Dermochelys coriacea (leatherback sea turtle): 119854418
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Entry
119854418 CDS
T09064
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119854418 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcc03021
]
119854418 (POLR1A)
Enzymes [BR:
dcc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119854418 (POLR1A)
Transcription machinery [BR:
dcc03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
119854418 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Nop14
Utp13
Motif
Other DBs
NCBI-GeneID:
119854418
NCBI-ProteinID:
XP_038254703
LinkDB
All DBs
Position
4:complement(131511385..131567189)
Genome browser
AA seq
1708 aa
AA seq
DB search
MRPSREVPWRQLAGISFGMYTAEEIRKLSVKAITNPRYLDNMGNPAVNGLYDLSLGPPDA
KEVCTTCMQDFNNCPGHLGHIDLPLTVYNPLFFDKLYLLIRGSCLNCHLLTCTRAVVHLL
LSQLKVLERGLLHAVCDLEAILNRFLDENTDASGLDIEEELNRHVNEILQNNQLGDQCSH
VKNVCECRSKLIAQFWKLHMTSKRCPNCKSRRSQVRKEHNSKLTVTYPTVVQQKSGKEAI
VEEPAIIDETQLGKRGYLTPITAKDHIVALWKNEGFFLNHLFSGLEVGENSGFSPDMFFL
DLLVVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDVQLIRKLLAFMAQEQTQPIKLVENE
IQKVTDEPLESLDRSVLAMISGQSTADKLYNIWIRLQSHVNIVFDSDMDKLMTEKYPGIR
QILEKKEGLFRKHMMGKRVDYAARSVICPDMYIATNEIGIPMVFATKLTYPQPVTPWNVK
ELRQAVINGPNVHPGASMVVNEDRSRTVLSATSQTQREAIAKQLLTPSTGAPKPGMKIVC
RHVKNGDVLLLNRQPTLHRPSIQAHRARILPGEKVLRLHYANCKAYNADFDGDEMNAHFP
QSELGRAEAYMLACTDEQYLVPKDGKPLAGLIQDHMISGASMTIRGCFFTREQYMELIYR
GLTDKKGRVKILPPAIRKPQRLWTGKQVVSTLLINVIPENQIPLNLSGKAKIGGKAWVKG
PQNRIPGSNFDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCHEVYGGETSGKVLT
CLARLFTAYLQLYRGFTMGVEDILVKPQADHRRHRIIEVSTHCGTRAVRAAFNLPETASC
EEVQGKWQDAHLHKDQRDFNMVDLKFKEEVNNYSNEVNKACMPLGLHRSFPENNLQLMVQ
SGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFQPYDFSPRSGGFVTGRFLTGI
KPAEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLSVRDSDGSVVQFLY
GEDGLDIPRTQFLQPRQFPFIADNYEVIQKSKHIDEVLSKIDSQQANQHFKAIKKWKTKH
QVSLPRGGAFLLYSQKKMARVREQTLGGEIINGRDPATLQLLKMWYELDEKNRRKYLKRA
SKCPDPSLAVWRPDIYFSSVSEAFESEVENYINEWNAQNNSNYVKSDLSCDRLNSLLHLK
WQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANI
KTPMMSVPVFSTKKAHKKVKRLKKQFTRVCLAEVLQKVEVEESLCIEGKLSKHRLYQIKF
YFLPYEYYREEKCLKPRDILYFMETRFFKILLETIKRKSAKLASFNVVNTRKATRRDLDG
SGGESQENQAQDDHEADEEEAGRLVDGEADEGDADATDTKRREKQEEEVDYESEEENSEE
NGDENPEEDEGMLHDDKRAEDAEEGVQNESNCQTKKEKGPKLEHSTQLRVSAVMSSHPSI
VNYAYDTESELWCEVSLKLPLMKAYFDLSSILTSLMQNTIVHETRGITRCFLNESTNKKG
EREFVLNTEGINLPELFRYADLLDLSRLYSNDIHAMAKTYGIEAALRVIEREIKDVFAVY
GIVVDPRHLSLVADYMCFEGVYKPLNRFGMQSNSSPLQQMTFETSYKFLKEATMKGAHDE
LRSPSACLVVGKVVRGGTGLFDLKQPLT
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgtccagagaggtgccgtggcggcagctggccggtatttccttcgggatgtac
