Dermochelys coriacea (leatherback sea turtle): 119855084
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Entry
119855084 CDS
T09064
Symbol
CNGA1
Name
(RefSeq) cGMP-gated cation channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
119855084 (CNGA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dcc04040
]
119855084 (CNGA1)
Ion channels [BR:
dcc04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
119855084 (CNGA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Zip
Ion_trans_2
DUF6474
DUF789
NPR3
Connexin
Sec62
DUF4746
RR_TM4-6
DDHD
Motif
Other DBs
NCBI-GeneID:
119855084
NCBI-ProteinID:
XP_038256459
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All DBs
Position
4:94698355..94717155
Genome browser
AA seq
730 aa
AA seq
DB search
MKVGVINTHRSYINVPKLAVQNADAGIGRMENRNRRSLAEEYDSSSILQTQEHGDSCPGY
SSTNNSQAVKGVLQRIPNFLVTLKDWKKRISDEGCQTSDSFLEKIQGPQLRWSKNFNNQN
LCGEISEEIMEHYLPSAIAQYNINNNSNKDEEKKKKEKKGKSDGKKEKKKDTEMQKNKEK
KEKHKNKDKHKKKDKKEEEKKDLFVIDPSGNLYYYWLFCITLPVMYNWTMIIARACFDEL
QNDHLGMWFIFDYISDIIYIADMFVRTRTGYLEQGLLVKEELKLKQKYTGTLQFKLDLLS
VIPTDLLYFKLGLTYPELRINRVLKVSRMFEFFQRTETRTNYPNIFRISTLVMYIVIIIH
WNACVYYSISKAIGFGADTWVYPNTSDPEFARLARKYVYSLYWSTLTLTTIGETPPPVKD
SEYFFVVVDFLVGVLIFATIVGNIGSMISNMNAARAEFQGRIDAIKQYMHFRNVNKEIEK
RVIKWFDYLWTNKKAVDEREVLKYLPDKLRAEIAISVHLDTLKKVRIFADCEAGLLVELV
LKLQPQVFSPGDYICRKGDIGREMYIIKEGKLAVVADDGITQFVVLSDGSYFGEISILNI
KGSKAGNRRTANIRSIGYSDLFCLSKDDLMEALIEYPDAKTLLEEKGKEILLKDGLLDIN
VANTGSDPKNIEEKVIQMEGAMDNLQTKLARLLAEYDATQQKLKKRLTEVEKILKSTMQF
EFSDLEELDK
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttggtgtgattaacacccatcgctcctatataaatgttcccaaactggcagta
cagaatgctgatgcgggcataggaaggatggagaatagaaacaggaggtctctggctgaa
gagtatgatagttcatccatattacaaacacaggagcatggggacagctgccccggttat
tcttccacaaacaactcacaggcagtgaaaggagtgctacagagaatacccaactttttg
gttactttaaaagactggaagaagaggatttccgatgaaggctgccaaacctcagactct
ttcttggaaaaaattcaaggtccacagctaagatggagcaagaattttaataatcagaat
ctctgtggtgagatatcagaagaaatcatggaacattacctacctagtgccattgcacag
tacaatatcaacaacaacagtaataaagatgaagagaaaaagaaaaaagaaaagaagggc
aagtctgatggtaaaaaagaaaagaaaaaggacacagaaatgcaaaagaacaaggaaaaa
aaggaaaaacacaaaaataaagataagcataagaagaaagacaagaaagaagaggagaag
aaagatctttttgttattgatccatcaggaaacttgtattactactggctgttttgcatc
acattacctgtcatgtacaactggactatgatcattgctagagcttgttttgatgaactt
cagaacgaccatttaggaatgtggttcatttttgattatatatcagatataatctatatt
gctgatatgtttgtacggacaagaacaggttacctggagcaaggtttgttggtgaaagaa
gaacttaaacttaaacagaaatatacaggaactttacaatttaaactagatctactgtca
gtcataccaactgatctactgtactttaaattaggtctgacctatccagaattaagaata
aacagagtacttaaagtatctcgtatgtttgagttcttccagcgaacagaaacaaggaca
aactatccaaatatcttcaggatctctactcttgtcatgtacatagtgattattattcac
tggaatgcatgtgtgtactattctatctccaaagccattggatttggggcagacacatgg
gtctatccaaacacctctgatcctgaatttgcccgtctggctagaaaatatgtatatagc
ctctactggtcgacgctgaccttgaccactattggggaaacacctcctcctgtaaaggat
tctgagtacttctttgtggttgttgacttcttggttggggtgttgatttttgctactatt
gttggtaacattggttctatgatctccaacatgaatgcagccagagcagagtttcaagga
aggattgatgctatcaagcagtatatgcactttcgaaatgtgaataaagaaatagaaaaa
agagttattaagtggttcgactacttgtggacaaataaaaaggcagtggatgaaagggaa
gttttaaaatatctaccagataaattaagagcagagattgcaatcagtgttcatctggac
acgttaaagaaagttcgaatttttgcagattgtgaagctggcttgttagttgaactagtc
ttgaaactgcagcctcaagtcttcagtccaggagattacatctgccgaaagggggacatt
ggacgagagatgtacattatcaaagaaggtaaacttgctgtagtagctgatgatggaatt
acacaatttgtggtcttaagtgatggcagctactttggggagattagcatacttaatatc
aaaggcagcaaagctggcaatcgaagaacagccaacattagaagcattggatactcagac
ttattttgtctatctaaagatgacctcatggaggctttaatagaatacccagatgcaaag
accctgctggaagagaaaggtaaggaaatcttgctgaaggatgggttactggatataaat
gttgcaaatacaggaagtgaccctaaaaacattgaagaaaaggtcattcaaatggaagga
gcaatggacaacttacaaaccaagcttgccaggcttttggctgagtatgacgccacacag
cagaaactgaaaaaacgactgacagaggttgagaaaatactgaaatcaactatgcagttt
gaattctcagatttagaagaattagataaataa
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