Dermochelys coriacea (leatherback sea turtle): 119855660
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Entry
119855660 CDS
T09064
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc02010
ABC transporters
dcc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
119855660 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119855660 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dcc02000
]
119855660 (ABCA1)
Transporters [BR:
dcc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
119855660 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
119855660
NCBI-ProteinID:
XP_038258060
LinkDB
All DBs
Position
5:complement(133344520..133491317)
Genome browser
AA seq
2261 aa
AA seq
DB search
MAFWTQLGLLLWKNFTYRRRQTFQLLIEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGESPGVVGNFNRSIISRLFSDAKRLLLYSQKDS
SLKDAQKLLEKLQKLRNSGSGLKLQDFLVDNETFSDFLHHNVSMPLFAVDEILNAEVNLQ
RVILSGYRMQLRDLCNGSELSEFVTIHNPIVAVVSEAFLCTMPKEKLHTAEQTFRANIDL
LKPILKGIASNSSLQDLSGAMETLVESLGTLVKELVSMKSWSDMRQEVIFLTNVNSTSSS
TQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTEEDAANFYDNSTTPYCNE
LLKNLESSPLSRIIWRALKPLLIGKILYTPDTPVTRRIMAEVNRTFQELGVFRDLGGMWE
EIGPKIWTFMESSQEMDLIRALLKSKGLWDTHLSGSNWTVQDVSLFLAKSPEDVQPVNGS
TYTWMDAFNETDQAVQTISRFMECVNLDKLEPVATEVRLINRSMELLDERRFWAGIVFPE
ISPNSVELPPHIKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFVYLQDVV
EQAIIRVLTGTEKKTGVYVQQMPYPCYVDDIFLRVMGRSMPLFMTLAWIYSVAVIVKGIV
YEKEARLKETMRIMGLDNGTLWFSWFISSLIPLLMSAGLLVLILKMGNLLPYSDPSVVFI
FLSVFAVVTILQCFLISTMFSRANLATACGGIIYFTLYLPYVLCVAWQDYVSFSLKMFAS
LLSPVAFGFGCEYFALFEEQGVGVQWDNLFESPLEEDGFNLTTSAFMMLFDTFLYGVMTW
YIESVFPGQYGIPRPWYFPFTKSYWFGEESEERRHARSDHKGPSEHCMEEEPNHLSLGVS
IQNLVKIYRDGKKVAVDGLTLNFFEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFIL
GKDIRSDLSTIRQNLGVCPQHNVLFDLLTVEEHIWFYARLKGLSEEKVKEEMQQMVLDVG
LPHKLKSRTSKLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQG
RTIILSTHHMDEADILGDRIAIISHGKLCCIGSSLFLKNQLGTGYYLTLVKKDVDSSLSS
CRNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTIDVSVISNLIMKHVPEARLVEEIG
HELTYILPYEAAREGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEDNGVDAET
SDGTLPARRNRRVFGDRQSCLHPFTEDDAFDPNDSDIDPAESRETDLLSGMDGKGSYQMK
GWKLIRQQFVALLWKRLLIAKRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLELQ
PWMYDEQYTFLSNDAPDDAGTQKLVNTLVNEPGFGTRCVEGHSIPDTPCLVREDKWTTAS
VPDTVLNIFLNSNWTMENPSPACECSNEKIKKMLPVCPPGAGGLPPPQREQNTGDILQNL
TGRNVSDYLVKTYAQIIGKSLRNKIWVNEFRYGGFSVGASSSLLLPPSNEVSDAIKQVKK
ILELAKGSSGDQFLHSLGSFMKGMDTKNNVKVWFNNKGWHAIGSFLNVINNAILRANLQD
GKNPSTYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQER
VSKAKHLQFISGVKPVIYWLANFVWDMCNYIVPATLVIIIFICFQQKSYVSSSNLPALAL
LLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNIN
EILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEG
AVFFLITVLIQYRFFIKPRSVSAKLPPVNDEDEDVTRERQRIISGGGQSDILEIKELTKI
YRMKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGEAFLKGNSILSN
IQGVHQNMGYCPQFDAINELLTGREHLEFYALLRGVPEKEVCQVGEWAIRKLGLVKYGEK
YAGNYSGGNRRKLSTAIALIGSPPVVFLDEPTTGMDPKARRFLWNCALSIIKEGRSVVLT
SHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGANPNLKPVQEFFG
LAFPGSVLKEKHRNMLQYQLPSSPSSLARIFSILSQNKKRLHIEDYSVSQTTLDQVFVNF
AKDQSDDDHTKDMSLHKNQTVVDITILTSFLRDEKVKESCV
NT seq
6786 nt
NT seq
+upstream
nt +downstream
nt
atggctttctggacacagttgggattgctgctatggaagaacttcacctacaggagaagg
cagacatttcagctgctgattgaagttgcttggcctctctttatcttctttatactgatc
tccgtacgcctttcatatccaccctatgaacaacatgaatgtcactttccaaacaaggcc
atgccttcagcgggaaccttgccctgggtccaagggattatctgtaatgccaacaaccct
tgcttccgctacccaacgcccggggaatccccaggtgtcgttggaaacttcaacaggtcc
atcatttcccgcttgttctctgatgccaagaggttactgttgtacagccagaaggacagc
agcttaaaggatgctcagaaactcctggaaaaactgcagaagctcaggaactctggctca
ggtttgaaacttcaggattttctggttgacaatgagaccttctcagactttctccatcat
aatgtttccatgccgttgtttgctgtggatgagatactgaatgcagaggtcaacctccag
cgggtcatcctgtctggctatcgaatgcagctgagagatctgtgcaatgggtcagagctg
tccgaattcgttacaatccacaatccaatagtcgcagtggtcagtgaagccttcctctgc
accatgcctaaggaaaaactacacacagcagagcaaacctttcgtgctaatatagacctt
ttgaagcctatactgaaaggaattgcctccaattcctccttacaggatctgtcaggagcc
atggagaccttggtggagagtcttgggacactcgttaaagagctggtgagcatgaagagc
tggagtgacatgaggcaggaggtgatatttctgaccaatgtgaactccacaagctcctct
acccagatctaccaggcggtgtcgcggatcgtgtgtggccatccggagggaggagggttg
aaaatcaaatctctcaactggtacgaggacaacaactacaaagccctgtttggaggcaac
agcaccgaggaggatgcagcaaatttctatgataattctacaacaccctattgcaatgag
ctgctgaagaatcttgaatccagtccgctttcccgaattatttggagggctctgaagcct
ttgcttattgggaagatcctgtacactcctgacaccccggtcacgaggaggatcatggct
gaggtgaacaggactttccaggagctgggcgtgttccgggacctaggagggatgtgggag
gagataggcccgaagatttggacgttcatggaaagcagccaggaaatggatctgatccgg
gcactgctgaagagcaaaggcctctgggacactcacttgagcggctcaaactggacagtt
caagatgtttccctgttcttggcaaagtccccagaggacgttcagccagtgaatggctcc
acatacacctggatggatgccttcaatgagactgaccaggctgtccaaaccatctcccgc
ttcatggagtgtgtcaacctggacaaactggagcccgtggccacagaagtgcggctcata
aacaggtccatggagctcctggatgaaaggaggttctgggctggcattgtcttccctgaa
atctccccaaacagtgtagagctgcctcctcacatcaagtacaagatacggatggacata
gacaatgtggaaaggacaaacaagattaaggatgggtactgggaccctggtcctcgtgct
gacccctttgaagacatgcggtatgtctggggcggcttcgtgtatttgcaggatgttgtg
gagcaagcgatcatcagggtgctgacgggcacagagaaaaagactggtgtctacgtacag
cagatgccctacccctgttacgtggatgatatcttcctgcgtgtcatgggccgttccatg
cccctcttcatgactctggcttggatctactcggtggctgtaatagtcaagggaattgtg
tacgagaaggaagcccggctgaaggagaccatgagaatcatgggcctggacaatggcacc
ctctggttcagctggttcatcagcagcctcatccccctcctcatgagcgctgggcttctg
gtgctgatcctgaagatgggaaacctgctgccctatagcgaccctagtgtggtgtttatc
ttcctctccgtcttcgccgtggtgaccatcttgcagtgcttcctcatcagcaccatgttc
tccagggccaacctggcaacagcctgtggggggatcatctatttcaccctctacctgccc
