Dermochelys coriacea (leatherback sea turtle): 119855086
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Entry
119855086 CDS
T09064
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03030
DNA replication
dcc03410
Base excision repair
dcc03420
Nucleotide excision repair
dcc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119855086 (RFC1)
03410 Base excision repair
119855086 (RFC1)
03420 Nucleotide excision repair
119855086 (RFC1)
03430 Mismatch repair
119855086 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dcc03032
]
119855086 (RFC1)
03400 DNA repair and recombination proteins [BR:
dcc03400
]
119855086 (RFC1)
DNA replication proteins [BR:
dcc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
119855086 (RFC1)
DNA repair and recombination proteins [BR:
dcc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
119855086 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
AAA_14
BRCT_2
AAA_5
Rad17
RuvB_N
AAA_33
RNA_helicase
AAA_30
AAA_18
AAA_16
AAA_17
AAA_7
nSTAND3
Zeta_toxin
NTPase_1
AAA_19
Motif
Other DBs
NCBI-GeneID:
119855086
NCBI-ProteinID:
XP_043369879
LinkDB
All DBs
Position
4:100404035..100478627
Genome browser
AA seq
1098 aa
AA seq
DB search
MKMIPDKADKQEKKIDLDSDSEEETQSVKKSKKPPERKPSSLKPDKVLKQDPVYVSETDD
EGDFINKKTSQKPKENGTSASSCLGTTGARKEDAKSQAKSKPLSPIKLTPTSVLDYFGTS
SVHRSEKKLVASKRKEPSQSRDSLLEDEAIAKQLQLEEDSELERQLHEDEEFARTLAMLD
ETPKKKKARKDLEEKLTISTTKTSSNATEKHKLSQKGETSNSTDDTRNYSAKEQTKSEST
RPSCPHPETSVGKAVHSENKTLPLKPSSKLLALKQKEESNKKERETPSAVTKEKIISGKE
EKRTPKKRKVSPQKPESISPEDSEKKRVNYEAYRSFLNREGPKALGSKEIPQGAENCLEG
LTFVITGVLESIERDEAKSLIERYGGKVTGNVSKKTNYLIMGRDCGQSKCEKASTLGTKI
IHEDGLFDLIRTMPGKKSKYELAAEAEANKAKSKWVKTPQKTEPETRKISPAKKETDSKK
SNSTPEKGGTFRAIKKETTEAQKGLDFKQQTMEKKHAPKTEESCVPEISKGRAEGLLWVD
KYKPTSLKTVIGQQGNQSCANKLLRWLQNWHKNTSEEKHAKPNKMGGKDDGTNFKAALLS
GPPGVGKTTTAALVCEELGYSYVELNASDTRSKNSLKDVVAESLNNTSMKDFCSGTSHSV
SMKHVLIMDEVDGMAGNEDRGGIQELIGLIKTTKIPIICMCNDRNHPKIRSLVHYCFDLR
FQRPRLEQIKGAMMSIAFKEGLKIPAPAMNEIILAANQDIRQVLHNLSMWCTKNKSLTYD
EAKADASKAKKDIKLGPFDVVRKVFAAGEETAHMSLIDKSDLFFHDYSLAPLFVQENYVH
VKPVAARGNMIKHLMLLSRAADSICDGDLVDRQIRSKQNWNLLPTQAIYSSVLPGELMRG
YMSQFPNFPGWLGKFSSTGKHDRIVQELALHMSLRTHTSKRAVNLEYLSYLRDALVRPLT
SLGSEGVKDTVTFMDSYCLMREDVENIMEISSWGGKPSPFSKLDPKVKAAFTRTYNKEAH
LTPYALHAVKTSKRLPGPGLASEMNEELNADELQSDEDEQDTIESDAMIKQKKAKSSSKL
SKAANREETKKGKGKGKK
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgattccagacaaagcagacaaacaagaaaaaaagatagatctagattcagat
tcagaagaggagacgcagtcagtaaagaaatctaagaagccaccagagagaaaaccatcc
tctttaaaacctgataaagttcttaagcaggatcctgtttatgtttcagagacagatgac
gaaggtgacttcattaataagaagacttcccagaaacccaaggagaatggaacatcagca
agcagctgcctaggaacaacaggagcaagaaaggaggatgcaaaatcacaagctaaaagt
aaacctttatctccaataaaattgacgccaacctcagtactcgattactttggaactagt
agcgtgcatcgatcggaaaagaaattggtagcaagcaaaagaaaagaaccttcacaaagc
agagattcattgctagaagatgaggccattgctaagcaactgcagttagaggaagattca
gagctagagagacaattgcatgaggatgaagaatttgccagaactctggccatgttggat
