KEGG   Dermochelys coriacea (leatherback sea turtle): 119853683
Entry
119853683         CDS       T09064                                 
Symbol
HDAC2
Name
(RefSeq) histone deacetylase 2 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
dcc  Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03082  ATP-dependent chromatin remodeling
dcc03083  Polycomb repressive complex
dcc04110  Cell cycle
dcc04330  Notch signaling pathway
dcc04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:dcc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    119853683 (HDAC2)
   03083 Polycomb repressive complex
    119853683 (HDAC2)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    119853683 (HDAC2)
   04350 TGF-beta signaling pathway
    119853683 (HDAC2)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    119853683 (HDAC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dcc03036]
    119853683 (HDAC2)
Enzymes [BR:dcc01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     119853683 (HDAC2)
Chromosome and associated proteins [BR:dcc03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     119853683 (HDAC2)
   HDAC complexes
    Sin3A-HDAC complex
     119853683 (HDAC2)
    BRAF-HDAC complex
     119853683 (HDAC2)
    REST complex
     119853683 (HDAC2)
    SHIP complex
     119853683 (HDAC2)
    MiDAC complex
     119853683 (HDAC2)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     119853683 (HDAC2)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    119853683 (HDAC2)
  Chromatin remodeling factors
   NuRD complex
    119853683 (HDAC2)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 119853683
NCBI-ProteinID: XP_038252973
LinkDB
Position
3:complement(88596018..88658371)
AA seq 505 aa
MRRSRGCPHCGEGESAHRPLPRAGRRAVPLCNAEGDIGNYYYGQGHPMKPHRIRMTHNLL
LNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPV
FDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILE
LLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYY
AVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHA
KCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFK
LHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPD
KRISIRASDKRIACDEEFSDSEDEGEGGRRNIADHKKGAKKARIEEDKKETEDKKTDVKE
EDKSKDSSGEKTDTKGAKSELLSNP
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgcgccggagcagaggctgtcctcattgtggggagggggagagcgcgcaccgcccgcta
cctcgcgcaggcaggcgggcggtaccactctgtaacgctgagggtgatattggaaactat
tattatgggcagggccatcctatgaaaccccataggatccgtatgactcacaacttgttg
ctaaattatggcttgtacagaaaaatggaaatttatcgaccccataaagctacagctgaa
gaaatgaccaagtaccacagtgacgaatacatcaaatttcttcgatcaataaggccagac
aatatgtctgaatatagcaagcagatgcagagatttaatgttggagaagattgtcctgtg
tttgatggactgtttgagttctgccagctgtcaacaggaggctctgttgctggggcagta
aaattaaatagacaacagactgacatggctgttaattgggctggaggactccatcatgct
aagaagtcagaggcatctggtttctgttacgtcaatgatattgtacttgctatcctagag
ctgctgaaatatcaccaaagagtgttatacattgacattgatatccatcatggtgatggt
gttgaagaagcattttatacaacggaccgtgtcatgacagtatcattccataaatatggt
gaatattttcctggcacaggggacttaagggatattggagccgggaaaggcaaatactat
gcggttaattttccaatgagagatggtatagatgatgaatcatatggacagatattcaag
ccaatcatatccaaagtgatggagatgtaccagcctagtgccgtggtattgcagtgtgga
gcagattcattatctggtgacaggttggggtgttttaatcttactgtcaaaggtcatgct
aaatgtgtggaggttgtaaaaacttttaacttgccactgctgatgctaggaggaggagga
tatactattcgtaatgttgctcgatgttggacatatgagactgctgttgccttagattgt
gaaattcctaatgagttaccatacaatgactactttgagtatttcggaccagacttcaaa
ctgcatattagtccatcaaatatgacaaaccagaacacaccagagtatatggaaaagatc
aaacagcgcttatttgagaacttgcgtatgttgcctcatgcacctggagtacagatgcaa
gccattcctgaggatgctgttcatgaagacagtggagatgaggatggagaagatccagac
aaacgcatttcgattcgagcgtctgataagcggatagcctgtgatgaagaattctctgat
tcggaggatgaaggggagggtggacgacgaaacattgcagatcataagaaaggagcaaag
aaagccagaatagaagaagacaagaaagagacggaggacaaaaaaactgatgttaaggag
gaagataaatccaaggacagcagtggtgaaaagacagacaccaaaggagcgaaatcagaa
ctgctcagcaatccttga

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