Dermochelys coriacea (leatherback sea turtle): 119853996
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Entry
119853996 CDS
T09064
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119853996 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcc03021
]
119853996 (CPSF3)
03019 Messenger RNA biogenesis [BR:
dcc03019
]
119853996 (CPSF3)
Transcription machinery [BR:
dcc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119853996 (CPSF3)
Messenger RNA biogenesis [BR:
dcc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
119853996 (CPSF3)
U7-dependent histone pre-mRNA processing factors
119853996 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
119853996
NCBI-ProteinID:
XP_038253706
LinkDB
All DBs
Position
3:complement(31647860..31705761)
Genome browser
AA seq
691 aa
AA seq
DB search
MSAKRKAEAMIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDAL
PYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKV
SNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVK
LLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRG
GRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKI
RKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVI
IAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPH
VILVHGEQNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADK
KPEQGQRVSGILVKRNFNYHILSPCDLSNYTDLAMSTVTQTQAIPYSGPFNLLYYQLQKL
TGDVEEIEIQQKPALKVFKNITVIQEPGMVVLEWVANPANDMYADTVTTVILEVQSNPKI
QKAAVHKISKKVDMDVFSKRMEIMLQDMFGEDCVSAKDGFVLSVTVDGKTANISLDTRTA
ECEPGNEDDESLREMVELAAQRLYDALSPVH
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgaagagaaaagccgaggccatgatcccggccgaggagagcgaccagctgctc
atccggcccctaggtgctggacaagaagtaggaagatcatgcattattctggagtttaaa
ggaagaaaaataatgcttgattgtggaattcaccctggcctagaaggaatggatgccctt
ccttacattgacttgatagatcctgctgagattgatcttctcttaatcagtcattttcat
ttggatcactgtggggctttaccatggtttctgcagaagaccagttttaaaggaagaaca
tttatgactcatgctacaaaagctatttacaggtggcttctttcagattacgtcaaggtt
agcaatatttcagcagatgacatgctgtatacggaaacagatctggaagaaagcatggac
aaaattgaaaccatcaactttcatgaagtaaaagaggtggcaggaatcaagttctggtgt
taccatgcgggccatgtcctgggagcagccatgtttatgattgaaatagctggtgtgaag
ctcttatatacaggtgatttctcaaggcaggaagacagacacttgatggcagctgagatt
cctaatattaaacctgatattcttatcattgaatccacctatggtacccatattcatgaa
aaaagggaagagcgagaagcaagattctgtaacactgttcatgatattgtaaacagagga
ggtagaggtcttattcctgtctttgccttgggtcgagctcaagagctgcttttgatctta
gatgaatactggcagaatcaccctgaactccatgatatcccaatatactatgcctcctct
ttggcaaagaaatgcatggcagtgtatcagacatatgttaatgctatgaatgacaaaatc
cgcaagcaaatcaacatcaacaatccatttgttttcaaacacattagtaatctgaagagt
atggatcactttgatgacattggccccagtgttgttatggcttccccaggtatgatgcag
agtggcttatccagagaattgtttgagagctggtgtactgataagagaaatggagtaata
atagcagggtactgtgttgaaggaacacttgccaagcacataatgtctgaacctgaagag
atcacaactatgtcagggcagaagctcccactgaagatgtctgtagactacatttctttc
tctgctcacacggattaccaacaaaccagcgagtttatcagggcactgaaacctccacat
gtgattttagtgcatggtgagcagaatgaaatggccagattgaaagcagcattaatacga
gaatatgaggataacgatgaagttcacatagaagttcacaatcctaggaatactgaggct
gtgacattaaacttcagaggagaaaaacttgccaaggtgatggggtttttagcagataag
aagccagagcaaggacagcgcgtttcagggatcctggttaaaagaaactttaactatcac
atcctttctccatgtgacctgtcaaattacactgatttggctatgagcactgtaacacag
acacaagctattccgtattctggccctttcaatctgctttattaccagctacagaaactg
acaggtgatgtagaggaaattgaaatccagcaaaagccagccttgaaggttttcaaaaat
attactgtgatccaggaacctggcatggtggtacttgagtgggtggcaaatcctgctaat
gatatgtatgcagacactgtaacaacagtgatcctggaagttcagtcaaatcccaaaata
cagaaagctgcagtgcataagatttcaaaaaaagtagatatggatgtatttagcaaaagg
atggagatcatgcttcaggacatgtttggagaggactgtgttagtgcaaaagatggcttt
gttctaagtgtcacagtggatggaaagactgcaaatatttcattggacacacggactgct
gaatgtgagccaggaaatgaagatgatgaatcccttcgggaaatggtggagttggctgca
cagagactctatgatgccctcagcccagtacattga
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