Dermochelys coriacea (leatherback sea turtle): 119853133
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Entry
119853133 CDS
T09064
Symbol
TARBP1
Name
(RefSeq) probable methyltransferase TARBP1 isoform X1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dcc03016
]
119853133 (TARBP1)
03036 Chromosome and associated proteins [BR:
dcc03036
]
119853133 (TARBP1)
Enzymes [BR:
dcc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
119853133 (TARBP1)
Transfer RNA biogenesis [BR:
dcc03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
119853133 (TARBP1)
Chromosome and associated proteins [BR:
dcc03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
119853133 (TARBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
Motif
Other DBs
NCBI-GeneID:
119853133
NCBI-ProteinID:
XP_038251654
LinkDB
All DBs
Position
3:complement(135232401..135333661)
Genome browser
AA seq
1607 aa
AA seq
DB search
MELVLAEALLGLAHSPEPCALLRAVCGGDGAAPLSVERVETLRFLLQWLEAGGAGGEALR
RAAGEVALGRCWPLLRGGGGGADEPGRRRLVRAACGALRFCARLCGAPLAARLAGEALAA
LRAEPPGAGLGAEAAVEALVAVAPELREPALLERAVDAALALVRAGGRDAGEEVAAALVA
GRLLPALSRNRTALGRVWEGLLLLPGRGAEGGAAAAAQRVSRTLLALTALADLLFPGLEG
DGGGEGPAVDARLCGGFWRVVQKGLTDGDGLCRKRARYLLKRAVEVSDQLRADCTCPPDS
GDEPSLFWWSVEKNDKLLQFWENYILIMETLEGNQIHVIKPVLPKLNSLYEYAVSEKGCW
LFHPSWHMCIYKRMFESENKTLTREGVAQFLELYETKRLPDSPGFSEFIIGPLMDALSES
SLYGRSPGQLIGACPPLGMKLQKFLSTYLTLLPEEEKSSFLLKFIQKMTSRHWCAVPILF
LSMALACIPSYKALGTEGLHALRDVLQCTMITHQILLRGAAQCFLLQTAMHLTDVEKVSL
PEISSFLMSLRQEESLSRGTVLWMELCYWLYTHDRCFRKSINCQVEHQERSSLSVYVCTL
VEDYLKAPASKRENCFMPDWFEAKLVATMILLAADVEEVKNKHSKKSNTERVELKSFLHP
LLDVLLKLGTNAYIPTLKTDKSLQLLLKLLQTCLLKQSSPQDDVVLSFLSNSVMTAAESI
LDFVLRRLTTSELNTISDLDRCNLYLTLLSDLVNLCSKAGWKKGPSIWNFISSLINASIQ
NLQETGNEQEPKLGEQIQKVVSMASLTVVCEIIDQKPELQLKSLRAVETLKGFISSVQLN
QVLKKPSYIEEKNSLFEESTSSQGWGKIVASYVHDQWVCLHFILNKYHKFIPLSNDETLE
LSLLAVQRPIRTLQSALEALTLLPSDQVLPVFQCMKVLVPKLLGSSESLCIDAFDMAWKV
MSSLSNTQLIFWSNLKAFVWFVFDTEVLAVAASSKGQAYSKIKEIILKLVEMSTARTGVF
NIVLSYCCQSWLFPTSDDTGALENPFSNAGNYSELITEACVFGTIFRRDQRLIQDVHAFV
ENLGDECAANVVTESTNRDDHYVRVCAVKFLCLLDGSNVLHKMFMEDLVIKLLDKDELVS
KSRTRYYVNSLQHRIKNRLWQTLLVIFPKLDQNFLTGTLDKIFQAGFGNNQASIKYLIEW
IIILILNRYPQFLEKFWNCFCYGEEKLKTSICTFLSVLSHFDIILENTSEKKPILKKALL
VVLQWCFNHNFSVRLYALVALKKIWGMCKALCVEEFEALTPVIESSLHQVENMHGTGNAR
KNWQRIQDHFFFATFHPLKDYCLETIFYTLPRLSELVEDEWIPLCKFTRYTDISLPAAFH
WLHSRTELLNLKPSDWSQQDMGSDLVETDNQTEWTDVQKKIIPWKNSCPDLDLELIFQDR
AAKLGKSNSRLIVVASLIDKPTNLGGLCRTSEIFGASALVVGSLHYINDKQFQHLSVSAE
QWLPLVEVKPSQLVNYLQQKKTEGYTIIGVEQTAKSFDLTEYCFPEKSLLLLGNEHEGIP
ANLIQHLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQLIKQKQLK
NT seq
4824 nt
NT seq
+upstream
nt +downstream
nt
atggagctggtgctggcggaggcgctgctgggcctcgcgcacagcccggagccctgcgcg
ctgctgcgggcggtgtgcggcggcgatggggccgccccgctctccgtggagcgcgtggag
accctccgcttcctgctgcagtggctggaggccggcggggccgggggggaggcgctgcgg
cgggcggccggggaggtggcgctggggcgctgctggcccctgctgcgcggcggcggcggg
ggagcggacgagccggggcggcgccgcctggtgagagccgcctgcggggcgctgcggttc
tgcgcccggctctgcggggccccgctggcggcgcggctggccggggaggcgctggcggcg
ctgcgggccgagccgccgggggccgggctgggcgccgaggcggcggtggaggcgctggtg
gccgtggcccccgagctgcgggagccggccttgctggagcgggcggtggacgcggcgctg
gcgctggtgcgggcgggcgggcgcgacgccggggaggaggtggcggcggcgctggtggcc
gggcggctgctgccggcgctgagccggaaccgcaccgccctggggcgggtctgggagggg
ctgctgctgctgccggggcgcggggcggaggggggcgccgccgccgccgcccagcgggtg
agccggaccctgctggccctgaccgccctggcggacctgctgttccccggcctggagggg
gatggtggcggggagggcccggctgtggacgcccggctctgcgggggcttctggcgagtg
gtgcagaagggactcaccgacggggacgggctgtgccggaaacgagcccgctacctgctg
aagcgagcggtggaggtgtccgatcagctgcgcgcggactgcacctgccccccggacagt
ggagacgaaccaagtcttttctggtggtctgtggagaagaatgacaaacttttgcaattt
tgggaaaattacattttaataatggagactctggaaggaaatcagatacatgttataaag
ccagtcttaccaaagttaaacagtttgtatgaatatgcagtatcagaaaaaggttgttgg
ttgtttcatccatcatggcatatgtgcatttacaaaaggatgtttgaaagtgaaaacaaa
actttgacgagggaaggtgttgctcaatttctggaactgtatgaaacaaaacgccttcca
gattcaccaggattttcagagtttattattggaccattaatggatgcactttcagaaagt
tctctctatggcaggtcaccaggccagttgataggagcttgtcctcctttagggatgaag
ttacagaagtttttgtctacttacctcacactccttccagaagaagaaaaaagtagtttc
ctgttaaagtttattcagaagatgacaagtaggcactggtgtgctgttcccattttgttt
ctgtctatggcactggcatgtatcccatcatataaagcattgggtacagaaggacttcat
gctctaagagatgtcctgcaatgcactatgatcacacatcaaattttgttgcggggagct
gctcagtgttttcttcttcaaacggctatgcatttgacagatgtggagaaagtgtcactt
ccagagatttcaagttttctcatgtctcttagacaagaggagtccttaagcagagggacg
gtactgtggatggagctttgctattggctgtatactcatgacagatgcttcagaaagtcc
ataaactgccaggttgagcatcaagaaagatcttcattaagtgtatatgtatgtactctt
gtggaagattaccttaaggcacctgcatccaaaagagaaaactgctttatgcctgactgg
tttgaagctaagcttgttgctacaatgattctgctggctgcagatgtggaggaggtgaag
aataaacacagcaaaaaaagcaacactgaacgggttgaactaaagtctttcttgcacccc
cttctggatgtcttgttgaaacttggcactaatgcttacataccaacactgaaaactgat
aaaagtctacagctactgttgaagctattacagacctgtttgttaaaacaatccagtcca
caagatgatgtggtgttaagttttctctctaattctgttatgactgctgcagaaagtatt
ctggactttgtcctcagaagactcactacaagtgagttgaatactatttcagatctggat
cgttgtaatttatacttaacattattgtcagacctggtgaatttgtgctcaaaagctggc
tggaaaaaggggccctccatttggaatttcatctcttctctgataaatgcttctattcaa
aatctgcaggagacgggcaatgaacaggaacctaagcttggagaacagattcaaaaagta
