Dermochelys coriacea (leatherback sea turtle): 119854649
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Entry
119854649 CDS
T09064
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03020
RNA polymerase
dcc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119854649 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
119854649 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcc03021
]
119854649 (POLR2B)
03400 DNA repair and recombination proteins [BR:
dcc03400
]
119854649 (POLR2B)
Enzymes [BR:
dcc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119854649 (POLR2B)
Transcription machinery [BR:
dcc03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
119854649 (POLR2B)
DNA repair and recombination proteins [BR:
dcc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
119854649 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
119854649
NCBI-ProteinID:
XP_038255402
LinkDB
All DBs
Position
4:2925437..2954136
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPDQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSI
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgcggacgaagatatgcaatatgatgaagatgatgatgaaatcactccagat
ttatggcaagaagcatgctggatagttattagctcctattttgatgagaaggggttggtc
cgacaacagctggattcttttgatgagttcattcagatgtctgtgcagagaattgtagaa
gatgcaccacctatcgatctacaagctgaagctcagcatgccacaggagaagttgaagaa
ccgccacgatatctgctgaagtttgaacaaatctatctctccaagcctacgcattgggaa
agagatggtgcaccatcacccatgatgcccaatgaagccagactgagaaatcttacatat
tctgcccccttgtatgtggatataactaaaacagttattaaagaaggagaggaccagtta
cagacacagcatcagaaaacctttataggaaaaattcctatcatgctccgttcaacatac
tgcctgttgaatggcttgactgatcgtgatctttgtgaactgaatgaatgtcctcttgac
cctggtggctatttcattattaatggatcagaaaaggttctgattgctcaagagaagatg
gctacaaacacagtgtatgtgtttgcaaagaaagattcgaaatatgcttacacaggagaa
tgtagatcctgtctggagaattcctctcgaccaactagtactatatgggttagcatgctg
gccagaggagggcagggtgcaaagaagagcgctattggtcagcgtattgtagcaactctg
ccgtatatcaaacaagaagtgcccatcattattgttttccgtgcattaggttttgtatct
gacagagacattttagaacacataatttatgactttgaagatcctgagatgatggaaatg
gtcaagccttccttggatgaagcatttgtcatccaggaacagaatgtagcattaaacttc
atcggatcaagaggtgcaaagcctggtgttaccaaagagaaaagaattaagtatgcaaaa
gaagtcttacagaaggaaatgcttccacatgttggtgtcagtgacttttgtgaaaccaaa
aaggcctattttctgggatatatggttcatagattactactggcagctctgggcagaaga
gaactcgatgacagagatcattatggcaacaaaagacttgatctggcagggccattgctt
gcattcttgttcagaggaatgtttaagaatttgctcaaagaagtgagaatatacgcacaa
aaatttattgacagagggaaagattttaacttggaactggcaattaaaacaaggattata
tcagatggtttgaagtactcattggctactggaaactggggtgatcagaagaaagctcat
caggccagagcaggagtatctcaggtgttaaaccgcttgacctttgcatccacactttcc
cacttgagacgcttgaattctccaattggtagagatggtaaactagcaaagcccagacag
ctgcacaatacattgtggggaatggtctgtcctgctgagactccagagggccatgcagta
ggacttgtgaagaacttagccttgatggcttacatttctgtggggtctcagccatctccg
attctggaatttttagaagaatggagtatggaaaatctggaagaaatatctccagcagcc
attgcagatgcaaccaagatctttgttaatggctgctgggtaggaatacacaaagatcca
gatcagctgatgaacacactaagaaaattacgtcgtcagatggacataattgtatcagag
gtctctatgatcagggatattagggagcgagaaatccgcatctatactgatgctggcaga
atctgcaggccacttttaattgtggaaaaacaaaagcttctgttgaagaagaggcatatt
gaccaactaaaagaacgagagtataacaactacagttggcaggatctcgtggccagcggt
gtagtagaatacatcgatacgctagaagaagagactgtgatgctggcaatgactccagat
gacttgcaggagaaaggagttgcatactgttcaacttacacgcattgtgagattcacccg
tccatgatcctaggagtctgtgcatctattattcctttccctgatcacaaccagtctcct
aggaacacataccagtctgctatgggtaaacaagctatgggagtttatattacaaacttc
cacgttcgtatggatacactagcccatgtgctgtattaccctcaaaaaccccttgtgact
acacgttctatggagtacttgcgatttagagagttgccagcaggtatcaactcaattgtg
gccatcgcgtcatacaccggttataatcaggaagactctgtcatcatgaaccgttctgct
gtcgatagaggttttttcagatctgttttctatcgctcatataaagaacaagaatccaag
aaaggatttgaccaagaagaagtttttgaaaaacctacacgtgaaacttgtcagggtatg
aggcatgccatctatgacaaactagatgatgatggtttgatagcacctggtgtacgtgtg
tcaggagatgatgtcatcattggcaaaacggtaactcttcctgagaatgaagatgaattg
gaaagcactaacagacgatacacaaagagggactgtagcactttcctacgaactagtgag
actggtattgtagaccaggtcatggtaacccttaaccaggaaggatataagttttgcaaa
attagggtgcgctctgtgagaatcccacaaattggagataaatttgccagcaggcatggt
cagaagggtacctgtggtatccagtacagacaggaggatatgcctttcacctgtgaaggt
atcacacctgacataatcatcaacccccatgccatcccttcccgtatgacaattggtcac
ttgattgaatgccttcaagggaaggtatcggcaaacaagggagaaattggtgatgctacg
ccttttaatgatgctgtcaatgtgcagaagatttccaatctattatcagattatggctat
catctgagaggaaatgaggttctctacaatggcttcactggacgcaaaatcacatcacaa
atcttcattggtcctacttactatcagaggttgaaacatatggtagatgacaaaattcat
tctcgtgcaagagggccaattcagattcttaacaggcaaccaatggaaggtagatctcgc
gatggtggccttcgttttggagaaatggagcgagactgtcagattgctcatggagcagct
cagtttttgagagagcgattgtttgaggcttcagacccataccaagttcatgtttgcaat
ctttgtggaataatggcaatagctaacacaaggacacacacgtacgagtgcagggggtgc
cgtaataaaacacagatttccttggtgcgaatgccatatgcctgtaaactcctctttcaa
gagctcatgtccatgagtattgcacctcgtatgatgagtatttag
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integrated database retrieval system
