccccgtggcctggaggaatcctggcagatgagatgggtcttggaaag
acagtagaggtgctggctcttattctgacacacacccgacgagatgttaaacaagatgtg
ctgacactacccgagggtaaattggtgaacttcttcgttccaccccagcctactgaagga
aacaaaaagaaaaaaacaaacaaagtggaacttaagtcaaaggagaaagtacagtatccc
agcttacgggtgatgatattagcagctgtcaaggaaatgaatgtgaagaagggagcttct
atcattgcaatatttaagtacgttagtgccatatatagatatgacatacagagaaaccga
cgtcttctcaaaagaactttggaaaaactaattgcagaacaagtagtggaacaggttaaa
ggtcatggtctggctggatcgttcaagttggggaagaattacaaagaacagaagaggcat
gagagaaccaaaaaacagacaacaaggagttctggaaggattcagaagacatctttgcct
aatgctaaaactcaaaccaaagaatcagcaagtagggtcacgtcttcagaaaaagtcaaa
cccccccggctggtggacattcccgcagaagagcatgactactgtacaactagcaaaaat
aacaaaaagtctgagacaggccaaaggacctgcataaaagaagaaaattttcagccaaga
gttatggacttggagtctgctgatttgcaaggcgatctgatgtccagtgattccaccagt
cctgtcctcagtacgtgtaaaaatacagatgatgtagaagtcctaaaggaccagtcctca
gactcccaagaatgtgctggcagtgtcatgcagcatgccagttccatttttccattcaac
acctctgactatcgttttgaatgcatatgtggtgagcttggcttggttgactgcaaggcc
cgtgtgcagtgcctgaagtgccacctatggcagcatgctgaatgtgtaaactacaaagag
gaaaacttgaagattaagcccttttattgtccccattgcctagtagcaatgaaaccagtt
tctacaggcgccactctgataatctctccaagttccatctgccatcagtgggtggatgaa
atcaacaggcatgtgagatcatcttcccttcgagtcctggtgtatcaaggtgtgaagaaa
catggcttcttgcagcctcacatgttagcagagcaggaggtagtcatcaccacttatgat
gtccttcgcactgagctgaactacgtggacatcccacatagtaacagtgaagatgggcgc
cgtttcaggaaccagaagcggtatatggctatcccaagtcccttagtagcagtggagtgg
tggaggatctgcctagatgaagcacagatggttgaatgcaccactgcaaaggctgcagaa
atggcactccgtttgagtggaatcaatcgctggtgtgtcagtggcactcctgtgcagcga
ggattagaagatctatatggcctagtgctttttcttggagttgatccttactgggtcaaa
cattggtgggatcagcttctgtatcgaccttactgtaggaaaaatcctcagcctctctac
aacctaattgccaacataatgtggagatcagcaaagaaggacgtgattgatcaaattcag
attccccctcagacagaagatgtgcactggcttcacttttctcctgtggagagacacttt
tatcatcgtcagcatgaagtgtgctgccaagatgcactagcaaaactcaggaagatttct
gattggactcttaaacttagcagcttggacaggaggacggtcacttctattctgtaccct
ttgctgcggctgaggcaggcctgctgtcatccacaagctgttcgtggggaattcttgcca
ttgcagaaaagcaccatgaccatggaggagctactaacttcactgcagaagaaatgtcga
actgaatgtgaggaagcccatcgacaactggtgtgtgctctcaatggtttagctggtatc
catatcattaaagatgaatatgcattggcagcagacctgtacagagaggtgttgcgttcc
tctgaagagcacaaagaaaagctcaaaacagattcactgcaaagacttcattctacacac
aacctgatggaactactgacagcaaagcatccagggataccaccaaccttgcgtgatggc
agacttgaggaagaggctgaacaacttcgacaacattatatgagtaaatccaatgcagaa
gtttcagaagctcatcaggccttgcaaccagcgctacaaaccattcgtgagctccagaga
aagatacattctgggtcgctttggtggttggacgtgatccagacagcaatacaatatgcc
attgatgaggagcttgttcagcgtgtgcaaaatgagataaccagtaactacaaacagcaa
actaataaactctccatgtcagacaagttccgtgattgtagaggccttcagtacctgctc
acaactcaaatggaggaggtgaagaagttccagaagcttgtaagagaagctgtgaaaaat
ctagaaggtcctccctctaagaaggttattgaagcagccactatctgccatctgcggccc
gttagacttcctttgaacaattgtgtcttctgtaaggctgatgagctgttcacagaatat
gagtcaaagctgttctcccatactgtgaaaggccagatggctatcttcgaagagatgata
gaagatgaagacgggctggttgatgaccgtttgcccaccacaagtcgaggactgtgggcc
gcaagtgagacagagcgctccctaaaagccatactgtcttttgccaaagctcaccgaatg
gatgttagactaattgaagaggggaatatatttctggaactctttgaagcatggaagaag
gagtacaagttacttcatgaatattggatggtactgagggatcatgtatctgctatcgat
gaacttgctatggctacagaacggctccgagtgcgtcatcctgatgagccaaagcctagc
ccccctgttcttcacatcatagaaccacatgaggtagaacaaaatcgagtgaaacttctg
aatgacaaggcagttgccaaatcacagcttcagaagaaactaggccaactcctatatctt
actaatttggagaagtctcaggataaaaccactggaggagttaatccagaaccttgtcca
atttgtgcccgccaactgggaaaacagtgggcagtgctgacatgtggacattgcttctgc
aatgagtgcatagctattattatagagcagtacagtgttggcacccgcagaagttcgatt
aaatgtgccatctgcaggcagacaacttctcataaagaaatatcctacgtcttcactgca
gagactgcaaaccaggaggacgatattcctgtgaagggaagtcactccaccaaagtggaa
gctgtggttcggactctgaagaaaatccagtttaaagatccaggggctaaatctttagtt
ttctcaacgtggcaagatgttttggacataatttcaaaagctctatatgataacaacatg
gtgtttgctcagattaacggaattagtaaatttcaggagaacctctcggcatttaaatat
gatcccaagatcaatattttgttgctaccccttcatactggttccaatggattaaacata
attgaggcaactcatgttctgctagtggaacccattttgaatcctgcacatgaacttcag
gccattggcagagtgcatcgtattggacaaacaaagcccaccattgttcacaggttcctg
ataaaagcaacaatagaagagagaatgcagatgatgctgaaaactgtagagagaagccac
accagctcttccatgaaacagtcagaagcctcagtgttgacagtggctgatctggcagac
cttttcacagaagaaactgaagaacttgagtga
DBGET
integrated database retrieval system
