Dermochelys coriacea (leatherback sea turtle): 119855210
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Entry
119855210 CDS
T09064
Symbol
SMARCA5
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119855210 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcc03021
]
119855210 (SMARCA5)
03036 Chromosome and associated proteins [BR:
dcc03036
]
119855210 (SMARCA5)
Transcription machinery [BR:
dcc03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
119855210 (SMARCA5)
Chromosome and associated proteins [BR:
dcc03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
119855210 (SMARCA5)
RSF complex
119855210 (SMARCA5)
WICH complex
119855210 (SMARCA5)
B-WICH complex
119855210 (SMARCA5)
NORC complex
119855210 (SMARCA5)
BRF complex
119855210 (SMARCA5)
NuRF complex (fruit fly)
119855210 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
SWI2_SNF2
AAA_14
Motif
Other DBs
NCBI-GeneID:
119855210
NCBI-ProteinID:
XP_038256795
LinkDB
All DBs
Position
4:55237812..55288814
Genome browser
AA seq
1040 aa
AA seq
DB search
MSAGQQEPPPDETLPLASTAPPAAANNGSEAAGAPPPAAGDADMEEVFDDASPGKQKEIQ
EPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQN
LLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISL
YENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPT
LRAVCLIGDKDQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIK
NEKSKLSEIVREFKTTNRLLLTGTPLQNNXHELWGTLLNFLLPYVFNSADDFDSWFDTNN
CLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDID
ILNSAGKLDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLP
KLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPDSSKF
VFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTV
EERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATHVFASKESEITDDD
IDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYREKQKMAFTEWIEP
PKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYR
KTIGYKVPRNPDLPNAAQAQKEEQLKIDEADPLNDEELEEKEKLLTQGFTNWNKRDFNQF
IKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQR
RISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDEL
RQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEKAEKKKRGPKPSSA
QKRKMDGAPDGRGRKKKLKL
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgggcagcaggagccgccgcccgatgagaccctgcccctcgccagcaccgcg
ccccccgcagccgctaacaacggcagcgaggccgcgggggcaccaccccccgccgcgggc
gacgctgacatggaggaagtttttgatgatgcatcaccaggaaaacaaaaagaaatccag
gaaccagatcctacatatgaagagaaaatgcaaacagacagagcaaacagatttgagtat
ctgttaaagcagactgagctgtttgctcatttcattcagcctgctgctcaaaagactcca
acttcacctttgaaaatgaaaccaggacgtccacgaataaaaaaggatgagaaacagaac
ctgctgtcagttggcgactatcgacatcgtagaacagaacaggaagaagatgaggagcta
ttgacagaaagctccaaggcaactaatgtatgcactcgatttgaagattctccatcatat
gtaaaatggggtaaactgcgcgattatcaggtccgaggattgaactggctcatctctttg
tatgagaatggcatcaatggtatcctggcagatgaaatgggtcttggaaagacactgcaa
acgatttctcttcttgggtacatgaaacactacagaaatattcctggccctcacatggta
ttagttcccaaatccactttacacaactggatgaatgagttcaagagatgggtaccaaca
cttcgagcagtttgtttgataggtgacaaagaccaaagagctgcctttgtccgagatgta
ttgttgccaggagaatgggatgtctgtgtaacatcatatgaaatgcttattaaagagaaa
tctgtgttcaaaaaatttaactggagatatctagttatagatgaagcccacaggatcaaa
aatgaaaaatccaagttgtcagaaattgtgagggaattcaagacgacaaatcggctgctg
ttaactggaactccacttcagaacaatntgcatgaactctggggcacacttctcaacttt
cttttgccatatgtctttaactcagctgatgacttcgattcatggtttgatacaaataac
tgtcttggagatcaaaagctggtggaacgtctccacatggtgctaaggccattcctccta
cgccgtattaaagctgatgtagaaaagagtttgcctccaaagaaggaagttaaaatttat
gtgggtctaagcaaaatgcaaagagaatggtatacacgaatcttaatgaaggatatagat
atattgaactctgctgggaagttggacaaaatgagactgttgaacatcctgatgcaattg
cgaaaatgttgcaatcatccttacctcttcgatggagcagaacctggtccaccttacaca
acagatatgcatttggttaccaacagtggcaaaatggtggtattggacaaactgctacca
aagttgaaagaacaaggctcacgagtattgatctttagtcagatgacaagagtactagac
attttggaagattactgcatgtggcgaaattatgagtattgtagattggatggacaaaca
cctcatgatgagagacaagattctattaatgcatataatgaacctgacagctccaagttt
gtgtttatgttgagcacgcgtgccggtggtcttggaatcaatctggctaccgctgatgtt
gtaattctttatgattcagactggaatccacaagtagatcttcaagctatggaccgagca
cacagaattggccagacaaaaactgttagagtgttcagatttatcacagacaacaccgtg
gaggaaagaatagtggaaagagcagaaatgaaacttcgtttggattccatagtcattcaa
caaggaagattggtggatcaaaatctgaataaaataggaaaagatgaaatgctgcagatg
attcgacatggagctacacatgtgtttgcctcaaaggagagtgagattactgatgatgat
attgatggtattttggaaagaggtgcaaagaagactgcagaaatgaatgagaaactctca
aagatgggcgaaagttcacttagaaattttacaatggatacagagtccagtgtatacaac
tttgaaggggaagattatagagagaaacaaaagatggcattcacagagtggattgagcca
cctaaacgagaaagaaaagccaactatgctgttgatgcttacttcagggaagctcttcgt
gtcagtgaaccaaaagcaccgaaagctccacgacctccgaaacaacctaatgttcaagat
ttccagttctttcctccacgtttgtttgaactactagaaaaagagattctgtattacaga
aaaactattgggtacaaggtacctcgtaatccagacttgccaaatgcagcccaagcacaa
aaggaagaacagcttaaaattgatgaagctgatccccttaatgatgaagagttagaagaa
aaggagaaactactaacacagggatttaccaactggaataaaagagattttaaccagttc
atcaaagctaatgaaaaatggggccgtgatgatattgaaaatatagctcgtgaagttgaa
ggaaaaaccccagaggaagtcattgagtattcagctgtgttctgggaaagatgcaatgaa
ctccaggacatagagaagatcatggctcagattgaaagaggagaagctagaattcagagg
cggattagtataaaaaaagcacttgacacaaagattggcagatataaagcacctttccac
cagttgagaatatcatatggtactaacaaagggaagaattacacagaggaggaggatcgc
tttctaatctgtatgcttcacaagctaggatttgataaagaaaatgtttatgatgaatta
agacagtgtattcgaaactctccccagttcagatttgactggttcctgaagtccagaact
gcaatggagctacagaggagatgcaataccttaatcactttgattgaaagagaaaacatg
gaattggaagaaaaggagaaggcagagaagaagaaacgtggaccaaagccttcttcagca
cagaagcgtaaaatggacggtgctcctgatggtcgaggcaggaaaaagaagttaaagctg
tga
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integrated database retrieval system
