Dermochelys coriacea (leatherback sea turtle): 119854220
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Entry
119854220 CDS
T09064
Symbol
PCDH18
Name
(RefSeq) protocadherin-18 isoform X1
KO
K16499
protocadherin delta 2
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dcc04515
]
119854220 (PCDH18)
Cell adhesion molecules [BR:
dcc04515
]
Cadherins
Protocadherins
119854220 (PCDH18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
Syndecan
PepSY
BBS1
Motif
Other DBs
NCBI-GeneID:
119854220
NCBI-ProteinID:
XP_038253970
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Position
4:complement(51608239..51618217)
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AA seq
992 aa
AA seq
DB search
MNCKNLQMHQISSKMHFMFLFVLVIISFSKDVLGKNLKYRIYEEQRVGSVIARLSEDVAD
VLFKIPNPSSVRFRAMQRGNSPLLVVREDNGEISIGAKIDREQLCQKNLNCSIEFDVITL
PTEHLQLFHVEVEVLDINDNSPQFSRALIPIEISESAAVGTRIPLDSAFDPDVGENSLHT
YSLSANDFFNIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDKGVPQRSGSSILK
ISISDSNDNSPVFEQQSYVIQLLENSPVGTLLIDLNATDPDEGANGKVMYSFSSHVSSKI
IETFKIDSEKGHLTLLSQVDYEITKSYEIDAQAQDLGPNSIPAHCKIIIKIVDVNDNKPE
INLNLMSPGNEEIAHISEGSPMDTFVAIVRVQDKDSGVNGEIVCKLHGHGHFKLQKTYEN
NYLILTNATLDREKRSEYSLTVIAEDKGTPSLSTVKHFTVQITDENDNPPRFQTNRYEVV
ILENNSPGAYITSVTATDPDLGDNGQVTYTILESYILGSSITTYVTIDPSNGAIYALRTF
DHEEVNQITFVVQARDGGSQQLVSNTTVVLTIIDENDNAPVIVGPALRNNTAEISIPKDA
ESGFHVTRIRAIDRDSGMNSELSCSIIADNEENIFVMDPRSCDIYINVSIESVSSKEWEF
FVIVQDKGSPPLSTKALLKCTVFEYVYAIPSTEATFISQPSLDVSMITIISLGSICAVLL
VIMVVFATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTVNGTLPIRSH
HRSSPSSSPTLERGQMSSRQSHHSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQL
LSMLHQGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPID
RLLGEGFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEF
QPPPPPPPQQQAFEEDSQPVDANERKRAFQHW
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgaattgcaaaaacttacaaatgcaccaaatcagcagtaaaatgcactttatgttcctt
tttgtactggtgattatatctttcagtaaagatgtgctaggcaagaatttgaaatacagg
atttatgaggagcagagagttggatcagtaattgcaagactatcagaggatgtagctgat
gttttatttaaaattcctaacccttcttcagttcgttttcgagccatgcaaagggggaat
tctcccttacttgtagtccgagaggataatggagaaatcagcataggagctaaaattgac
cgggaacaactctgccagaaaaacttaaattgctctatagagtttgatgtgatcactttg
cctactgaacatctgcagcttttccatgttgaagttgaagtgctggatattaatgacaac
tccccccagttttccagagctctcatccctattgaaatatcagagagtgcagctgtagga
acccggatccctttggacagtgcttttgatccagatgttggggaaaattctctgcacact
tattcactgtctgcaaatgatttttttaatattgaagtgcgaacaaggaccgatggtgcc
aagtatgcagaactcattgtggttagagaattggatcgggagttgaagtcaagctacgaa
ctccaactcaccgcttcagataagggggtgcctcagcgatctggatcgtctatcctaaaa
ataagtatttctgattctaatgataatagtcctgtttttgagcaacaatcatatgtaatt
cagctcttagaaaattcaccagtaggtactttgctcatagacctcaatgccactgatcca
gatgagggcgctaatggtaaagtcatgtattctttcagtagtcatgtatcttccaaaatt
atagagacttttaaaatagactcagagaaaggccatctgaccctcctgtcacaagtggac
tatgaaatcaccaaatcctatgaaattgatgctcaggctcaagatttgggtccaaattct
atcccagctcattgcaaaattatcattaaaattgtggatgtcaatgacaataaacctgaa
attaatttaaacctgatgtcccctgggaatgaggaaatagctcacatttctgaagggtca
cccatggacacttttgttgccatagtcagggtacaggacaaggactctggcgtgaatgga
gagatagtttgcaagcttcatgggcatggccactttaaacttcaaaagacttatgaaaat
aactatttaattttgactaatgctactctagatagagaaaagagatctgaatacagtttg
actgtaatagctgaagacaaggggacgccaagtctctccacagtgaaacattttactgtc
caaatcactgatgaaaatgacaacccaccccgcttccagacaaacagatatgaagttgtt
atcttagaaaataactctccaggtgcatacatcacatctgttacagccacagatccagat
ctaggggacaatggacaggtcacctacactattttggaaagctatattttgggaagttcc
ataaccacctatgtgaccattgacccatccaatggtgcaatctatgcactcagaactttt
gatcacgaagaagtaaatcagattacctttgtggttcaagctagagatggagggagtcag
caacttgttagtaataccacagttgtgctaactattattgatgaaaatgataatgctcct
gtcattgtgggaccagcactacgcaataacactgcagaaatctcaatccctaaagatgct
gagagtggtttccatgtgactaggataagggctatagacagagattctggtatgaattca
gaactaagctgttccataatagctgacaatgaagaaaacatatttgtaatggacccaaga
tcatgtgacatctatattaatgttagcatagaatctgtttcatctaaagaatgggaattt
tttgtgatagttcaggataaaggcagccctccactcagtaccaaagcacttctgaaatgt
actgtttttgaatatgtttatgcaattccaagcacagaagctacctttattagtcagccc
tctctggatgtttctatgataacaattatatcacttggatcaatatgtgcagtgttgttg
gtcattatggttgtctttgctacaagatgcaatcgagagaaaaaggacacaagatcctac
aactgtcgtgtggcagaatcaacttaccagcaccacccaaaaagaccatcaagacagatt
cacaaaggtgacattacacttgtgcctactgttaatggcactttacccatcagatctcac
cacagatcttctccttcatcatctccaacattagaaagaggacaaatgagcagtcgacaa
agccaccatagtcaccaatcacttaacagtctagtgacaatctcatcaaatcatgtgcct
gagaatttctcactggaactcacccatgctactccagctgttgagcaggtctctcagctt
ctttcaatgcttcatcagggccaatatcagccaagaccaagttttcgaggcaacaaatat
tccagaagctacagatatgccctacaagatatggataaatttagcttgaaagatagtggc
cgtggtgatagtgaagcaggagatagtgattatgatttgggtagagattctccaattgac
agacttcttggggaaggattcagtgacctttttcttacagatgggagaattcctgcagca
atgaggctatgcacagaggaatgtagagttctgggacactctgaccaatgctggatgcca
cctctgccctctccatcttctgattacagaagtaacatgtttattcctggggaggaattt
caaccgccgccaccgccgccaccacagcagcaggcatttgaagaagattcacagcctgtt
gatgccaatgaaagaaaaagagcttttcaacattggtaa
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