Dermochelys coriacea (leatherback sea turtle): 119853816
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Entry
119853816 CDS
T09064
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119853816 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcc03019
]
119853816 (HBS1L)
Messenger RNA biogenesis [BR:
dcc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
119853816 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
GIP1_N
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
119853816
NCBI-ProteinID:
XP_038253239
LinkDB
All DBs
Position
3:complement(104169378..104292011)
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AA seq
688 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDLYGQSVEDDCCISPSTAAQFIYSRRDKPSAFAERLEEEYG
YEDVQEPAKNITSNHQLTGVDQARLYSCLDQMREVLGEAVPEQVMVEAVLNSKFDVQKAL
DLVLAQDSKQNVKTKNEEAVTTGKTTKGKPRDSQSTRIDSKIVPKVTKMTVSGKKQAMGF
EVPSVIAEENGHSANTPQKRPSSEDSIVTSGVVELVSKSALPSQTIQIPEEQSTVPTPVK
KSSKTRQQIDVKAELEKRQEGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYE
HESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMI
TGAAQADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVSWQQE
RFQEITSKLGQFLKQAGFKDSDVAYIPTSGLGGENLVTSCQSSELTEWYKGKCLLEQIDS
FKPPQRSVDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQLGDRLLAMPPNETCTAKGITL
HDEPVDWAAAGDHVGLTLTGMDIIKINVGCIFCGLKEPIKACTRFRARVLIFNIDVPITK
GFPVLLHYQTVSEPATIRRLLSILHKSTGEVTKKKPKVLTKGQNALIELQTQRPVALELY
KDFKELGRFMLRYSGSTIAAGVVTEIKE
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcacaggaacgtccgaggctataactacgacgaagattttgaagatgatgat
ctttatggccaatcagtagaggatgattgttgtatttccccttcaacagctgctcagttt
atttattcaagacgtgacaaaccctcagcatttgctgaacgattagaagaagagtatggc
tatgaagatgtgcaagaacctgccaagaatattacatccaatcatcagctaactggagtt
gatcaagctcgtctttattcgtgccttgaccagatgagagaagtgctgggggaagctgta
ccagagcaggtgatggtggaagcagttttgaatagtaaatttgatgtacaaaaggctttg
gatcttgtgcttgcacaagacagtaagcaaaatgtgaagaccaagaatgaagaagctgtg
actacaggaaagacaacaaaaggaaaaccaagagattcccagtcaaccagaatcgattct
aaaattgtgccgaaagttaccaaaatgactgtgtctggaaagaaacaagctatgggattt
gaagttccaagtgtgattgctgaagagaatggtcatagtgctaatacacctcaaaaaaga
ccatcatctgaagattccattgtcacttctggagtagttgagttggtctctaaatcagct
cttccatcccaaacaattcagattccagaagagcagagtacagtacctactccagtgaaa
aagtccagcaagacaagacaacaaatagatgtgaaagcagagctggagaagaggcaagaa
ggaaaacagctgctgaatttagtggtcataggacatgttgatgcaggtaaaagtactcta
atgggtcatttactttaccttctgggcaatgtcaacaaacgaactatgcacaaatacgag
catgaatccaaaaaggctggcaaagcttcatttgcttatgcatgggttttggatgaaact
ggggaagaaagagaaaggggagtaacaatggatgtgggtatgaccaaatttgagacaaag
actaaagttattacattgatggatgctccaggccataaagatttcatcccaaatatgatc
acaggagctgcacaggctgatgtggctatcttggttgtggacgctagcaggggagagttt
gaagcagggttcgagactggtggacagactcgagaacatgggttattggttcgttctctt
ggagtaacacaactggcagttgcagtcaataaaatggaccaggtcagttggcaacaggag
agatttcaggaaattaccagtaaacttggccagtttcttaaacaagctggctttaaggat
tccgatgtagcttatatccctacaagtggtcttggtggtgaaaatctagtcacaagctgt
caatcaagtgaactcactgaatggtataagggcaaatgtttgttagaacaaattgattct
ttcaagccaccacagagatcagtggataaaccatttagattatgcgtgtctgatgttttt
aaagaccaaggatcaggattttgtgtgactggtaaaatagaagcaggctatatacagctt
ggagaccgacttctggctatgcctcccaatgaaacttgcactgcaaaaggaatcacactg
catgatgaaccagttgattgggctgcagcaggagatcacgttggtctcactttgaccggc
atggatatcatcaaaatcaatgttggctgtatattttgtggtcttaaggaacccatcaaa
gcctgcactcgtttcagagctcgagttctcatttttaatattgatgtccccattactaaa
ggattcccagtgcttttacattatcaaactgtaagtgaacctgccactattagacgatta
ttgagtatccttcacaagagtactggcgaagtcacaaagaaaaaacctaaggtcctgact
aaaggacagaatgctttaatagaattacaaacacaaaggcctgttgccctggaattgtac
aaagattttaaagaacttggaaggtttatgttacgctacagcggatccactatagctgca
ggagttgtcacagagattaaagaatga
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