Dermochelys coriacea (leatherback sea turtle): 119854985
Help
Entry
119854985 CDS
T09064
Symbol
SH3TC1
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcc04131
]
119854985 (SH3TC1)
Membrane trafficking [BR:
dcc04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
119854985 (SH3TC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_8
TPR_7
TPR_2
TPR_1
TPR_19
TPR_10
SH3_1
TPR_NPHP3
Csd3_N
SH3_2
ANAPC3
ARM_TT21
Motif
Other DBs
NCBI-GeneID:
119854985
NCBI-ProteinID:
XP_038256242
LinkDB
All DBs
Position
4:122497517..122561400
Genome browser
AA seq
1362 aa
AA seq
DB search
MELPAAAVECSVSVFGLHTLMEEEGFCSSAPYLERKQHSSCEGNKQQLGRSVSDCTYVAA
NTAISRSINMEEEVSLQGQMAMDFSQNNCLKASSRIPSSPAESFPTDISLKLIMVKRKSG
LHDPRLQGELRGRLRLLENDSREVMAVFSELSARLLSIHSDQDLIVVTFKTFEEIWKFLT
YYSLGFINHCMENLLLDQSFWLCSQEENEDKQEESGIEVYINEESLNLMYRGLLIQEGTF
FVLCPDNLIRETTAADMAVKVYQGNRRVTEDISGGSLGEDLTSVSKAAAETLIPFHQWFL
KVYADPVNFASKMESKCSKQIATGSSQAVISYASVVPEEISFQSGDKIEIIGYFIECLEW
FVGRHMLTGQIGFVKTSHVTPDTSGTEQQNLDFLDKEEKSFFAKERNVVEEDVVHLLTQT
SNTEVCTVYRVDGLEELEFQNPQEQEMPHTSSKTDSNRMREMVKESLMKCKDFQLQLKGA
SSQGNDFPSSSNQQTCAWAEEPRFCIQQDEEDQGSGVFQALLLFLNSKEYEMHFKNLYDF
SFPFLNTTFYGYIDEEELVDYFGLAREAAKKANLPWALTRLCFLLGRLCVRKLKFSQARV
YFEEALGAIRGGFSDLYLVVALYTNLTVIYLKQKNKGKCAQIFDKVTSLLMGIPNYICST
DMESDILRYGLKRTVLSQSKHAEARACFLLAKHYTKLKQYEEALPFLERLQLLNNDLDLQ
KSSLSADCYFQLGESYNQKCLPHIVLSCIKVASSQGSYTLMDSLRSIDLVTKNAPKLHRL
RKAGQMLPSQIAPYLRQALSSAFTNEQQKLCSTIYLSLSKLYSHHRRYGEAIVYMEKVLD
FNTSAHVEETINHLVSLAWLYILHRQNTVALAILNTIVDSSLSSPQQLGVIYNMTAIALK
RTNNIKQAAASYYKALHVSEEADIVHNHAVVLANFGTLCLHLAANCLAEHYYVKAVKLFS
GLPSLDGGHNFTQVLLQLGRYYANGTHKKRGRFYYEWALLVAMETNHLESQLQAVQLLCQ
FYTTVVPDEAQCVIYNEFQLSLARKMSDKVLEGQILETISQLYFSLGTERAYRSALEYTK
RSLGIFIDLQKKEKEAYAWLQAGKIYYILRQNELVDLYIQVAQDAALCNGDPNLGMELFE
AAGDIFFNGTWEKEKAVSFYRDRALPLAVKTGNKKAELRLCNKLVQLLLNLQDSEDSLEY
AQVSLTLSVKLGNQLNERIAYHRLATIHHRLGQCELAEHFYLKALSLCSSPLEFDEESMY
YVKVYLILGDIIFYDLKDPFDAAGYYHLALAAAMDLGNKKAQLKIYTRLAIIYHNFLMDR
EMSLFFYQRARTFATELNVRRINLAPDQYCKNATWVSVKNVM
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atggagctcccagcagcagcagtggaatgcagtgtttctgtttttggtctccacaccctg
atggaggaagaaggattctgcagctctgctccctatctggaaaggaaacaacatagctct
tgtgaaggaaataaacagcagctggggaggagtgtttcagattgtacgtatgtggcagct
aatactgccatttccagatcaattaacatggaagaggaggtctctttgcaaggacaaatg
gccatggacttttctcagaataactgcttgaaggccagttcaaggataccatccagtcca
gcagagagttttccaacagatatctccctgaagctaatcatggtaaaacgaaagagtgga
cttcatgacccccgactgcagggagaactgagaggacgactccgtcttctggagaatgac
agcagggaggtcatggcagtttttagtgagttgtctgcgagattgttgtctattcacagt
gaccaagacctaatagtggtgacatttaaaacatttgaagaaatatggaagtttttaacc
tactattcccttggttttataaatcactgcatggagaatttgttgctagatcagtctttc
tggctctgttcccaagaagagaatgaggataaacaagaagaatctggaattgaagtttat
ataaatgaagagtctctaaatttgatgtacagaggtctcttaatacaggaaggaactttc
tttgtattatgtcctgacaacctcataagagagacaacggctgcagacatggcagtgaaa
gtttatcaagggaacagaagagttactgaagacatttctggtggatcactgggtgaagac
ctgacctcagtgtctaaagctgctgcagagactttgatcccttttcatcaatggtttctt
aaagtatacgctgatcctgttaattttgctagcaaaatggagtctaaatgcagcaagcaa
atagctacgggatcttctcaagcagtgattagttatgcaagtgttgtgcctgaagaaatt
agcttccagagtggagacaaaattgaaatcattggctacttcatagaatgcctggagtgg
