Dermochelys coriacea (leatherback sea turtle): 119855656
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Entry
119855656 CDS
T09064
Symbol
THBS4
Name
(RefSeq) thrombospondin-4
KO
K04659
thrombospondin 2/3/4/5
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc04145
Phagosome
dcc04510
Focal adhesion
dcc04512
ECM-receptor interaction
dcc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119855656 (THBS4)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119855656 (THBS4)
09144 Cellular community - eukaryotes
04510 Focal adhesion
119855656 (THBS4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119855656 (THBS4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcc04131
]
119855656 (THBS4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dcc04147
]
119855656 (THBS4)
00536 Glycosaminoglycan binding proteins [BR:
dcc00536
]
119855656 (THBS4)
Membrane trafficking [BR:
dcc04131
]
Endocytosis
Phagocytosis
Opsonins
119855656 (THBS4)
Exosome [BR:
dcc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119855656 (THBS4)
Exosomal proteins of colorectal cancer cells
119855656 (THBS4)
Exosomal proteins of bladder cancer cells
119855656 (THBS4)
Glycosaminoglycan binding proteins [BR:
dcc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119855656 (THBS4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_3
EGF_CA
EGF
cEGF
DUF7630
Motif
Other DBs
NCBI-GeneID:
119855656
NCBI-ProteinID:
XP_038258052
LinkDB
All DBs
Position
5:complement(45062652..45122726)
Genome browser
AA seq
958 aa
AA seq
DB search
MMSKRQVTVLLLQVLLQLGPGSGAQPAPQVFDLLSSPSQRLVYFLQQALADHTLNEVYVL
STFKLQTKSSATVFGLYSSDDNSKYFEFTVVGRLNKVILRYLKNDGKLNSVMFSNTQLAD
GKHHTVLLRLSGLQRGSITAELYLDCMQVDAIQGLPKAFSGLYHSSESVKIRTLPKKAQD
TLDELKLVVKGSLSQVASLQDCFLQQIEPAAQNTDDFNRQFMGHMMQMNQILGDVKDLLR
QQIKETTFLRNTIAECQACGLGATNFPTLPPVTPKPKCKANSCSSGVRCTEIADGFQCGP
CPEGFTGNGVTCSDIDECRYSPCFPGVHCVNIVPGFRCEACPPGYTGQTVQGIGINTAKN
NKQVCLDIDECNNGQNGGCIPNSQCINTMGSYHCGPCKPGYTGDQVKGCKAKNSCRNRAL
NPCSVHARCIEERQGEISCTCGIGWAGDGYICGKDIDIDGYPDEKLSCSADSCRKDNCRF
VPNSGQEDADGDGLGDACDEDADGDGIPNEQDNCVLVPNIKQRNSDQDIFGDACDNCRTV
LNNDQRDTDGDGKGDACDDDMDGDGIKNLLDNCQRVPNRDQKDGDNDGVGDACDSCPTIS
NPNQSDIDNDLIGDSCDTNQDSDGDGHQDSTDNCPTVINSSQLDTDKDGLGDECDDDDDN
DGIPDLMPPGPDNCRLVPNPGQEDDNRDGVGDICESDFDQDTVIDQIDICPENAEITLTD
FRAYQTVVLDPEGDAQIDPNWMILNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNT
VTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGIQLKAVKSKTGPGEHL
RNSLWHTGDTNDQVRLLWKDPRNVGWKDKVSYRWFLQHRPHVGYIRARFYEGSQLVADSG
VTVDTTMRGGRLGVFCFSQENIIWSNLKYRCNDTIPEDFQEFQAQQLGVGDILTQKAN
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcaagcgccaagtcaccgtcctgctcttgcaagttctcctgcagctcggcccg
ggctctggcgcccagcctgccccgcaagtttttgatcttctttcatctcccagccagagg
ctggtatactttctacaacaagcgcttgctgatcatacattgaatgaagtatatgtgctc
