Dermochelys coriacea (leatherback sea turtle): 119854620
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Entry
119854620 CDS
T09064
Name
(RefSeq) probable ATP-dependent RNA helicase DDX60 isoform X1
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcc03019
]
119854620
Enzymes [BR:
dcc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119854620
Messenger RNA biogenesis [BR:
dcc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
119854620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN-like_DDX60
DEAD
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
119854620
NCBI-ProteinID:
XP_038255321
LinkDB
All DBs
Position
4:complement(70938882..71012471)
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AA seq
1776 aa
AA seq
DB search
MASGGTVQDGSDDDGGDLTAQNLEQKSVFFEDQVENKSGCSDFSNVFCWEKEIQQVSRAS
DYSRQDNYDFRNPELDKHIGLLEKISDFILNDIPKAEYVSLLNDYVESEFFLIDGDSLFI
TCISEQTLLLGQNLHFFYLVECFLLDLTNKGAKYIIVFFKDAEHAYYRHPTLLSLRTTLI
LHLQHNTDAVIHTEFSNFLEGKWQSFLQESYPYFIIISDDGLTKLQTSFLNLFIIHALSK
RINVVLTSGQESDFIRVYGYHIHGMYKHKEFFSQHQKEIPLVFQTLVEDLQESSTAALLS
LSGHSSMKDMKKEVCETLSQLKHVWPEISDIRHIVCIVTCALGLRTYSRLQKKHQAAIRK
QGKSREITPEEAEDLIRMYCLSVVFLFHLPLSQRARVRLISYHWSKQAFTFIQMHKGCEF
FLLKHLTTEKLWKVDFTHLPDLSDDLLWKNVAYYCEVENEQGLNLDMGEKIKREYEYLWS
IISKLAGKDDDGKSLPLRRTSTSFLKKRASPTKESKNIPNLGLIPMTSMVVDEFAGDILS
SLPFLKSDDSAVTSLIKQKEFDEIRHWHSGKLLSDDYDRTKSSSQAMCKDPWALQNNQKL
QTFLRFYGSSLEGNISKTVVTQLDTPKKAYSDMKNSKKIHKTKAEIIIEENQKRMKAEEE
KREQKQWDALSIEKLIQENFNSGISKLEDFLKKCQSNSVKCTAEMAGLNTCFEVWLEQCK
DQGKKVKDINAAVEVMRRIHSLLEKYKDVMEKTDFQKIVRCLRYFGFDNLACTLDSSQIP
EDDRKEKKAKISKYAVGMGAARFQLQYMGHCLLREERTDRDPRIQHFIPDTWQRDLLDIV
DNNESAVIVAPTSSGKTYASYYCMEKILKESNEGVVVYVAPTKALVNQVWATVYNRFNKT
LPDGMVVCGIFTRDYRHDALNCQVLVTVPQCLEILLLSPHRQQWAKRIRYVIFDEVHCLG
GEIGAEVWEHLLVLIRCPFLALSATISNPKHLTEWLQSVKRYWQHVESVREESSGSSTTT
KKSTKKQKNIKTVNKSYKVKLVLYGERYNDLEKYVCSLEDNDFKIHHYHPCAALTVDHIG
KYGFPSDLAFSPRESILLYDCMVQVWENWPRADELDPEKFTHFKNKIVITKADARKYEEE
LKEELKNWIVHDNRMKANKVLKLLKPYPTYCSEKNMENNFPCFVEKLRQMDKLPALFFLF
NIKNVEKWAENIKNCLEKKQKSKQMPKTEKQVHLLTNRLKKMEKSMQKNQTVGMKITSSK
IDKMILEEAEHENLMEKLGKITEIPPDCTYANSQAVDTEILQKVIHQVKFMKTNKTLKTL
ALRGIGYHHASVSQKGRQMVEMLFRMGFIQVVTATGTLALGINMPCKSVVFTQNSVYLDA
LNYRQMSGRAGRRGQDLLGSVFFYDIPLPKVDKLIKSNVPQLRGQFPLNISLALRLMLLA
AKADDKEDAKAKVLSLLKHSLLSFNQPRVVEILKLYFLFSLQFLVKEGYLDQEGNTMGFA
GLVSHLHYHEPSNLVLVSFLVKGLFHKLCQPMRKDSKTFSKEVMEQLVLVLANLFGRRYI
PASVIKSKQKFYQSKVFLEDLPEDFAVALHEYNNKIEENFGPFLFIISKVADMKQEYQLP
LSRTDFSGEECNDSKLVSHLMSCNEGRTAVSPFACLSGNMDSDLLHAETVNSVILRTVGI
TAGNIPVLCAKKFDNRRRMMPLNAYALDFYKHGSLKAMAQDNGIHEGAAYLLLKDFSLTI
KAISVSLSELCDDDEDNVVQAFCQLSDSYWEKLQKV
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atggcttctggaggaactgttcaagatggcagtgatgatgatggtggagacctcacagcc
caaaaccttgaacaaaaatctgtattttttgaagatcaagtagaaaataaaagtggctgc
