Dermochelys coriacea (leatherback sea turtle): 119853856
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Entry
119853856 CDS
T09064
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
119853856 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dcc03400
]
119853856 (MSH6)
DNA repair and recombination proteins [BR:
dcc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
119853856 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
119853856
NCBI-ProteinID:
XP_038253312
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All DBs
Position
3:complement(185508358..185539729)
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AA seq
1342 aa
AA seq
DB search
MSRQSTLLRFFPKAQAPSPSAGDRRKGWASSEAVGDEAAGGGAAEMGQCGGVEAHGARKG
RTKAARAPSVSCDYSPGDLVWAKMEGYPWWPCLVYNHPTEETVVRAKGKSSRVHVQFFDD
SPTRGWVSIKYLKPYKGSAVRETQRGGMFYSSKPEIKRAMEMADEAMRIDKTKRLELAVC
NEPSDTEDEEEMEVSESASGNSEDYDSEEEEKKKKLLASRWRSGGKTKKRRVVDSDSNNE
GSDEEFKPDAKDEASSDEASSGMGEGESASSETDTKMDADSPVKVPSKRKRETDRKPAKR
NSLENDLPETPKRAITVSLETKSRLTSFAAPENFESQPNVSSSTIWEHDKLEWLQEGKKR
DGCRRRQSDPHYDPCTLHVPEDYLNKCTPGMRKWWQLKSQNFDAVIFYKVGKFYELYHMD
AVTGVNELGLIFMKGIWAHSGFPEIAFGRFSDVLVQKGYKVVRVEQTETPEMMEARCRSL
AHPTKFDRVVRREICRIITKGTQTYSVLDGDPSENLNKYLLSVKEKVEDTSGRHRAYGVC
FVDTSVGKFYVGQFPDDRHCSRFRTLVAHYTPVQILFEKGNLSADTHKILKGSLSSSMQE
GLISGSQFWNASKTLKTLIEEGYFEDKQNVDERFILPPVIKSMTSEIDSLGLTPGENCEL
ALSALGGCVFYLKKCLIDQELLSLANFEEYVPVDIDVVKAKGSSSFFAKTNQRMVLDGVT
LTNLEIMQNGTTGTTEGTLLERIDICCTPFGKRLLKQWICTPLCNPHSINDRLDAVEDLL
AVPDKMFEVSELLKKLPDLERLLSKIHSIGSPLKSETHPDNRAIFYEETRYSKKKITDFL
STLEGFKVMLQIIGIMEEIAADFKSKTLKQLVTLKSKNPEGCFPDLSTELKRWDTAFDHN
EARKTGVITPKAGFDPDYDKALKDITDIEENLREYLDKQRKRLGFKAMLYWGAGKNRYQM
EIPENAISHNLPEEYELKSTRKGYKRYWTKEIEKMLAEMVNAEERRDAALKDCMRRLFHN
FDKNSKDWQTAVECIAVLDVLMCLANYSQESDGPFCRPVILLPEQNTPPFLELKGSRHPC
ITKTFFGDDFIPNDIVIGSKNEDEDSNSEAYCVLVTGPNMGGKSTLMRQAGLLAIMAQLG
CYVPAEACRLTPIDRVFTRLGASDRIMSGESTFFVELSETSSILRHATEHSLVLVDELGR
GTATFDGTAIASAVVKELAENIKCRTLFSTHYYSLVEDYSHSAAVRLGHMACMVENETED
PSQETITFLYKFIKGACPKSYGFNAARLANIPEEVIQKGHRKARDFEKVTLSLRLFRHLC
LVAENAAGDKAVPKLMTVINNL
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcaaagcaccctgctccggttcttccccaaggcccaggccccttctccttcg
gccggagacaggcgcaagggctgggcctccagcgaggcagtcggggatgaggctgccggc
ggcggcgcggcggagatgggacaatgcggcggagtcgaggcccatggggcgaggaagggg
agaaccaaggccgcccgggcccccagcgtctcctgtgattattcacctggtgatttggtt
tgggccaagatggaaggatacccttggtggccgtgtcttgtatacaaccacccaactgaa
gaaacagtagtcagagcgaaaggaaaatcctctcgtgtacatgtacaattttttgatgac
agcccaacaaggggctgggttagtattaaatacttaaagccatataaaggctcagcggtt
agggaaacgcagaggggaggtatgttttacagttcaaagcctgaaattaaaagagcaatg
gaaatggcagatgaggctatgcgtatagataaaactaagcggcttgagctggcagtgtgc
aatgaaccttcagatactgaagatgaggaagagatggaggttagtgaaagtgcttcgggc
aatagtgaagattatgatagtgaggaggaggagaaaaaaaaaaagctgctggcaagcagg
tggagaagtggtgggaaaaccaaaaaacgaagagtggtggactctgacagtaacaatgaa
ggttcagatgaagagtttaagccagatgctaaagatgaagcaagcagcgatgaagcaagc
agcggaatgggcgaaggtgaatctgccagctctgagacagacacaaagatggatgcagat
agtcctgtgaaagtcccttctaaacgaaagagagaaactgaccgcaaacctgctaaaagg
aatagcttggaaaatgaccttcctgaaacacccaaaagagcaataaccgtttcattagaa
accaagtcaaggctgacctcttttgcagcacctgaaaactttgagtctcagccaaatgtt
