Dermochelys coriacea (leatherback sea turtle): 119853819
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Entry
119853819 CDS
T09064
Name
(RefSeq) PH-interacting protein isoform X1
KO
K11797
PH-interacting protein
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcc04121
]
119853819
Ubiquitin system [BR:
dcc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
119853819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Bromodomain
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_DCAF12
WbmS-like
Motif
Other DBs
NCBI-GeneID:
119853819
NCBI-ProteinID:
XP_038253246
LinkDB
All DBs
Position
3:complement(62097573..62409488)
Genome browser
AA seq
1819 aa
AA seq
DB search
MSGDGGGHSAELRAELYFLIARFLEDGPCQQAAQVLIREVAEKELLPKRTDWTGKEHPRS
YENLVKYYRHLAPDHLLQICHRLGPLLEQEIPQSVPGVQTLLGAGRQSLLRTNKSCKHVV
WKGSALAALHCGRPPESPINYGSPPSIVDTLFSRKLNGKYRLEQLVPTAVYQHMKMHKRI
LGHLSSVYCVTFDRTGRRIFTGSDDCLVKIWATDDGRLLATLRGHAAEISDMAVNYENTM
IAAGSCDKMIRVWCLRTCAPLAVLQGHSASITSLQFSPLCSGSKRYLSSTGADGTICFWL
WDAGTLKINQRPTKFMERPRPGVQMICSSFSAGGMFLATGSTDHIIRVYFFGSGQPEKIS
ELEFHTDKVDSIQFSNTSNRFVSGSRDGTARIWQFKRREWKSILLDMATRPTGQNVQGVE
DKITKLKVTMVAWDRHDNSVITAVNNMTLKVWNSFTGQLIHVLMGHEDEVFVLEPHPFDP
RVLFSAGHDGNVIVWDLARGVKIRSYFNMIEGQGHGAVFDCKCSPDGQHFACTDSHGHLL
IFGFGSSSKYDKIADQMFFHSDYRPLIRDANNFVLDEQTQQAPHLMPPPFLVDVDGNPHP
SRFQRLVPGRENCRDEQLIPQMGVTSSGLNQVLSQQANQEVSPLDSMIQRLQQEQDQRRS
GEAGTSNPSRIGRSSVSSTSEVHSPPNIGLRRSGQIEGVRQMHSNAPRSEIATERDLVAW
SRRVVVPELSLGVASRQEEWRTAKGEEEIKIYRSEEKRKHITSHVPRENKIPSFSKNHSH
DHILDTGDSRKQQINQHNYRTRYALEETARPAEELENGNSSSDEGEAVVASGGTSEDEEK
AWHSDGSSSEYSSDYSDWTADAGINLQPPKKIPKLKTKKAESSSEDEEGIEKQKQKQIKK
ERKKGNEDKDGPTTSPKKRKPKERKKKRLAVGVLAENGLTLEEWLPSAWITDTIPRRCPF
VPQMGDEVYYFRQGHEAYIVMAKKNKIYSINPKKQPWHKMELREQELMKIVGIKYEVGLP
TLCCLKLAFLDPDTGKLTGGSFTMKYHDMPDVIDFLVLRQQFDDAKHRRWNIGDRFRSVI
DDAWWFGTIESQEPLQPEYPDSLFQCYNVCWDNGDTEKMSPWDMELIPNNAVFPEELGTS
VPLTDVECRTLIYKPLDGEWGSRTRDEECDRIIAGINQLMTLDIASAFVAPVDLQAYPMY
CTVVAYPTDLSTIKQRLESRFYRRLSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFVTDLL
LHFIKDQACYDIIPLYNTMKKKVLSDSDEEEEKDTNVPGTSTRKRKDHQPKRRLRNRAQS
YDVQAWKRQCQELLNLIFQCEDSEPFRQPVDLLEYPDYRDIIDTPMDFATVRETLEAGNY
ESPMELCKDVRLIFSNSKAYTPSKRSRIYSMSLRLSAFFEEHISSVLSDYKSALRFHKRN
TIKKRRRKRRRSSSVSSSAASSPERKRRLIKPQLKAETPGASSSSVPVRSTTLRHIAAQM
NGKVAESSSLVRTRSNRGITDTAVTEQPSTSSGGKPSITKPNTTTVSGKTILENSTKHSK
NQNILSIPSQSSYSHNTRNNSSRENVEKDKQIKRKMKSSTINQQADCKNNALASGSIQIN
GHGGQPSKLPVKRGPVRKLKIEANSSTCEVVHKKRGRKPKKLQIAEQMNAEQNSVQTTRD
MVIEEPSVSSACNSLSENNVKETVLQKKGRGGRKPKRKTQTSQPDSDLLVPANVKMQTRS
RRKKMDEPVEEEGSEELKDSEPHMRTRNQGRRTAFYNEDDSEEEQRQLLFEDTSLTFGTS
SRGRVRKLTEKAKANLIGW
NT seq
5460 nt
NT seq
+upstream
nt +downstream
nt
atgtccggggacggcggcgggcacagcgcggagctgcgagcggagctctacttcctcatc
gcccgctttctggaggacggaccctgccagcaagcggctcaggtcctgatccgagaagtg