agtgacttttcaaatgtgttttgctgggaaaaggagatacagcaggtttcaagggccagt
gattatagcagacaagacaactacgatttcagaaatccagaactagacaaacatatagga
cttctggagaaaatatctgacttcattttgaatgacataccaaaagctgagtatgtaagc
ttactcaatgattacgttgaatctgagttttttctgattgatggagattcattgttcatc
acttgcataagtgaacagacattactgctgggacagaatctgcacttcttttacctggta
gaatgctttctactggatttaacaaacaaaggagcaaaatacatcattgttttcttcaag
gatgcagagcatgcatattacaggcatccgactctcctgtccttacgtactacactgatt
ctccatcttcagcacaatactgatgctgtcattcacactgaattttccaactttttagaa
gggaagtggcaatcttttctgcaagaaagctacccatattttataataatctctgatgat
ggactgactaaactacagacaagctttctcaatttatttatcattcatgccttgtcaaaa
agaatcaatgttgtccttacttctggacaagaatcagattttatcagagtttatggatat
cacatccatggcatgtataagcacaaggaatttttctctcagcaccaaaaagagattcca
cttgttttccaaacactggttgaagacttgcaggaatccagtacagcagctttactttct
ctctctggacattcaagtatgaaggacatgaaaaaagaggtttgtgagacattatcccag
ctcaagcatgtttggccagaaatatctgatattcgacacattgtctgcattgtcacatgt
gcactggggctgagaacgtacagtaggttacaaaagaaacaccaggctgccattcgaaaa
caggggaagagtagagaaataacaccagaagaagctgaagacctaatcaggatgtattgc
ctgagtgtggtttttcttttccatttacctctttcacaacgagctcgggttaggttaatc
agttaccattggagtaaacaagctttcacatttatacaaatgcataaaggttgtgaattt
tttcttctgaaacacctgacaactgaaaagctgtggaaagtggatttcactcacttgcct
gatttaagtgatgatcttttgtggaagaatgttgcatattactgtgaagtagaaaatgag
caagggttaaacttggatatgggggaaaaaattaagagagagtatgaatatctgtggagt
atcatatcaaaactagctggaaaggatgatgatggaaagtctttgcctctgaggagaact
tctacatcttttcttaaaaaaagagcttcaccaactaaagaatccaagaatattcctaat
ctaggtctgatacccatgacatctatggtggtggatgaatttgctggagatattttaagt
agcctaccatttttaaagagtgatgactctgctgttacttcacttattaaacaaaaagaa
tttgatgaaattcgacactggcattcaggaaagcttctcagtgatgattatgacagaaca
aagtccagttctcaagcaatgtgcaaagatccatgggcccttcaaaacaatcaaaagttg
cagacttttctacgcttttatggatcatcactggaaggcaacatttcaaaaacagttgta
acccaattggatactccaaagaaggcttattctgacatgaagaacagcaaaaaaattcat
aagaccaaagcagaaataattattgaagaaaaccaaaagagaatgaaagctgaagaggaa
aaaagagaacagaaacaatgggatgctctttccattgaaaagctaatacaagagaatttt
aactctggaataagtaaactagaggattttctcaagaagtgtcaaagtaattctgtgaaa
tgtactgcagaaatggcaggattgaatacttgctttgaagtgtggctagaacaatgcaaa
gaccaaggaaagaaagtgaaagatataaatgcagctgttgaagtaatgagaagaatccat
tccttgctggaaaaatataaagatgtaatggagaagacagattttcaaaagattgtcaga
tgtcttagatactttggatttgacaatttagcatgtactttagattcttcccagattcca
gaggatgacagaaaagagaagaaggcaaagatttctaaatatgctgttggcatgggagca
gctcggtttcagctacagtacatgggtcattgcctgttacgagaagagagaacagatcga
gatcccaggatccagcattttattccagatacatggcagcgagaccttcttgacattgta
gataataatgaatctgcagtgattgtagcccctacctcatcagggaaaacatatgcctcc
tactactgcatggagaaaatcctgaaagaaagtaacgagggggtggttgtgtatgttgct
ccaacaaaggctcttgttaaccaagtgtgggcgactgtttataatcgatttaacaaaaca
ctgcccgatggcatggtagtatgtggcattttcacgagagattaccgccatgatgctctg
