Dermochelys coriacea (leatherback sea turtle): 119855617
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Entry
119855617 CDS
T09064
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcc03021
]
119855617 (CHD1)
03036 Chromosome and associated proteins [BR:
dcc03036
]
119855617 (CHD1)
Transcription machinery [BR:
dcc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
119855617 (CHD1)
Chromosome and associated proteins [BR:
dcc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
119855617 (CHD1)
SLIK complex
119855617 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Chromo
Helicase_C
Motif
Other DBs
NCBI-GeneID:
119855617
NCBI-ProteinID:
XP_038257920
LinkDB
All DBs
Position
5:complement(64229200..64312071)
Genome browser
AA seq
1805 aa
AA seq
DB search
MNGHSDEESIRSSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGS
QSESESDTSREKKQVQAKPPKVGGAEFWKSNPSILAVQRSAMLRKQHQHQQKAASSNSGS
EEDSSSSADTLDDSSSETKRKKHKDEDWQMSGSGSVSGTGTDSESEEDREKSSCEESESD
YEPKNKVKSRKPPSRIKPKSGKKSAGQKKRQLDSSDEDDDYDKRGSRRQATVNISYKEAE
ETKTDSDDLLEVCGEDVPQPEEDEFETIEKFMDSRFGRKGATGATTTIYAVEADGDPNAG
FDKSKEPGETQYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETKRWLKNA
SPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDG
ALIAKKFQSCIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHEGLELRDYQL
NGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQ
REIQTWAPQMNAVVYLGDINSRNMIRTHEWMHPQSKRLKFNILLTTYEILLKDKSFLGGL
NWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFS
SWEDFEEEHGKGREFGYASLHRELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYY
KWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQHLIRS
SGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQA
LDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQ
VNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKEELS
AILKFGAEELFKEPEGEEQEPLEMDIDEILKRAETRENEPGPLTVGDELLSQFKVANFSN
MDEDDIGLEPERNSRNWEEIIPELHRRRLEEEERQKELEEIYMLPRMRNCAKQISFNGSE
GRRSRNRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLE
RLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDNSSGQERAGGRLGKVKGPTFRISG
VQVNAKLVISHEEELAPLHKSIPSDPEERKRYAIPCHTKAAHFDIDWGKEDDSNLLIGIY
EYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLNKDLARKEAQRLS
GAGNSKRRKTRAKKNKVVKLAKVKEEIKSDSSPLLSEKSDEEEEEDNKDEIASVKHPNKK
IKAEKENDEKSEPDFGIKKEVEEKRETKEKENKRELKREKKEKEDKKELKEKDMKEKRES
KVKESTQKEKEAKEEKINEVKSDNKDKTKKATSADTPVHITAISDPVPISEESEELDQKT
FSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQ
WRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQHNDQNISSNVNTHVIRNPDVERLK
DNTNHDDSSRDSYSSDRHLSQYHDHHKDRHQGDAYKKSDCRKRPYSAFSNGKDHRDWDHY
KQDSRYYSDSKHRKLDDHRSRDHRSSLEGNLKDSRSHSDHRSHSDHRIHSDHRSSSDYSH
HKSSRDYRYHSDWQMDHRASSSGPRSPLDQRSPYGSRSPLGHRSPFEHSADHKSTPEHTW
SSRKT
NT seq
5418 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggcacagtgatgaggaaagcataagaagcagtagtggagaatcaagccagtcg
