Dermochelys coriacea (leatherback sea turtle): 119853624
Help
Entry
119853624 CDS
T09064
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
119853624 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dcc03400
]
119853624 (MSH2)
DNA repair and recombination proteins [BR:
dcc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
119853624 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
119853624
NCBI-ProteinID:
XP_038252834
LinkDB
All DBs
Position
3:178974534..179068970
Genome browser
AA seq
942 aa
AA seq
DB search
MAAAAAAAPVSAGESLWPEGSSAEGGFVRAVLALPAKPDTTVRFFERGEHYTVHGGDALL
AARELFRTRGVIRLLAGGPGNQKLESVVLSKMNFESFLRDLLLVRQYRVEIYKNKAGSKS
TKENDWYLAYKGSPGNLAQFEEILFGNNDMSTAIGVVGVKLYTADGQRIVGVGYVDTTLR
KLGVCEFPDNDQFSNLEALLVQIGPKECVLPGGETSGDMGKLRHIIQRGGIMITDRKKAE
FTTKDTVQDLNRLLKSKKEEQVTSATLPEIEKQVAISSLSAVIKYLELLLDESNFGQFEL
TSFDLSQYMILDNAAVRALNLFQSSVENVNSTQSLVGLLNKCKTPQGQRLVNQWIKQPLT
DKNRIEERLNLVEAFVIDTELRQCLQEELLRRFPDLNRLAKKFQRQVATLQDCYRMYQAI
NQLPNVVQALEKHEGAHQMLLLAVFVMPLNDLNSDFSKFQEMIETTLDMNKVENHEFLVK
ASFDPNLTELREKMNKLEESMQSLLKTAARELGLEAGKNIKLDSNSQLGHYFRITCREEK
VLRNNAKYKILDTQKNGVKFTNSKLSSFNEDYVRSREEYEEAQEAIVKEIINIASGYVEP
IQTMNDVIAQLDAVVSFAHVSNGAPVPYVRPVILEKGQGRIVLKGSRHPCIEVQDDIAFI
PNDVNFEKGKQMFHIITGPNMGGKSTYIRQAGVIVLMAQIGCFVPCDSAEVTIVDCILAR
VGAGDSQLKGVSTFMAEMLETASILRTASENSLIIIDELGRGTSTYDGFGLAWAISEYIA
SKICAFCMFATHFHELTALANQVPTVNNLHVTALTTDEMLTMLYRVKKGVCDQSFGIHVA
ELAAFPKHVIESAKEKALELEEFQTIGKPEESEGEPAAKRCYREKEEGEKIIQEFLCKVK
ALPLRDMSEEDIRTKLKQLKAEVLAKNNGFVNEIVSRTKVTP
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggcggcggcgcctgtgtccgcgggggagtcgctgtggccggagggc
tcgagcgccgagggcgggttcgtgcgcgcggtgctggcgctgcccgccaagcccgacacc
accgtgcgcttcttcgagcgcggcgagcattacacggtgcacggcggggacgcgctgctg
gccgcccgcgagctcttccgcacccgcggcgtcatccggctgctggcggggggcccagga
aatcagaaactcgagagtgttgtgcttagtaaaatgaactttgaatcttttctgagagac
ttacttctggttcgtcagtacagagttgaaatttacaagaacaaagcaggaagtaaatct
accaaagagaatgactggtatttggcatacaagggttctccaggtaaccttgcccagttt
gaggaaattctctttggcaataatgacatgtcgactgccattggtgttgtgggtgttaag
ctatatactgctgatggacaaagaatagttggagttgggtatgttgacactacgctcagg
aagctgggtgtctgtgagtttccagataatgatcagttctcaaaccttgaagctctgctg
gttcaaattggacctaaggaatgtgtgctaccaggaggagagacttctggagatatggga
aaactgcgacacatcattcaaagaggaggaatcatgattacagaccgaaaaaaggctgaa
ttcacaacaaaagatactgtgcaggatctcaaccgcttgctaaaatcaaaaaaggaagag
caagtgactagtgcaacattaccagagatagaaaaacaggttgcgatttcatccttgtct
gccgttatcaagtatttagagctcttattggatgaatctaactttggacaatttgaattg
actagctttgacctcagtcaatatatgatactggataatgcagctgttcgagctcttaac
cttttccagagttctgttgaaaatgtcaacagtacacaatcattggttgggttattaaat
aagtgcaaaactcctcaaggacaaagactggttaatcagtggatcaaacagccacttacg
gacaagaacagaatagaagaaaggttaaatttggttgaggcctttgtgatagacacagag
ctacggcagtgccttcaagaagagcttctacgtcgctttccagatctcaatcggctagcc
aagaaatttcaaagacaagtagcaaccctgcaggactgttatcgaatgtatcaagctatt
aaccaactgcctaatgttgtacaagcactggaaaaacatgaaggagcacaccagatgttg
ttgctggcagtatttgtaatgcctctcaacgatctcaactctgacttctccaagtttcag
gaaatgatagaaacaactttagacatgaacaaggtggaaaatcatgaattccttgtgaag
gcttcttttgatcctaacctgacagagttgagagagaagatgaacaaactagaggagagc
atgcagtctcttctaaagactgcagccagagaattaggcttggaagctggcaagaacatc
aaactggactccaattcacagttaggacattacttccgaattacctgccgggaagaaaaa
gtcctccggaacaacgcaaaatataaaatcttagatacccagaagaatggtgtgaaattc
acaaacagtaaattgagctccttcaatgaagactatgtaagaagcagagaagagtatgaa
gaggctcaggaagccattgttaaagaaatcattaacattgcttcaggatatgtagagcca
atacagacaatgaatgatgtgatagctcagttagatgctgtcgtcagttttgctcatgta
tcaaatggagcacctgtgccgtacgtacgtccagtcattctggaaaagggacaaggaagg
attgtgctgaaaggttctagacacccttgcattgaagttcaagatgacatagcatttatc
cccaatgatgttaactttgagaagggcaagcagatgttccatattattactggccctaac
atgggagggaaatcaacatacattcgccaggctggagtgatagttcttatggcccaaatt
gggtgctttgtaccatgtgactcagcggaagtgactattgtggattgtatcctggctcgg
gtaggagcaggagacagtcagttgaaaggtgtctcaactttcatggcggaaatgttagaa
actgcttcaattcttcggacagcatctgaaaactccttaataatcattgacgagttggga
agaggaacttcaacatatgatggatttgggttggcatgggctatttcagaatatatcgcc
agcaaaatttgtgccttctgtatgtttgccacgcattttcatgaactgacagcacttgct
aaccaagtgccaactgtgaataatttacatgttacagcacttaccactgatgagatgctg
actatgctttatcgtgtcaagaaaggtgtctgtgatcagagttttggaatacatgtagca
gagcttgctgcttttccaaagcatgtaatagagagtgcaaaagagaaggctctggagcta
gaggagttccaaactattggaaaacctgaggaatctgaaggagaaccagcagctaagaga
tgctacagagaaaaagaggaaggtgaaaaaataattcaggaattcctttgtaaagtgaaa
gcattgcccttgagagacatgtcagaggaagacatcagaaccaaactgaaacaattgaaa
gctgaagtgctggcaaagaacaacggttttgtgaatgaaattgtttcccgaacaaaagtt
actccatga
DBGET
integrated database retrieval system
