KEGG   Dermochelys coriacea (leatherback sea turtle): 119855397
Entry
119855397         CDS       T09064                                 
Symbol
UBAP2
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin-associated protein 2
  KO
K26545  ubiquitin-associated protein 2
Organism
dcc  Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:dcc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dcc04121]
    119855397 (UBAP2)
   03400 DNA repair and recombination proteins [BR:dcc03400]
    119855397 (UBAP2)
Ubiquitin system [BR:dcc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    119855397 (UBAP2)
DNA repair and recombination proteins [BR:dcc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     119855397 (UBAP2)
SSDB
Motif
Pfam: UBAP2-Lig UBA_4 UBA_RAD5A GIP1_N UBA DUF1510 CUE API5
Other DBs
NCBI-GeneID: 119855397
NCBI-ProteinID: XP_038257161
LinkDB
Position
5:5215089..5314316
AA seq 1135 aa
MMTSVGSERTRGTRDKTQISTTQPAQPQKQVVQATAEQIRLAQMIYDKNDADFEDKVKQL
MEVTGKNQDECIVALHDCNGDVNRAINILLEGSSDTTSWETVGGKKKSLGKESSENKENR
EKRGDREVSRGRGSSNRRGRGGNRGREFRVEENGVENSQGERPSDRGKRGRGRGFGRGRG
RGAGRFSAQGMGTFNPADYTETSATDGFGPKPEVWETGQNDVDDGTEPAQSGHYLAQDLP
NNCGLQGAWKNSIEEWTAEDWNEDLSETKVFTASSVPAENHITPGQSIDLVTLLQKPVTS
SQETEGNSFESPQQQSFGQALVFTNSQHNTQMTSGTGNSSSLNSYSPQSLSSVLCSGFGE
LGSSKLANSTGSPLLDQLKSPGLGQFTSQQNSSSSTATTATTTSSWDLKPPISQSSVLSQ
FDFKSQPEPSPVLSQLTQRQQQQTQTVPVPPPGLESFSSQVKLREPSPVDSSTAASKMLQ
LPSMSMDNQAVSAHQTQQKQIKPPKRRIPPASKIPASAVEMPGSADVTGLNVQFGALEFG
SEPSLPEFGLAPSNENISQVPSNSLYSKPVNDPLNTSLPISNTVQESTYTTSAITSSSLT
CSSQSTSPVTTTSSYDQTSVHSRIAYQSSMAPSDSTPVAVTNGHSGVRTQPTLDTTSSVP
TSKTETSPSLPTAGSLPSTASSTASLLPSAPQHTAALPSLPQSSDLASSSLSQLSSSLSN
HQSSLSSAAALSASTSHAHTSVESTASLQPSTTFSTASTSATSTTSSVVSMASSMNTTNS
LGLSVTSVSMPAASTRAAPLVSSGKAPPNLPQGVPPLLHNQYIVGPGGLLPAYPIYGYDD
LQMLQSRLPMDYYGITFPAPATLTGRDGSLANNPYSGDVTKFGRGDSASPAPATTLAQPQ
QNQTQTHHATQQPFLNPTLPPGYSYTGLPYYAGVPGVPSAFQYGPTMFVPPASAKQHGVN
LNTASTPFQQASGYGQHGYGAGYDDLTQGTAAGDYSKGGYSGSSQAQNKSAGTGPGKGVS
VTSSNTGVPDXSGSVYNKTQTFDKQGFHAGTPPPFSLPSALGSTGPLNPGAAPGYAPAPF
LHILPAHQQPHSQMLHHHLQQDGQGGSGQRNQPSTMQQKSQATKTAYGTSPYWTN
NT seq 3408 nt   +upstreamnt  +downstreamnt
atgatgacttcggtgggcagtgaacgtacccggggcactcgggacaaaacacagatttca
accacgcagccagcacagccacagaaacaagtcgtacaggcaacagcagaacagattcgc
ctcgcacagatgatctatgataagaatgatgcagattttgaagataaagtgaaacaactc
atggaagtgacggggaagaaccaggatgaatgcatagtggcgctacatgattgtaatggg
gatgtgaatagagcaatcaacatactgctggaaggaagctcagacacaacttcatgggag
actgtagggggaaagaagaaaagccttggaaaagagagttcagaaaacaaagagaacaga
gaaaagcgaggggacagggaagtgagccgtggacggggaagctccaacagacggggaaga
ggaggcaaccgtggccgagagtttcgagtagaagagaatggtgtggaaaacagtcaaggg
gagaggccttcagaccgtgggaaacgtggccgtgggagagggtttggacgtggtagaggg
cgaggagctgggagattttcagcccaaggcatggggacatttaacccggcagactacacg
gagacttctgccacagatggatttgggccaaaaccagaggtttgggagactggtcagaat
gatgtagatgatggaactgagccagcccagagtggacattatcttgctcaggacctgcca
