Dermochelys coriacea (leatherback sea turtle): 119854392
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Entry
119854392 CDS
T09064
Symbol
AFF1
Name
(RefSeq) AF4/FMR2 family member 1 isoform X3
KO
K15184
AF4/FMR2 family member 1
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcc03021
]
119854392 (AFF1)
Transcription machinery [BR:
dcc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
119854392 (AFF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
BamHI
Motif
Other DBs
NCBI-GeneID:
119854392
NCBI-ProteinID:
XP_038254599
LinkDB
All DBs
Position
4:20217246..20387727
Genome browser
AA seq
1219 aa
AA seq
DB search
MASTDTPSSTNGLYNEDRNLLRIRERERRNQEALQERETYPENTPLFAEPYKTNKEDELS
SRIQNMLGNYEEVKELISTKSHQNLIGIPKSIVPLIHQGKPDRPFFPEKTSSTLPTSFQH
STRHQAMGPPSLAPPSASNSIRYPKTQARMEPAASLHTKSHSLSSGQSQGPEQRRSGQES
HHGGRHKKNDKHVDEDGADELQDTLSELSPLLSSLSSPVALLSPLHSSQHIHSRSQSHNK
SHGLTYHPIKSPQDFVAGLNDNEIRDSSAINLAQPSSQTFPPALPPKNSAMLQKPTAYVR
PMDGQDQAPNESPELKPLPEEYPGQPYGKIADLKANAKAKLSKLKIPSEPIEQTFPNEVH
CVEEILKEMTHSWPPPLTAIHTPSTAEPSKFPFPIKESQLVGSAIQNQKQYDAPSKTLSN
SQQGTSMLQDDLQLSDSEDSDDDRVSEKPPPSSAPPSASQSQPESAASAHSSSAESGSTS
DSDSSSDSESESSSSDSEANEPPRTSTSEPDPPTSNKWQLDNWLTKVNQPAAPNENLSEV
VHRPGHQESKGQGKSSSSSSHERSESNELHSKNSSKITRAPQGVHLPSKRTSQKSPTRTE
EPSQRLTVGTKKPSKAPLQEAHRGSLKVESEPGPYGIKDQSSRDKPKVKTKGRPKSRDKK
ELKPTVQEPLEKKKHKSSHQAITKAFLDPKPVKDIVAGGALEHFPLSPVAQSQKPTTPTR
TSGKKPAIVVREDFHRDKLLLPIRDKTLLSPLRDFPVPHALVVKIELCLLSRIPQPPGKG
SRQKKLEVKELPSARKQDLEKKSTETPNKSLKKRKGEAEKETENKRIKLEKETKSLSSSY
RDSSKMKVSKFPSETLKKELLLPPPLPPMSTVQPAQKPAKMAQKRHKGESSTCSQLPATN
NHTAKSKSNHKDSSSSKHRKVEGKHSEHSKSNKLGGPSGDGKNPFPVPSLPNGTSKPRRP
QIKFEKQHPMEYHIEEAKRLKHKADTMTDKVAKAFQYLEAALSFIEYGIAMESDALTPKS
AYTIFTDTIDLLKFIMTLKSFSDTWASAHEKIFAVLCMRCQSILHMAMFRYKKDTAVKYS
RTLNEHFKNSSRVTQAPSPCVARSTGTPSPLSPMPSPASSVSSQPGSNASNCGSGGIGSS
INTLHNIPSITFSYVNITSYILYAYDIWEQADALARKNKEFFAELSTAVCTLALNSSMTE
LVHYTRQGLQWLRLETNTP
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atggcatccacggacacaccaagcagcaccaatggcttgtacaatgaggacagaaatttg
ctccggatcagagagagagagagacggaatcaggaagctcttcaggagagagagacatac
ccggaaaatacccccctctttgcagaaccttacaagactaacaaagaagatgaattgtcc
agtcgaattcagaacatgctgggcaattatgaagaggtgaaggagctaatcagcaccaag
tcccatcagaatctcatagggatacccaagagcattgttcctctgatccatcagggaaag
cctgatcgcccgttctttcctgaaaagaccagcagtacattaccaacctcattccagcac
agcacccgccaccaggccatgggaccccccagtttggctcccccctctgctagtaattcc
atccgctacccaaagacacaagcaagaatggaaccagctgcaagtttgcacaccaaaagc
cacagcttgtccagtggtcagagccaaggcccagaacagagacgcagtggtcaggaaagc
catcatggtggtcgccacaagaaaaatgataaacatgttgatgaagatggtgctgatgaa
ctgcaagacaccctctcggagctttctcctttactgtcctctttgtcttctccagtggca
ctcctgtcacctctacattccagtcagcatatccattccaggtcacagagccacaacaaa
agtcatgggctgacttaccatccaattaaatcacctcaggattttgtggcaggattgaat
gataacgaaatccgggacagttcagccattaatctggcccaaccatcttctcagacattt
cctccagccttgccgccaaaaaacagtgcaatgctgcagaaacctactgcatatgtcaga