acggccgaggagatcaggaaactaagtgtaaaagccataaccaaccctcgttacctagat
aacatgggcaacccagctgtaaatggactgtatgacttgtctttgggacctcctgatgcc
aaagaagtgtgtaccacttgtatgcaggacttcaacaactgtcccggacacctaggccac
atagatctgccactgactgtctacaatcctctattttttgataaattatatcttctgatc
cgaggttcttgtttaaactgtcacttgctgacctgtactcgagctgtggttcacctattg
cttagccagctgaaggtcttggagaggggattgcttcatgcggtctgtgatcttgaggcc
atcctgaataggtttttggatgaaaacacagatgcatctggtttagacatcgaagaagag
ttaaatcgtcatgtgaatgaaatactacaaaataatcaactaggagatcagtgctcacat
gtaaaaaatgtgtgtgagtgtaggagtaaactaattgcacagttttggaaactgcatatg
acttcaaagagatgcccaaactgcaaatctagaagatcacaggtacggaaagagcacaat
agcaagttgacagtaacctaccccactgtggtacagcagaagtctggcaaagaggccatc
gtggaggagccagcaattatagatgagactcagttggggaaaagaggttacttgacaccc
atcactgccaaagaccacattgtggctctgtggaagaatgaaggtttctttctaaatcac
ctcttctctggtctggaggtgggtgagaattcaggattcagccctgatatgttctttcta
gatctccttgtggttccaccttcaaggtatcgtcctgtgaatcgtcttggagaccagatg
tttacaaatggtcaaactgtgaacttgcaggctgtcatgaaagatgtccaattaataagg
aagcttctggctttcatggctcaagaacaaactcaaccaataaagcttgtagagaatgaa
atccagaaggtgacagatgagccattggaatcactagatcgttcagtcctggctatgatc
tcagggcagagcactgcagataaactgtacaacatttggattcgtcttcagagccatgtc
aatattgtgttcgacagtgacatggacaaactaatgacagaaaaatatcctggtatccgt
cagatactggagaaaaaggaaggactgttccgcaagcacatgatgggaaaacgtgtggat
tacgctgctcggtcagtcatctgccctgacatgtacattgctaccaatgagattggtatt
cctatggtatttgctaccaaattgacttaccctcagcccgtaactccgtggaatgtcaaa
gaactgaggcaggctgtcataaatggtccaaatgttcaccctggtgcctccatggtcgtt
aatgaagacaggtcacgtacagtgttgagtgcaaccagccagacccagagggaagccata
gctaagcagctcctcactccttccactggagccccaaaaccaggaatgaaaattgtatgt
cgccatgttaaaaatggagatgtcctcttactgaaccgtcagcccacccttcacagaccc
tctatccaagcccaccgggccagaatcctgccaggagaaaaggtgctgaggcttcactat
gccaactgcaaagcctacaatgctgattttgatggtgatgaaatgaacgctcattttcct
cagagcgagctgggccgggcagaagcctacatgttagcctgcaccgatgaacagtatctt
gttcctaaggatggcaagccactggcaggtttgatccaggatcatatgatctctggtgcc
agcatgacgatccggggctgctttttcacaagagaacagtacatggagctgatatatcga
ggactgacagacaaaaagggaagagtgaaaatccttccacctgccattaggaaaccacag
cggttatggacaggaaaacaggttgtttctacgttgctaataaatgtaatccccgaaaat
caaatcccattgaatttgtccgggaaagctaagattggtggaaaagcctgggtaaaaggg
ccccaaaacagaattcctggatctaactttgattcaatgtgtgaatcccaggttatcatt
agagagggggagttactttgtggggtcttggacaaagctcactatggcagctctgcctat
ggcctagttcactgttgccatgaagtctatggtggtgaaaccagcggcaaggtgcttaca
tgtctagctcgcctctttactgcctatttgcagctgtacaggggatttacaatgggagtt
gaagatattttggtcaaaccgcaagcagaccacagaagacaccgaatcattgaagtgtcc
acccattgtggtactagggctgttagagctgcatttaacttgccagaaactgcatcgtgc
gaagaggtccaagggaaatggcaagatgcccatctccacaaagaccagagggattttaat