gttagtatggcctcactaactgtggtttgtgagattattgatcagaaacctgaactgcaa
cttaagtctctacgcgctgttgaaaccctaaaaggttttatttcctctgttcaacttaat
caagtattaaagaagccttcttatattgaggaaaaaaatagtttatttgaagaatcaaca
tcttctcaaggatgggggaaaatcgttgcaagctatgtacatgaccagtgggtttgcctt
cattttattttaaataagtatcataaatttataccattgtcaaatgatgagactctggaa
ctatctttgcttgcagtccaaaggccaataagaactctacagtctgcactggaagctcta
actcttttgccttctgaccaggttttacctgtgtttcagtgcatgaaagtgcttgttccc
aagcttctgggctcatccgaatctctctgcatagatgcatttgatatggcttggaaagtt
atgtcctctttgagcaacactcagctaatattttggtctaatttaaaagcctttgtttgg
tttgtctttgacactgaagttcttgctgttgctgcaagtagcaagggtcaagcatattca
aaaataaaggagatcatactcaagctagttgaaatgtccactgcaagaactggagtcttt
aatatagtgcttagttattgctgtcagtcgtggttatttcctacatctgatgacacaggt
gctttagagaatcccttctcaaatgctggaaattacagtgaacttatcacggaggcctgt
gtctttggaactatatttaggcgagatcaaagactcattcaggatgtccatgcctttgta
gaaaatcttggagatgaatgtgcagccaatgttgtcacagaaagtacaaacagagatgac
cattatgtgcgagtttgtgctgtcaaattcctatgcttgttggatggatcaaatgtattg
cacaagatgtttatggaagaccttgtcatcaaactacttgataaagatgaattggtgtcc
aaatctagaacacgctactatgtgaactctttacaacacagaattaaaaatcggttgtgg
caaacactgctagttatttttccaaaacttgatcagaattttttgactgggactcttgac
aagatttttcaggctggatttggtaacaatcaagcatccataaaatacttaatagaatgg
attatcatcttgattctaaacagatacccccagtttcttgaaaaattctggaattgtttc
tgctatggtgaagaaaagcttaaaactagcatctgtacatttttatctgtgttgtctcac
tttgacattattcttgaaaatacctctgagaagaaaccaattttgaagaaagcccttctt
gttgttctacagtggtgtttcaaccacaatttcagtgttcgactttatgcattagtagct
ctcaagaaaatctggggtatgtgcaaagcattgtgtgtggaagaatttgaagctttgaca
ccagttattgaatcgagtcttcatcaagtggaaaacatgcatggtacagggaatgctaga
aagaattggcaacgaatccaagatcatttcttttttgcaacatttcatcccctgaaggat
tactgtctagagacaatattttacacacttccacgcctttcagaacttgttgaagatgaa
tggatcccactctgtaaatttaccagatatactgacatttctttgcctgcagcatttcat
tggctgcattctcgaactgaacttcttaatctaaaaccaagtgactggtctcagcaagat
atgggttcagatttagttgaaacggataaccaaacagaatggacagatgttcagaaaaag
atcatcccttggaaaaacagttgtcctgatttagacctggaattgatatttcaggaccgt
gcagctaaacttggtaaatccaacagtagattgattgtagtggcctcacttattgataaa
cccaccaatttaggaggtttgtgtcgtacaagtgaaatatttggggcatctgctttagtt
gttggcagtcttcattatataaacgataagcaatttcaacatctcagtgtttctgcagaa
cagtggcttcctcttgtcgaggtgaaaccatctcagcttgttaattatttacagcagaag
aaaactgaaggctacactatcataggtgtggagcaaactgctaaaagttttgacttaact
gaatactgctttccagagaaatccttgttattgctgggaaatgaacatgagggaatccca
gcaaacctgattcagcatctggatgtttgtgtggaaattcctcagcagggtatcattcga
tcactaaatgttcatgtaagtggagctctgctgatttgggagtatacgaggcaacaactg
atcaagcaaaaacaactgaaataa
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