gaaacaccaaagaaaaaaaaggctcgaaaagatctggaagagaagctaaccatttcgaca
accaagaccagttcaaatgcaacagaaaaacataaattgtctcaaaaaggggaaacatca
aactcaacagatgacacaagaaattatagtgcgaaggaacaaactaaatctgaaagtaca
agaccatcttgtccacatccagaaacttctgttggaaaagccgtgcactcagagaataag
accttgcctttgaaacctagctctaagctgctggctctgaaacaaaaagaagagagcaat
aaaaaggagagagagactcccagtgcagtgacaaaagaaaaaataatttcaggaaaggaa
gagaagagaacaccaaagaaacggaaagtttctccccaaaagcctgagtctattagtcct
gaggactctgaaaagaaacgagtcaactacgaggcatatcgaagcttccttaatcgagag
ggtccaaaagcactaggttccaaagagataccgcaaggagctgaaaactgcttggagggc
ctgacgttcgtaattacaggagtcctggagtctattgaacgagatgaggccaagtcttta
attgagcgttatggaggaaaagtgactggtaatgtgagcaagaagacaaactatctcatt
atggggcgtgactgtggccagtctaaatgtgagaaggcatcaacattagggacaaaaatt
attcatgaggatggcctatttgatctgattcgaactatgccaggcaaaaagtccaaatat
gaattagcagctgaagcagaggcaaataaagcaaagtcaaaatgggtcaagaccccacag
aaaacggagcctgaaacaagaaaaattagcccagctaagaaagaaactgactctaaaaaa
agcaactccactcctgaaaaaggaggcaccttcagagctataaaaaaagaaactactgaa
gctcagaaaggtctggacttcaagcagcaaactatggagaagaagcatgccccaaagact
gaagagagttgtgttcctgagataagcaaaggcagagcagaggggttgttgtgggttgat
aaatataagcccacatctcttaaaacagtaattggacagcaaggaaatcaaagctgtgcc
aataagttgttacgatggctccaaaactggcacaagaatacttctgaggaaaaacatgca
aaacccaataaaatgggaggcaaagatgatggtactaattttaaagcagctttgctgtca
ggtccaccaggagttggtaaaacgactacagctgctttagtttgtgaggaactggggtac
agctatgtggaactgaatgctagtgacactcgcagtaagaacagtttgaaggacgtggtt
gccgaatctttaaataacaccagcatgaaagacttctgttctggaacatcccattcagtt
agcatgaaacatgtattgatcatggatgaagtggatggaatggcagggaatgaagacaga
ggaggaatacaggagttaattggtctgatcaaaaccacaaagattcctatcatatgtatg
tgtaatgatcggaaccatcccaagattcgttccctggtccattactgttttgatcttcgc
tttcagagacctcggctagaacagattaagggtgccatgatgtctattgcatttaaagaa
gggttaaagatacccgctccagctatgaatgagataattctggcagcaaatcaggacatt
aggcaggttttacataatcttagtatgtggtgtacaaaaaataaatcactgacctatgat
gaggcaaaagctgatgccagcaaagccaaaaaggatatcaaactgggcccctttgatgtt
gtcaggaaggtttttgctgctggagaggaaactgctcacatgtctcttatagacaaatcc
gacctattcttccatgattactctctagcacctctttttgtccaagaaaactatgtacat
gtgaaacctgttgctgctcgaggtaacatgataaaacacttgatgctactgagcagagca
gcagacagtatatgtgatggtgatctagtcgacaggcagattcgcagtaagcaaaactgg
aaccttctgcctacgcaggccatttattcgagtgttctccctggggaactaatgagaggt
tacatgtcacagtttcctaactttccaggctggctggggaaattttcatccacaggcaaa
catgaccggattgttcaagaactggcactgcacatgagtctcagaacccacaccagcaag
agagccgtaaacctggaatatttgtcatacttgcgggatgcacttgttagacccttgaca
agcttaggatcagaaggtgtaaaggatactgtaacattcatggactcctattgcttgatg
agagaagatgttgaaaatattatggaaatatccagctggggaggcaaacctagtcccttt
tctaaactggaccccaaggtcaaagcagcttttacacgtacctataacaaagaggcacat
ttgacaccatatgccctgcatgcagtaaaaacatctaaacggctgccagggcccgggttg
gcttcagaaatgaatgaagaattgaatgctgacgaattgcagtctgatgaggatgagcaa
gatactattgaaagtgatgcaatgatcaagcaaaaaaaggcaaagtcgtcttccaagctg
tcaaaagcagcaaacagagaagaaacaaaaaaaggaaaagggaaaggaaagaaatga
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integrated database retrieval system