atggttgatctgaaattcaaggaggaagtaaacaattacagcaatgaggttaacaaggca
tgcatgccccttggtctccacaggagcttcccagagaacaacttgcagttaatggtgcag
tcaggagccaaaggatccactgtaaatacaatgcagatttcatgcttgctgggtcagatt
gagttggaaggtcgaaggccccctctgatggcatctggtaaatcgttgccttgtttccag
ccttatgatttttcccctagatcagggggatttgtgactggcagatttctcacaggcatc
aaacctgctgaattcttctttcactgcatggctggcagggaaggtctggtggatacagct
gtcaaaaccagccgatcaggataccttcaaaggtgtatcataaagcacttggaagggctg
gtagttcagtatgacctgagtgtgagggacagcgatggcagcgtcgtgcagttcctttat
ggtgaagacgggctagatatccccaggacccagttcttgcaacccaggcagtttcctttc
attgcagataactatgaggtgatacagaaatctaaacacatagatgaagttctatccaag
atagattctcagcaagcaaatcaacacttcaaagctatcaaaaagtggaaaaccaagcat
caagtttctttgccaagaggaggcgcttttctgctgtattctcagaaaaaaatggcgaga
gtgagggaacagaccctaggaggagagatcataaatggcagagaccctgcaaccctacag
ttactgaagatgtggtatgaactggatgagaagaaccggagaaaatatctaaagagggcc
tctaagtgtccagaccccagcctggctgtctggcgtccagatatttatttttcatctgtt
tcagaagcatttgaaagtgaagtagagaattacatcaatgaatggaatgctcagaacaat
agcaactatgtaaaatcagacctttcttgtgatagattaaacagcttgttgcatttgaag
tggcaaaggtccctgtgtgacccaggagaggctgtgggtctccttgctgctcagagcatt
ggggagccttccacgcagatgactctgaacacctttcattttgctggcagaggtgaaatg
aatgtcacattgggtattccaaggttgcgggagatcctcatggtagctagtgctaacatt
aaaactccaatgatgagcgttcctgtgtttagtaccaagaaagctcacaagaaggtgaaa
aggcttaagaaacagtttacaagagtgtgcttagccgaggtcttgcaaaaagttgaagtt
gaggagtctctgtgcatagaagggaagctaagcaaacaccgtctctaccaaatcaaattt
tatttcctgccatacgaatactatcgggaggagaagtgtctgaagccgagggacatcttg
tacttcatggaaacacgattctttaaaatcttgctggaaacgattaaaaggaagagtgca
aagctggcatctttcaacgtggtcaatactcgtaaagcaactcggagggatctagatggc
agtggtggagaatcccaagaaaatcaggcacaggatgatcatgaagctgacgaggaggaa
gcagggaggctcgttgatggtgaagcagatgaaggggatgctgatgctacagatacaaaa
cgaagagagaagcaggaagaagaggttgattatgagagcgaggaagagaacagtgaggaa
aatggtgacgaaaatccagaagaggacgaaggcatgttgcatgatgataaaagggctgag
gatgctgaagaaggggttcagaatgaatctaattgtcagactaaaaaagaaaaaggaccc
aaactagagcattcaacacagctaagagttagtgctgtgatgagcagtcatccatctata
gtcaactacgcatatgatacagaaagtgagctctggtgtgaggtttcactgaagcttcct
ctgatgaaggcatactttgatctctcctccatcctaacatccctcatgcagaacacaatt
gtccatgagacgagagggatcacgcggtgcttcttaaatgaaagcaccaataagaaagga
gagagagaatttgttttaaacaccgagggaataaacctcccagagctattcagatatgct
gatcttttggacctaagccggctttattccaatgacattcatgcaatggctaagacctat
ggaatcgaggctgccctgagggtgattgaaagggaaattaaagatgtgtttgctgtgtat
ggtattgtggtagatcctcggcacctttctcttgtggcagattacatgtgttttgaaggt
gtttacaaaccactgaatcgttttggaatgcagtccaactcctcccctctgcaacagatg
acgtttgaaaccagctacaaatttttgaaggaagcaacaatgaagggtgcccatgatgag
ctgagatctccttctgcatgcctggtggttggaaaagttgtcagaggagggactggtttg
tttgacctcaagcaaccccttacgtag
DBGET
integrated database retrieval system