tcaacgttcaaattgcagacaaagagttcagccaccgtatttggcttgtattcttcagat
gacaacagcaaatattttgaatttacagtggtggggcgattgaataaagtcatcctgcgt
tacttgaagaatgatgggaagttaaactctgtgatgttcagcaacacccagctggctgat
gggaagcaccatacagtccttttgaggctgagtggtctgcagcggggatccatcacagca
gagttatatctggactgcatgcaggtggatgccattcaaggtctacctaaagcgttttca
ggtctataccacagctcagagtctgtgaaaattcgcaccctacctaaaaaggcacaggac
actttggatgagctgaagctggtagtgaaaggctcactttcccaagtagcaagtctgcaa
gattgcttccttcagcagattgaacctgctgctcagaacacagatgattttaataggcaa
ttcatgggtcacatgatgcaaatgaaccaaatactaggagatgtgaaagaccttctcaga
cagcagatcaaggaaacaacttttttgagaaatactatagcagaatgccaggcatgtggt
ttgggagctacaaactttccaactctgcccccagtgacccctaaacccaaatgcaaagcc
aactcctgttccagcggggtcaggtgcacagagatagcagatggatttcagtgtgggccc
tgtcccgaaggattcacaggaaatggagttacatgctcagatatcgatgagtgccgctat
agcccatgcttccctggggtgcactgtgtgaacattgttccaggcttcagatgtgaggct
tgccccccaggatacacaggacagacagttcaggggatagggatcaatactgccaagaac
aataagcaggtctgcttggatattgatgaatgtaataatggccaaaatggagggtgcatt
ccaaattcccagtgcataaacaccatgggttcttaccactgtggcccatgcaaacccggt
tatactggagaccaggtcaaaggatgcaaggctaagaacagctgcagaaatcgagccttg
aacccatgcagtgtccatgcacggtgtattgaagagaggcaaggagagatttcatgtact
tgtggcattggttgggctggtgatggttatatctgtggaaaggacatagatattgatggc
tatcctgatgaaaaactctcatgctctgctgatagctgcagaaaggacaactgcagattt
gttccaaactcaggacaagaagatgcagatggtgatggactcggagatgcctgtgatgag
gatgcagatggagatggaattcctaatgaacaggataactgtgtattggtgccaaacatt
aagcagaggaacagtgatcaagatatctttggagatgcttgtgacaactgtcgcacagtc
ttgaataatgaccagagggacacagatggtgacgggaaaggagacgcctgtgatgatgac
atggatggagatggtattaagaatcttttggacaattgtcagagggttcccaatcgggac
caaaaggacggggataacgatggtgttggtgacgcttgtgacagctgccccactatcagc
aaccccaaccagtcagatatcgacaatgacctgattggagattcttgtgacaccaaccaa
gacagtgacggagatggacaccaggacagcacagacaactgtcccacagtcattaatagc
tcccagctggacactgataaggatgggctgggtgacgagtgtgacgatgatgatgataat
gatgggattccagacctcatgcccccgggcccggataactgcagactggttcccaaccca
ggacaggaagatgacaaccgtgatggagttggtgatatatgtgaatcggattttgaccag
gacacagtaattgatcaaattgatatttgccctgagaatgctgagatcaccctgacagat
ttcagggcttatcaaactgtggtcctggatcccgaaggtgatgctcagattgatcctaac
tggatgattctgaaccagggtatggagattgtacagaccatgaacagtgatcctggcctt
gcagttggttacacagctttcaatggggttgactttgaaggcacctttcatgtgaatacg
gtgacagatgatgactatgctggctttatatttggttaccaagacagttccagtttttat
gtggtaatgtggaagcagacagaacagacttactggcaagcaactccattcagagctgtt
gcagagcctggcattcagcttaaggctgttaaatctaagactggtcctggcgaacacctc
aggaattcactctggcatactggggacaccaatgaccaagtcagactgctttggaaagac
cccagaaatgtaggttggaaagataaagtctcttatcgatggttcttacagcacagaccc
catgttggatacatcagggcaagattttatgaaggttctcaactggtggcagattctgga
gtaactgtagacactaccatgcgtggaggaagacttggtgttttctgcttctctcaggaa
aacattatttggtccaacctgaaatatcgctgcaatgacaccatccctgaggactttcag
gaatttcaagctcagcagcttggagttggagatattttaacacagaaagcaaactga
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