ccaatggatggccaagatcaggcgccaaatgagtcaccggagctcaagccgcttccggag
gaataccctggacaaccctatggaaaaatagcagatttaaaagcaaatgccaaggccaaa
ctatccaaattgaaaataccttctgagcctattgagcaaaccttccccaatgaagtccat
tgcgttgaagaaattttgaaggaaatgacccactcatggccacctcccttgacagctatt
catacgcctagcacagctgagccttcaaaatttccttttccaataaaggaatcccagctt
gttggatctgcaatacagaatcagaagcagtatgatgcaccttcaaaaacattgtctaat
tcacagcaaggaacatcaatgctacaagatgacctccagctcagcgatagtgaagacagt
gatgatgatcgggtgtctgaaaagccacctccctcatctgctcctccaagtgcctcacaa
tcgcagcctgagagtgcagcatcagcgcattccagcagtgcggagtcagggagcaccagt
gactccgacagctcttcagattcggagagtgagagcagttcgagtgacagcgaagcaaac
gagccaccgaggacttctacgtctgagcccgacccaccaacatcaaataaatggcagctg
gacaactggctaaccaaggtgaaccaaccagcagcaccaaatgagaatctcagtgaagtt
gtccatagacctggtcatcaggagagcaagggtcaagggaaaagcagcagcagcagctct
catgaacgttctgaatcaaatgagttgcactccaaaaactcaagcaaaataaccagggct
ccccagggggtacatcttcctagcaaacggaccagccagaagtctcccacgcgcactgag
gagccctctcagaggctcacagttggtaccaagaagcccagcaaggccccgctacaagag
gctcacaggggaagcctgaaagtggaaagtgagcctggtccatatgggattaaagaccag
tcttccagagacaagcccaaagtaaaaacgaaagggaggccaaaatccagagataaaaaa
gaattgaaaccaacagtgcaagagcccttggaaaagaaaaagcacaagagctcacaccaa
gccattactaaagcatttttggaccctaagcctgtgaaagacattgtggctggtggtgcc
ctagaacatttccctctcagccctgtagctcaaagccagaagcccaccacccccaccagg
actagtggcaaaaagcctgccattgtggtcagagaggacttccatagagacaaacttctc
ttgcctatcagggataagacgttgttatcgcccctgagggattttccagtccctcatgct
cttgtggttaaaattgagctgtgtctcctttcaagaattccacagccacctgggaaaggg
agtcgccagaagaaacttgaggttaaagagctcccaagtgcgaggaagcaggatttggaa
aagaaaagcacagaaactcctaacaagtctctcaaaaagagaaagggagaagcagagaaa
gagactgaaaataagagaatcaagctggagaaagaaaccaaatcattgtcttcaagttac
agagactccagtaaaatgaaagtatccaaatttccatccgagacactgaagaaagagctc
ctgctaccaccaccgctgccaccaatgtctactgtgcagcctgcccagaagccagccaag
atggcacaaaagagacacaagggtgagagcagcacctgcagccagctgcctgccacaaat
aaccacactgccaagagcaagagcaaccacaaggattcttcatcctccaagcacaggaaa
gtggaggggaagcattctgaacattctaaaagcaacaaactaggtggaccttcaggagat
ggcaaaaaccctttcccggtgccttctttgccaaatggtacctccaagccaaggagacct
caaatcaagtttgaaaaacaacatccgatggagtatcacatagaggaggccaaaagactg
aagcacaaagctgacacaatgacagacaaggttgcaaaggcatttcagtacttggaggct
gccctttccttcatcgagtatggaattgctatggaatctgatgcactaacaccaaaatca
gcatacaccatattcacagacaccatagatctccttaaatttataatgacattaaaatcc
ttttccgatacctgggcatctgcacatgaaaaaatatttgctgttttgtgcatgcgctgc
cagtccattctgcacatggcaatgtttcgttacaaaaaagacactgcagtaaaatattcc
cgaaccctcaatgaacacttcaagaattcttccagagttacgcaagcaccttctccatgt
gttgcaagaagcacaggcacaccttctcctctttccccgatgccctctcctgccagctct
gtgagctcccagccaggatcaaacgcgagcaactgtggcagtggaggcattggttcttca
atcaacaccttacataatatcccaagcataaccttttcctatgtcaatatcacttcctat
atcctctatgcctatgatatttgggagcaggccgatgctctggccaggaagaataaggaa
ttctttgccgaactcagtacagcggtgtgcactctggcactgaacagtagtatgactgaa
ctggtacactacactaggcagggtttacagtggctgagactggaaacaaatacgccttaa
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