gcggagaaggagctgctgcccaagcgcacggactggacgggcaaggagcatccgcggagc
tacgagaacctggtgaaatattatagacacttggcacctgatcacttgctgcaaatatgc
catcgactaggaccacttctagagcaagaaattcctcagagtgtccctggagtgcaaacc
ttattaggagctggaagacagtctttgcttcgcacaaataaaagttgcaaacatgttgtg
tggaagggatctgctcttgctgcattacattgtggtaggcctccagagtcaccaataaac
tatggcagcccacctagtatagtggacacccttttttcaagaaaactaaatggaaaatac
agacttgaacaacttgttccaactgctgtgtatcaacatatgaaaatgcacaaacgaatc
ctaggacacttatcttcggtatactgtgtaacttttgatcggactggcagacggatattt
accggttctgatgattgccttgtaaaaatctgggcaacagatgatggaaggttgttggca
actttaagaggacatgcagctgaaatatctgacatggctgtgaactatgagaacaccatg
attgctgcagggagctgtgataaaatgatcagagtttggtgtcttcgaacatgtgcaccc
ttagcagttttgcagggtcacagtgcatccataacatcactacagttttctccattgtgc
agtggatcaaagagatatctgtcttcaaccggagcagatggaacaatatgtttttggctg
tgggatgctggcacccttaaaataaatcagaggccaacaaagtttatggaacgtcctcgc
cctggagttcaaatgatctgttcttcttttagtgctggtggaatgtttttggccactgga
agtacagatcacatcattagggtttatttctttggatcaggtcagccagagaagatatca
gagttggagtttcatactgacaaagttgacagcattcagttttctaacactagtaacaga
tttgtgagtggaagccgtgatgggacagcacgcatatggcaatttaagcgaagggagtgg
aagagtattttgttagatatggctactcgtccaacaggacaaaatgtacaaggagtagaa
gacaaaatcacaaaactgaaagtaactatggtggcatgggaccgccatgacaattctgtt
ataactgcagttaataacatgactctgaaggtttggaattctttcactggccagcttatt
catgtccttatgggacacgaggatgaagtatttgtacttgagcctcacccatttgatcct
agagttctcttctctgctggccatgatggaaatgtcatagtttgggatttggccagaggg
gtcaaaattcggtcttacttcaacatgattgaaggacaaggacatggggcagtttttgac
tgcaagtgctctcctgatggccagcattttgcatgtacagactctcacgggcaccttctc
atttttggctttggctccagtagcaaatatgataagatagcagatcagatgttctttcac
agtgattatcgacctcttatccgagatgccaacaactttgtcttagatgaacagacacag
caggctccacatctcatgcctcccccttttttggttgatgttgatggcaaccctcatcca
tcaagattccagagattagttccaggtcgtgagaactgcagggatgagcagcttattcca
cagatgggggtgacttcctcaggactgaaccaagtactgagtcaacaagcaaatcaggaa
gttagtccattggacagtatgatacaaagacttcagcaagaacaagatcagagacgttct
ggggaggcaggcaccagcaatcctagccggataggaagaagctctgtaagctctacctca
gaagtacattcaccaccaaatataggattaaggcgcagtggacaaattgagggtgtgcga
cagatgcatagcaacgcaccacgaagtgaaatagccactgagcgggacctcgtggcttgg
agtcgaagggttgtggtacctgagctgtcactgggggtagcaagtagacaggaggaatgg
agaacagcaaagggagaagaagaaataaagatttatagatcggaagagaaaaggaagcac
attacaagtcatgttccaagagagaacaaaataccttctttttctaagaaccattctcat
gatcatatattagatactggagactcaagaaagcaacagataaaccagcacaattaccgt
accagatatgcattggaagaaactgccaggcctgctgaagagttagaaaatggaaacagt
tcttcagatgaaggagaagccgttgttgccagtggtggaacatcagaagatgaagagaaa
gcatggcacagtgatggcagctctagtgaatactccagtgattactcggactggaccgca
gatgcaggaattaatctgcagccgccaaagaaaattcctaaacttaaaaccaagaaagca
gagagcagttcagaggatgaagaggggattgaaaaacagaaacagaagcaaattaaaaag
gaaaggaaaaaagggaatgaagataaagatggaccgacaacatcaccaaagaaaaggaaa
cccaaagagagaaaaaaaaagaggttggctgtaggagttttggcagaaaatggcttgacg