aataattgtggactccaaggagcatggaagaattcaatagaagaatggacggcagaagac
tggaatgaagatctttctgaaacaaaggtcttcactgcatcttctgttccagctgagaat
cacatcactcctgggcaaagcattgacctagtaacattacttcagaagcctgtgacttct
agccaagaaacagaaggcaactccttcgagtctccccaacagcagagctttggccaagcc
ctagtcttcacaaattcccagcacaacacccagatgacatcaggaactggcaattccagt
tctctaaactcctattctcctcagagtctgtcttcagttctctgttctgggttcggagaa
cttggatcctctaaattagcaaactccactggctctccgctcttggaccagttgaagtct
ccaggtttgggtcaattcacctctcagcaaaacagcagtagttccactgccaccaccgct
accaccacctcatcctgggatctaaaaccccctattagccaatcctcggtcctcagtcag
tttgactttaaatcccagcctgaaccatctccagttctcagccagctgacccagcgacag
caacagcagacacagacagtccctgttcctcctcctggattggagtccttctcctcccaa
gtaaaactccgagagccatcaccagtagacagttctacagctgcaagcaaaatgctgcag
ctccccagcatgtctatggataaccaggcagtgtctgcccatcaaacgcagcagaaacag
atcaaaccaccaaaacggaggatacccccagcttctaagatcccagcctctgcagtggaa
atgcctggatcagccgatgtgacagggttaaacgttcagtttggagctctggagttcggg
tcagagccttctctcccagagtttggattagccccaagcaatgagaatatcagccaggtg
cccagcaacagcttgtactcaaaacctgtaaatgatcctttgaatacctctttgccaata
tccaatacagtacaggagtccacctacacaacctctgccatcacttcttccagtctgacc
tgctcatcccagagcactagccccgtaacaactacttcctcctatgaccagacttctgtg
catagcaggatagcataccaaagctccatggctccatcggactcaacccctgttgcagtc
acgaatgggcacagtggtgttcgaacacagccaactcttgacactacttcatcagttcca
acgtctaagacagaaacctctccctcgcttcctactgcggggtctctgcctagcacggcg
tcctccactgcttcgcttctgccttcagctccacagcacacagcagcgttacccagcttg
ccccagtccagtgacttggccagcagctcactctcccagttaagcagttccctctccaat
catcagagcagcctctcctctgctgcagcgctgtctgcgagcacctcacatgcgcacacc
agtgttgagagcacagcttcactccagccctcaacaaccttttcaactgcttcaacctca
gccactagcaccacatcttcagtggtcagcatggcaagcagtatgaacactacaaacagc
cttggcctgagcgttaccagtgtgtctatgccagctgcttctacacgggcagctccctta
gtgtcttcaggcaaagctccccccaacctgccccaaggtgtaccacccttgttgcataac
cagtatattgtgggacctggaggactcctgcctgcctacccaatctacggttatgacgat
cttcagatgctccaatccaggctgccaatggattattatggaattacattccctgctcct
gcaaccttgacaggcagagatgggagccttgctaacaacccatactcaggtgatgtaaca
aaatttggccgcggggattctgcctcccctgctcctgccaccaccttggcccagccacag
cagaatcagacgcagactcaccacgccactcagcagcccttcctaaaccctacgctgccc
ccaggatacagctacacggggttaccatattacgccggcgtgccaggagtacccagtgca
ttccagtatgggcccaccatgtttgtacctccagcatcagccaagcagcatggtgtcaat
ttgaacaccgcttccaccccgtttcagcaggcaagtggttatggacaacatggttatgga
gcaggctatgatgacttaacgcagggaacggcggctggagactacagcaaaggaggctac
agtggatcatctcaagcacaaaacaaatctgctggcactggacctgggaaaggtgtttct
gtgacctcaagtaacacaggtgtgcctgatnncagtggctcagtctataacaagactcag
acgtttgacaagcagggattccatgctggcacaccgcctcctttcagcctgccatctgct
cttggatccactgggccattgaaccctggtgctgccccaggttatgctccagcccctttc
ctgcatatcctgcctgcacatcagcagcctcattcccagatgctgcatcaccaccttcag
caagatgggcagggtggatctggccagcgcaatcagccaagcaccatgcagcaaaagtct
caggctaccaaaaccgcctatggcacttctccatactggacaaactaa

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