Dermochelys coriacea (leatherback sea turtle): 119854028
Help
Entry
119854028 CDS
T09064
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dcc03000
]
119854028 (PRDM1)
Transcription factors [BR:
dcc03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
119854028 (PRDM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
Zf-C2H2_ZNF451_C
C2CH-3rd_BIRD-IDD
zf-C2H2_6
zf-C2H2_jaz
zf-C2HE
zf-met
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
119854028
NCBI-ProteinID:
XP_038253793
LinkDB
All DBs
Position
3:82015373..82135540
Genome browser
AA seq
787 aa
AA seq
DB search
MKMDMEDADMTLWTEADFEEKCTYIVNDHPWDPSDDGSTITQAEASLPRNLTFKYTLNCK
EVTGVVSKEYIPKGTRFGPLVGEIYTNNTVPKNANRKYFWRIYSRGELHHFIDGFNEDKS
NWMRYVNPAHSVQEQNLAACQNGMNIYFYTIKPIPANQELLVWYCPDFAERLHYPSSREL
MMNLTQSHVNPKQQSTGKNELYQKSIPKREHSVKEILKTEPNHSKGKDLFQTNISPVTPE
KHLDDLRKNCSPERSFFPRVVYPIRPHIPEDYLKTSLIYGMERPSYITHSPIQSSTTPSP
SARSSPDQSLKSSSPHSSPGVTVSPLAPTSQEHRESYPYLNGPYGSEGLGSYPGYAPPSH
LTPAFLSSYNSHYPKFLLPPYSMSCNNLSGLNNINGINNFNLFPGMYPLYSNLLSGGSLS
HHMLNPAPLPSSLPPEGGRRLLQPDHPRDFLIPAPNSAFSITGAAASMKDKPCSPTSGSP
TAGTAATSEHIMQPKPTSAVLAATSEEAMNLIKSKRNVTGYKTLPYPLKKQNGKIKYECN
VCSKTFGQLSNLKVHLRVHSGERPFKCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHK
RFSSTSNLKTHLRLHSGEKPYQCKLCPAKFTQFVHLKLHKRLHTRERPHKCVHCHKSYIH
LCSLKVHLKGNCPVAPASGLSMEDLNRINEEIEKFDISDSADRLEDVEDNIDMASVVEKE
ILTMLRRELEGASLKVSLQRNMGNGLISSGCNLYESSDMSIMKLPHGHPLPLLPIKVKQE
TVEPMDP
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggacatggaggatgctgacatgactctgtggacagaggctgattttgaagag
aagtgcacatacattgtaaatgatcacccctgggatcccagcgatgatggaagcaccata
actcaggcagaggcgtccttgccaaggaacttgactttcaaatatacattgaactgcaaa
gaggttactggagttgtaagtaaagagtacatcccgaaaggaacacgttttggacccctg
gtaggagagatctataccaacaatacagttcccaagaacgcaaacagaaaatacttttgg
cggatctattccaggggtgaacttcatcacttcattgatggatttaatgaggacaagagc
aattggatgcgctatgtgaacccagcccattctgttcaggaacagaatttggcagcttgt
cagaatggaatgaacatctatttctacactatcaagcccatccctgccaaccaagaacta
cttgtgtggtattgtccggactttgcagagagactgcactatccttcctccagagagctg
atgatgaatctcacacaaagccatgttaatccaaagcagcaaagcactggtaaaaatgag
ctttatcagaaaagtatcccaaagagagagcacagtgtgaaagaaatcctcaaaactgaa
cccaaccattcaaaaggaaaggacttattccagactaacatttcaccagttactccagaa
aaacatttggatgacttgagaaaaaactgtagtccagaaaggtctttctttcctcgtgtt
gtctatccaatccgacctcacattccagaagattatttgaaaacttccctaatttatggg
atggaaagacctagctacattactcactcaccaatccagtcttctaccacaccaagtcct
tcagcaaggagcagcccagaccaaagcttaaaaagctcaagccctcacagcagtccaggg
gttacagtttcacctctggcacctacttctcaagaacatagagaatcttacccatacttg
aatggaccctatggctcagaaggattggggtcttatcctggatatgcaccccctagccat
ctcacaccagcctttttatcctcttataattcccactatccaaaattcctgttacctccg
tacagtatgagctgtaataacctgagcggtttgaacaatatcaatggcatcaacaatttc
aatctgttcccagggatgtatcctctctatagcaacctactcagtggaggaagcctttcc
catcacatgctgaacccagctcctcttccaagttcattgccacctgaaggaggccgtaga
ttgctacaacccgatcatccaagagactttctcataccagcacctaacagtgccttttcc
atcacaggtgctgctgccagcatgaaagacaaaccatgcagccccaccagtgggtccccc
acagctggcacagcagccacttcagaacacataatgcaacctaaacctacctcagcagta
ttggctgccaccagtgaagaagccatgaatctcattaaaagcaagaggaatgtgactggt
tacaaaacccttccatatccactgaagaagcagaatgggaagatcaagtatgaatgcaat
gtttgctccaagacctttggccagctctccaatctgaaggtccacctcagagtacatagt
ggagagagaccattcaaatgtcagacttgcaataaagggttcactcagctggctcatctc
cagaagcactatctggtacacacaggagaaaagcctcatgagtgtcaggtttgccataaa
cgattcagcagcactagcaatctaaagacacatctgcgactccactctggagaaaagcct
tatcagtgcaagctgtgccctgctaaattcacccagttcgtgcacctgaagttgcacaag
cgtctccataccagggaacggccacacaagtgtgtccactgccacaagagctatattcac
ctctgcagcctcaaagtccatctgaaaggcaactgtcctgtagcccctgcctctggcctc
tcaatggaggatctgaatcgtatcaatgaagagattgagaagttcgacatcagtgacagt
gctgacaggctggaagatgtagaggacaatatcgatatggcatctgttgtcgaaaaagaa
atactgaccatgctcagaagagagctagaaggagctagtcttaaagtatctttgcagagg
aacatgggaaatggacttatctcctcaggatgtaacctttacgaatcttcagacatgtca
attatgaagttgcctcacggtcatccactacctctgttacctataaaggtcaagcaagaa
acagttgaaccaatggacccttaa
DBGET
integrated database retrieval system