ttggaagaatggctgccttcagcatggattacagatactattcctcgtcggtgtccgttt
gtgccacaaatgggtgatgaggtttactatttccgacaaggtcatgaagcgtatattgta
atggctaaaaagaataaaatatatagcattaatccaaaaaaacagccgtggcataaaatg
gaactacgggaacaagagctgatgaaaatagttgggattaaatatgaagtgggattgcct
actctctgctgtcttaaacttgcttttcttgacccagatactggtaaattgactggagga
tcattcaccatgaagtaccatgatatgccagatgttatagatttcctagtcttgcggcag
cagtttgatgatgcaaaacatagacgatggaatataggtgatcgtttcaggtcagtaata
gatgatgcctggtggtttggaacaattgaaagccaggaacctctacagcctgaatatcct
gacagtttatttcagtgctacaatgtctgctgggataatggtgacactgagaagatgagt
ccttgggatatggagctcataccaaataatgctgtgtttcctgaagagctgggaactagt
gttcctttaactgatgttgaatgccgaacattgatctacaaacctctggatggagaatgg
ggttccagaacccgagatgaggaatgtgacagaattattgcagggataaaccagctcatg
actctagatattgcttctgcatttgtggcacctgtggatctccaagcttatccaatgtat
tgcactgttgtggcatatcccacagatctcagtaccattaaacaaagactggaaagcaga
ttttacaggcggctttcttcacttatgtgggaagttcggtacatagaacataatacacgc
acgttcaatgaaccaggaagccctattgttaaatctgccaaattcgttacagatcttctg
ctacacttcataaaagaccaggcttgctatgatataattccattatataatacaatgaag
aagaaagtcttgtctgactctgatgaggaagaagagaaagatacaaatgtgccagggacg
tccactagaaaaaggaaggatcatcaacccaagcggaggctgcgcaacagagcacagtca
tatgatgttcaggcatggaagagacaatgccaggagttgttaaatcttatttttcagtgt
gaggactctgaaccttttcgccaaccagtggatctccttgaatatccagattacagagat
attattgacacaccaatggattttgctacagttagagaaactctggaagccggcaattat
gagtctccaatggaattatgtaaagatgtcagacttattttcagcaactctaaagcttac
acaccaagcaaaagatcacggatttacagcatgagtttgcgcctttctgctttctttgag
gaacatataagttccgttctatcagattataaatctgctctgcgctttcataaaagaaac
acaataaagaaacgaaggaggaaaagaagaagaagcagttctgtttccagtagtgctgca
tcaagccctgaaaggaagagaaggttaataaaacctcagttgaaggcagaaacccctggt
gcctcctcatcttcagttcctgtacgttcaacaacactgagacacattgctgctcagatg
aatggaaaagtagctgaatcttcctctttggtgcggaccagaagtaatagggggataaca
gatacagctgttacagaacaaccatccacttcttcaggaggaaaaccttcaattacaaaa
cccaatactactacagtgtcagggaaaacaatactggagaattccaccaaacattccaag
aaccagaatattctatccattcctagccaatccagttacagccacaacactaggaataac
tcttcaagagaaaatgtggagaaagataaacaaattaaacgtaaaatgaaatcatccact
attaatcagcaagcagactgcaaaaataatgctttggcatcaggaagcattcagataaat
ggacatggagggcaaccttcaaaacttccagttaaaagagggcctgtgcggaaactgaag
atagaggctaatagcagtacatgtgaagtggtgcacaagaaaagaggtagaaaaccaaaa
aagttacaaattgctgaacagatgaatgcagagcagaattcagtccagaccaccagggac
atggtaatagaagaaccctcagtttctagtgcatgcaattctctttctgaaaataatgtg
aaggaaactgtattacaaaaaaaaggccgtggaggcagaaagccaaaaagaaagacacag
acaagtcaaccagactcagaccttctagtccctgcaaatgttaagatgcagacaagaagc
agaaggaaaaaaatggatgaacctgtagaagaagaaggatctgaggaactgaaagattct
gaacctcacatgagaactagaaaccagggtaggaggacagccttttacaatgaagatgac
tctgaagaagagcaaaggcagctattgtttgaagacacctctttaacttttggaacgtct
agcagaggcagagtccgaaagttgactgaaaaagcaaaggctaatttgattggttggtaa
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integrated database retrieval system