aactgtcaggtactagtgacagtgcctcaatgcttagaaatcctgctgctgtcacctcac
cgccagcaatgggccaaaaggatcagatatgttatatttgatgaggtccattgtcttggt
ggtgaaattggagcagaagtttgggagcaccttctagttttgattcgatgtccatttttg
gctctctctgcaactattagtaaccccaaacatcttactgagtggctacagtcagtaaag
aggtactggcagcatgttgaaagtgtaagagaagaaagctctggttcttctacaactacc
aagaaaagcactaaaaaacaaaagaatatcaagacagtaaataaatcatataaagttaaa
ttggtgctttatggagagagatacaatgatctggaaaaatatgtgtgttccctagaggac
aatgacttcaaaattcatcactatcacccatgtgctgccctaactgtggaccatataggt
aaatatggcttcccttcagacctggctttttctccacgagaaagtattttactgtatgac
tgcatggtacaagtctgggaaaactggccaagagctgacgagctagatcctgagaagttt
acacattttaaaaataaaatagtaatcacaaaagcagatgcaagaaaatatgaagaagaa
ttgaaggaagagctaaaaaattggattgtacatgacaacagaatgaaggctaacaaagtg
ctaaagttactcaaaccctatcctacctattgttcagaaaaaaacatggagaacaatttc
ccatgttttgtggaaaaactaagacagatggataaactgcctgcattgttttttctattc
aacattaaaaacgtggaaaaatgggctgaaaatataaaaaactgtctggagaagaagcaa
aagagtaaacaaatgccaaagactgaaaagcaagtacatttgctaacaaacagattgaaa
aaaatggaaaagtccatgcagaagaatcagactgttggcatgaaaattacatcaagtaaa
attgataaaatgatacttgaggaggctgagcatgaaaatttgatggaaaaacttgggaag
ataactgaaatccctccggattgcacctatgcaaatagccaagctgttgatacagagatt
ttgcagaaggtgattcatcaagtgaagttcatgaaaacaaataaaacactgaaaacactg
gcactgagaggaattggatatcatcatgcttctgtgtcacaaaaaggaagacagatggtg
gagatgctcttcaggatgggatttatccaggtggttacagctactggaacactcgcttta
ggaatcaacatgccatgtaaatcggttgtcttcacacagaattctgtgtatttggatgct
ctgaactatagacagatgtccggacgtgctggacgacgtggtcaagacttgctgggaagt
gtgtttttctatgacattccattgccaaaagtagacaagcttataaaatccaatgtacct
cagctgagaggccagttccctctgaatatttccctggcactgagacttatgctgttggct
gcaaaagctgatgacaaagaagatgcaaaagcaaaggttttatcattgttgaagcattca
cttctctccttcaaccagccaagagtcgtggagatattaaagctctactttttattttct
ttgcaatttcttgtcaaggagggatatttggatcaagaaggcaacaccatgggatttgct
ggacttgtaagccatctgcattatcacgaaccttccaatcttgtcctagtcagctttctt
gtgaagggcttgttccacaaactgtgccagccaatgaggaaagactcaaagacattttcg
aaagaggtgatggaacagctagtgctagtactggcaaatctgtttggaagaagatatatc
ccagccagcgttattaaatctaaacagaagttttaccagtcaaaggtgttccttgaagat
ctcccagaagactttgctgttgcattacatgagtacaacaacaaaatagaggagaatttt
ggcccttttttatttattatttccaaggtggctgatatgaaacaagaataccaactgcct
ctttcaaggactgatttttcaggtgaagaatgcaatgactctaaactggtgtctcacttg
atgagttgtaatgagggaagaacagctgtttcaccttttgcatgcctgtctggaaacatg
gatagtgatttacttcatgcagagactgtcaacagtgtcatattacgcacagttggtatt
actgctggaaatattcctgtactttgtgcaaagaaatttgataatcgaagaagaatgatg
ccacttaatgcttatgcacttgacttctataaacatggctctttgaaagcaatggcacaa
gataatggtatccatgaaggagcagcttatcttctgctgaaagatttttcactcactatt
aaagctatcagtgtttctctaagtgaactttgtgatgatgatgaggacaatgttgttcag
gcattttgccaactcagtgacagttattgggaaaaactgcaaaaagtctaa
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integrated database retrieval system