agcagttctactatatgggaacatgataaacttgaatggcttcaggaaggaaaaaagaga
gatggatgtagaagacgacaaagtgatcctcattatgacccatgtaccctccatgtgcca
gaggactaccttaacaagtgtaccccaggaatgcggaagtggtggcagctaaagtctcag
aactttgatgctgtaatcttctacaaagttgggaagttctatgagttgtatcatatggat
gcagtcactggtgtaaatgagctgggactgatatttatgaaaggtatttgggcccattca
ggttttccagaaatagcatttggcagattctctgatgttctagtacagaaggggtacaaa
gtagtccgggttgaacagacagagactcctgagatgatggaagcacgctgcagatccttg
gcccacccaacaaagtttgatagggttgtacgcagagaaatatgcaggataattaccaaa
gggacacagacctacagtgttctggatggagacccttctgaaaatcttaataaatacctt
ctcagtgtaaaagaaaaagttgaagacacttctggccgccaccgtgcatatggtgtctgt
tttgttgacacatcggtgggaaaattttatgtgggccagtttccagatgaccgccactgc
tccagatttagaactttggtggcacactacactccggtgcagatcctgtttgagaaggga
aatctgtctgcagacacacacaagatattaaaaggctcactctcttcttccatgcaagaa
ggcttgatctctggctcccagttctggaatgcatctaaaacactgaaaactctaattgaa
gaaggctactttgaggataagcaaaatgttgatgagaggtttattctgcctcctgtgatc
aaatccatgacatcagaaattgactctctgggtcttactcctggtgaaaactgtgagtta
gctttgtcagctcttggtggatgtgtcttctacctcaagaagtgccttattgaccaggag
ctcttatctctggcaaactttgaggagtatgttcctgtggacattgatgttgtaaaagct
aaaggatcaagcagtttctttgctaaaactaatcagcggatggtgctggatggggtgaca
ctaacaaacttggaaatcatgcagaatggaactactggcaccacagaaggcacattactg
gaaaggattgacatttgttgtacaccttttggaaagcgactcctgaaacagtggatatgt
acacccctctgtaatccccactccatcaatgatcgtttggatgcagttgaagatcttcta
gcagttcctgataaaatgtttgaagttagtgaacttctgaagaaacttccagaccttgaa
aggctcctgagcaaaattcacagtattggatcaccactcaaaagtgagactcatccagac
aacagggctatcttttatgaagaaaccagatacagtaaaaaaaaaatcactgacttcttg
tctacgttggaaggatttaaagtaatgcttcagatcatagggattatggaagaaattgct
gctgatttcaaatctaaaacacttaagcagttagtcactctgaagtcgaaaaatccagag
ggctgttttccagacctgagtacagaacttaaaagatgggatactgcttttgaccataac
gaggctcgaaagactggagtgattactccgaaggctgggtttgaccctgattatgataaa
gcactaaaggatataacagacattgaagagaatcttcgggagtatttggataaacaacgc
aaacggcttggattcaaagccatgctgtattggggagcaggcaaaaaccgctaccaaatg
gaaatcccagaaaatgcaatatctcacaatttgcctgaggaatatgaattgaagtccacc
agaaagggttacaaacgttactggaccaaggagatagagaagatgctggcggagatggtc
aatgctgaagaacggagagatgcagcgctgaaagactgtatgaggagactgttccacaat
tttgataaaaatagcaaagactggcaaacagcagtggaatgcattgctgtattagatgtt
ttgatgtgcctcgctaactatagtcaagagagtgatggaccattctgccgacctgtaatt
ctactgccagaacagaatactccacccttcttggagcttaaaggttcacggcatccatgc
attacaaaaacgttttttggggatgattttattcctaatgatattgtgataggttccaag
aatgaagatgaagacagcaatagtgaagcctactgtgttttagtaactggcccaaacatg
ggtggcaaatctacactaatgagacaggctggccttttggcaataatggctcagttggga
tgctatgtacctgctgaagcttgcaggcttactcctattgacagagtatttacaagacta
ggtgcctcggacagaatcatgtcaggagagagtaccttttttgttgagctgagtgagact
tccagcatactccggcatgcaacagagcattcccttgtgcttgtggatgaactaggtaga
ggcacagctacttttgatggcacagctatagcaagtgcagttgttaaagaacttgcagaa
aatataaagtgtcgcacacttttttccacacattattattcattagtagaggactattca
cacagtgctgctgtgcgactgggccatatggcatgtatggttgaaaatgagactgaagat
ccaagccaggaaactattacattcctctataaattcattaaaggagcttgtcctaaaagc
tatggcttcaatgcagcaaggcttgctaatattccagaggaagttattcagaaaggtcac
agaaaagcacgagactttgagaaagttacattgtcactgagactgtttaggcacctttgc
ctggtggcagagaatgcagcaggagataaagctgttcctaaactgatgactgtgatcaat
aatctgtaa
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