tttgttggaagacatatgttgacgggtcaaattggttttgtaaagaccagccacgttaca
cctgacacctctggaactgaacaacaaaatctggattttcttgataaggaagagaaatct
tttttcgcaaaagaaagaaatgttgtggaagaagatgtggtgcatttattgacgcagaca
tcaaatacagaagtttgcactgtgtatagagtagacggattagaagaattagaatttcag
aaccctcaagaacaagaaatgccacatacctcatctaaaacagactccaatagaatgagg
gagatggtaaaagaatcccttatgaaatgtaaagatttccaactccagttgaaaggggca
tctagtcaaggaaatgattttcctagctcttcaaatcagcagacctgtgcctgggctgaa
gagccacgtttctgcatacaacaagatgaagaagatcaagggtctggggtctttcaggca
ttattgttgttcttaaacagtaaagagtatgagatgcacttcaaaaacctgtacgacttc
tccttcccgtttcttaacaccacattttatggctacattgatgaagaagaactggttgac
tattttggactggcaagggaggcagcaaagaaagcaaatctgccttgggccctgacaagg
ctatgctttctcttgggtagactgtgtgttagaaagctcaaattttcccaagctcgcgtt
tattttgaagaagccttaggagctataagaggaggttttagtgacctgtatcttgtagtt
gctctttatacaaatctaacagtcatctatttgaaacagaagaacaaaggaaaatgtgct
cagatttttgacaaggttacttccctgctcatgggaattcccaactacatctgtagcact
gacatggagtcagacattctaaggtacggtttaaagagaacagtactcagtcagagcaag
catgccgaagccagagcatgcttcctcttggcaaaacattacacaaaacttaaacaatat
gaagaggcactaccattcctagaaaggctgcaacttttgaataatgacttggatttacag
aagagctcgctgtcagccgactgctattttcaactaggtgagtcctacaatcaaaaatgc
ttgccacacattgtgctaagttgcataaaggttgcttcttcccagggatcatatactcta
atggactctttgagaagcattgatttagtcaccaaaaatgctcccaaactccataggctg
aggaaagctgggcaaatgctcccatcccaaattgcaccttatctcagacaggcactttcc
tcagcatttaccaatgagcagcaaaaactatgtagcacaatttatcttagcttatccaaa
ctctacagtcatcacagacggtatggagaagccattgtttatatggagaaagtactggac
ttcaatacttctgcccacgtggaagaaactattaaccatttagtttcacttgcttggtta
tatattcttcacaggcaaaatactgttgctttggccatcctaaataccattgtagactct
tcactgagtagtcctcagcagttaggtgttatttataatatgactgccattgctttgaaa
cgaaccaacaacataaaacaagctgctgcgagttactacaaagctctgcacgtttcagaa
gaggctgatatcgtacacaaccatgctgtcgttctggctaattttggaactctctgcctg
catttagcagccaattgtttggcagagcactactatgtcaaagcagtaaagctattctct
ggacttccaagcttggatggtggtcacaattttactcaagtcctcctccaactgggacgc
tattatgctaatggaactcataagaaaagaggacgattttattatgaatgggcattattg
gtggcaatggaaacaaatcatttggaaagtcagctccaagctgttcagttgctgtgtcag
ttctacactacagttgttccagatgaagctcagtgtgtcatttacaatgaatttcaacta
tccttggctaggaaaatgtcagacaaagttttggaggggcaaattttggaaaccatcagt
cagctgtatttctctttaggcacagaaagggcttacagatcagctctggaatataccaaa
agaagccttggaatatttatagatcttcagaagaaagagaaagaggcatatgcctggctt
caggcaggaaagatctattacattttgaggcagaatgagctagtggatctttatattcag
gttgctcaagatgctgctctttgtaatggggatccaaacttaggaatggaattgtttgaa
gctgcaggagacatatttttcaatggtacctgggagaaggaaaaagcagtgtcattctac
agggacagggctcttccacttgccgttaagactggaaacaaaaaggcagaactccgatta
tgcaacaaactagtgcaattgctgttaaatctacaggattctgaggacagtctggaatat
gcacaagtatccctcacacttagtgtgaagttaggaaatcagctaaatgaacgaatagca
tatcacagactggctactatccatcatcgcctgggtcagtgcgaacttgctgaacacttt
tacttaaaagcgttgtccctttgctcctctcctctggaatttgatgaggaatcaatgtat
tatgtgaaagtgtatctaatcctaggagacattatattctatgacctaaaggatcctttt
gatgcagcaggatattatcatttggcacttgcagctgccatggacttgggcaacaaaaag
gctcagttgaagatttacacaaggctcgcaataatctaccacaattttcttatggatcgg
gagatgtctcttttcttctatcagagagcaagaacctttgcaacagagcttaatgttcgg
agaataaacctggcacctgatcagtattgtaagaatgcaacatgggtgtctgtgaaaaat
gtcatgtga
DBGET
integrated database retrieval system