gatgacgattctggttcagcatcaggttctggatctggttcaagttctggaagcagtagc
gatggaagtagcagccagtctggtagcagtgactctgactctggttcagagtcgggcagt
cagtcagaatcagagtctgacacatctagagagaagaaacaagttcaagcaaaaccacca
aaagttggtggagctgagttttggaaatcaaatccaagtattttggctgtacagagatca
gcaatgctcaggaagcagcatcagcatcagcagaaagcagcttcatcaaacagtgggtca
gaagaggattcctctagtagtgcagacactttggatgactcatccagtgagaccaagagg
aaaaaacataaagatgaagactggcaaatgtctggatcaggatctgtctctgggactggt
acagattctgaatcggaggaggatagagagaaaagcagttgtgaggagagtgaatctgac
tatgagccaaaaaataaagtgaaaagcaggaaacctccaagcagaattaagccaaaaagt
gggaaaaagagtgcaggacagaaaaagaggcaacttgattcatccgatgaggatgatgat
tatgataaaagagggtctcgtcgccaggcaacagtcaatattagttacaaagaagctgaa
gaaacaaagacagactcggatgacttgctggaagtctgtggagaggatgtcccacaaccc
gaagaagatgaatttgaaactatagaaaagtttatggatagccgttttggacgaaaagga
gccactggtgctacaaccaccatctatgcagttgaggcagacggtgatccaaatgcaggg
tttgataaatcgaaggagccaggagaaacacagtatctaattaaatggaaaggctggtct
catatccataacacatgggagactgaagaaaccttgaagcagcagaatgttaaaggaatg
aagaaactggacaactacaagaaaaaggatcaggaaacaaaacgatggctgaaaaatgct
tctccagaagatgtggaatattataactgccagcaagaacttacagatgatcttcataaa
caatatcaaatagtggagagaataattgctcattcaaatcagaagtcagcagcaggttat
ccagattattattgcaagtggcagggtctcccttactcagagtgcagctgggaagatggt
gctctcattgccaaaaaatttcagtcatgcattgatgagtattttagcagaaatcaatcc
aagacgactccttttaaggactgcaaggttttaaaacagaggccaaggtttgttgcactg
aagaagcaaccatcatatattggtgggcatgaaggcttagagttaagagactatcagtta
aatggactaaactggctcgctcactcctggtgcaaagggaacagttgtattcttgcagat
gaaatgggtttgggtaaaacaatacaaactatttcttttctgaactacctgtttcatgaa
catcagttgtatgggcctttcttgctggtagtgccactttctactttgacatcttggcaa
agagaaattcagacgtgggctcctcagatgaacgctgtggtttatttaggagacatcaat
agcagaaacatgataagaactcacgaatggatgcatccacagtccaaacggttaaaattt
aatattcttttgacaacttatgaaattttgctaaaggataagtctttccttggtggtcta
aattgggcatttataggagtggatgaagctcatcgtttaaaaaatgatgattcccttcta
tacaagacactaatagactttaagtcaaaccatcgtcttcttatcactggaactcctctg
caaaactccctcaaagagctctggtctttgctgcacttcatcatgccagaaaagttttct
tcctgggaagattttgaagaggagcatggcaaagggagagaatttggctatgcaagtctt
cacagagaacttgagccatttctgttacggagggttaagaaagatgtagaaaaatctcta
cctgccaaggttgaacagattttgagaatggagatgagtgcattgcagaagcaatattac
aagtggattttaaccaggaattacaaagccctgagtaaaggttcaaagggcagtacctca
ggctttttgaacatcatgatggaactcaagaagtgttgtaaccattgctacctcattaaa
ccaccagatgataatgaattctataataaacaagaggccttacagcatttaatccgtagc
agcgggaaactaatccttcttgacaagctactgattcgcttaagggagcgtggcaacaga
gttcttattttctctcagatggtgaggatgctggacatcctagcagaatatttgaagtat
cgtcaattcccctttcagagactagatggctcaataaaaggggaattgaggaagcaagca
ctggatcattttaacgcagaaggatcagaggatttctgctttttactgtctacgagagct
ggagggctaggtataaacttggcatctgctgacaccgtagttatatttgattctgactgg
aacccacaaaatgatctgcaggcacaggctagagctcataggattggccaaaagaaacag
gttaatatttatcggctagtcacaaagggatcagtagaggaagatattcttgaaagagcc
aagaagaagatggtgttagatcatttagtaattcagagaatggacactacagggaagact
gtactccacacaggttccgctccttcaagctctactccttttaataaggaagagttgtca
gcaattttaaagtttggtgctgaggaactttttaaggaacctgaaggagaagagcaggag
ccactggaaatggatatagatgaaatcttaaagagggctgaaacacgggaaaatgagcca
ggcccattaaccgtaggagatgagttgctttcccagtttaaggtggccaatttttccaat
atggatgaagatgacattgggttggagcctgaacgaaattcaaggaactgggaagaaatc
attccagagctccacaggcgaagattagaagaggaggaaagacagaaggagcttgaagaa
atttatatgcttccaagaatgcgaaactgtgcaaaacagatcagcttcaatggaagtgaa
gggaggcgtagtaggaacagaagatactctggttctgatagtgattctatctctgaaaga
aaacgacccaaaaaacgaggaagaccacgcactattccacgagagaatattaaaggattt
agtgatgcagagattaggcggtttatcaagagttacaagaaatttggtggccctctggaa
aggctagatgctatagctagagatgctgaattagttgataaatctgagacagaccttagg
cgcttgggggaactggtacacaatggatgcattaaggctttaaaggacaattcctctgga
caagaaagagcagggggcagacttggaaaagttaaaggcccaacattccgaatatcagga
gtacaagtgaatgcaaagctagtcatctctcatgaggaagagttggcaccattgcacaag
tctattccttcagatccagaagaaaggaaacgatatgccattccgtgccacactaaggca
gctcattttgatattgattggggcaaagaggatgactccaatcttttaataggcatctat
gaatatgggtatggtagttgggaaatgataaaaatggatcctgacctcagcttgacacac
aagattctaccggatgatccagataagaaaccccaggccaagcagttgcagacccgagca
gactacctcattaaattactcaataaagatcttgcaaggaaggaagcgcaaagactttct
ggtgcaggaaactcaaagaggaggaagacaagagctaagaagaataaagtggtaaaactt
gcaaaagttaaagaggagataaaaagtgattcttctccactgctctcagaaaaatctgat
gaagaagaagaggaggataacaaggatgagatcgcttcagtcaaacatccaaataaaaaa
ataaaagcagaaaaagaaaatgatgaaaaatctgaaccagattttggtataaagaaggag
gtagaagaaaagagagaaacaaaagaaaaggaaaataagagggagctgaaaagggagaaa
aaagaaaaagaggataagaaagaattaaaggaaaaagatatgaaagaaaagagagaaagc
aaagtaaaggagtccacacagaaagaaaaagaagcaaaggaagagaagataaatgaagtc
aaatctgacaacaaagacaaaactaagaaagctacatcagcagatactccagttcatatt
actgcaattagtgacccagttcctatatctgaagaatctgaagagctggatcagaagaca
ttcagtgtatgcaaagaaagaatgaggcctgtcaaagcagcgctgaaacagctggataga
ccagaaaaaggtctttcagaaagggaacagctggagcatactagacagtgtctgatcaaa
attggggatcacatcactgaatgtctaaaagagtacacaaatccggaacaaattaagcag
tggaggaaaaatttgtggatttttgtgtcaaagtttacagaatttgatgccagaaagctg
cacaaactatataaacacgcaatcaaaaaacgccaggaatctcagcaacacaatgaccag
aacatcagcagcaatgtgaacacacatgtgattagaaatccagatgtggaaagactgaaa
gataatacaaaccatgatgacagtagcagggacagttattcctctgacagacatttgtca
caataccatgatcatcacaaagacagacatcagggagatgcttacaaaaaaagtgactgt
aggaaaaggccctattctgccttcagcaatggaaaagatcacagggattgggatcactac
aaacaggacagcagatactacagtgatagtaaacatagaaagctggatgaccacaggagt
agagatcacaggtcaagcctggaaggaaatttaaaagacagtcggtctcattcagaccac
cgttcccattcagaccaccggatacactcagatcaccgatccagttcagactacagccat
cataaatcttccagggactatagataccactcagactggcaaatggaccatagagcttcc
agtagtggcccaaggtcaccactagatcagaggtctccttatggctcaaggtctccctta
ggacacagatctccctttgaacactcagcagatcacaaaagtacacctgaacatacatgg
agtagccggaaaacataa
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integrated database retrieval system