tacgtgctgtgcgtcgcctggcaggactacgtgagcttctcactgaaaatgtttgcgagc
ctgctgtccccagtcgcctttgggtttggctgcgagtactttgcattgtttgaggagcag
ggggttggcgtgcagtgggacaacctctttgaaagccccctggaagaagatggcttcaac
ctcaccacatctgccttcatgatgttgtttgataccttcctctatggagttatgacctgg
tacattgagtctgtcttcccaggccagtatggaattcccaggccctggtacttccccttt
acaaagtcttactggttcggtgaggaatctgaggagaggcggcacgctcgttctgatcac
aaagggccgtcggagcactgcatggaggaggaacccaatcatctaagcctgggggtctcc
attcagaacctggtgaagatttatcgtgatggcaagaaggttgctgtggatgggctcaca
cttaatttctttgaagggcagatcacatcctttctgggacataatggagcggggaaaacc
acaaccatgtccatcttaactggtttatttcctccgacctcgggcacggccttcatcctg
ggcaaagatatccgctccgacctcagcaccatcaggcagaacttgggtgtctgtccccag
cacaatgtcctctttgacttgctgactgtggaagagcacatctggttctacgcacgtttg
aaagggctgtcagaagaaaaggtgaaagaggagatgcagcagatggtgctggatgttggc
ctgcctcacaaactcaaatctagaaccagcaaactctctggtggcatgcagagaaagctg
tcagtggccttggcctttgtgggtggatcaaaggttgtcattttggacgagccaacagct
ggggtggatccttactctcgccgagggatatgggaactgcttctgaagtatcgccaaggc
cgcaccatcattctgtccacacaccacatggatgaggcagacatcctaggggacaggatc
gccatcatttctcatggcaaactgtgctgcattggctcttccctgttcctgaagaaccag
ctgggaacaggctattacctgaccctggtcaagaaggatgtggactcttcgctgagctcc
tgcagaaacagcagcagtacggtgtcgtacctgaaaaaggacgacagtgtctcccagagc
agctcagatgctgggcttggcagtgaccatgaaagtgataccttgacaatagacgtctct
gttatctccaacctcattatgaagcatgttcctgaggccaggctggtagaggagattggc
catgagttaacctacatcttgccatatgaagctgctagagagggagcttttgtggagctg
ttccatgagatcgacgaccgtctctctgacctgggcatttcgagttacggcatctcggag
actaccctggaggaaatctttctcaaagtggctgaagataatggggtggatgcagagacc
tcagatggcacattacctgcaagaaggaacaggcgtgtctttggagacagacagagctgc
cttcatccattcacagaagatgatgctttcgaccctaatgattcagacatagatccagca
gaatccagagagacagacctgctcagtgggatggatggcaaaggctcctaccagatgaag
ggctggaagctcatccggcagcagttcgtagctctgctgtggaagaggctgctcattgcc
aagcgcagcaggaagggtttcttcgcccagatcgtactgccagctgtgtttgtgtgcatt
gctctcatgttcagcctgatcgtgcccccctttgggaaataccccagcctggaactgcag
ccctggatgtatgatgagcagtacacttttctcagcaatgacgcaccagatgatgcaggc
actcagaagcttgtgaacactcttgtcaatgaacccggctttgggacccgctgtgtggaa
ggacactccattccagacacgccttgcctggtcagagaggataaatggaccaccgcctct
gtccccgacacagtcctgaacatcttcctgaacagcaactggaccatggagaacccctcc
ccggcctgcgaatgcagcaatgagaagatcaagaaaatgctccctgtgtgcccacccggc
gcgggggggctgcctcctccacagagagaacagaacactggcgacatcctgcagaacctg
acgggccggaacgtatcggactatctggtgaagacctacgcgcagatcattgggaaaagt
ttaaggaacaagatctgggtgaatgagttcaggtatggtgggttttcagtgggcgccagc
agttccctcctgcttcctcccagcaatgaagtcagtgatgccatcaagcaagtgaagaaa
atcttggagctagccaaggggagttctggagatcagtttcttcacagcttgggaagcttc
atgaaagggatggacacaaaaaacaatgtgaaggtttggttcaataacaaaggctggcat
gccattggctccttcctgaatgtgatcaacaatgccatcctccgggccaatcttcaggac
ggcaagaatcccagcacttacgggatcaccgcgttcaatcacccgctcaatctcaccaag
cagcagctctccgaggtcgccctgatgaccacgtcggtggacgttttagtctccatctgt
gtgatcttcgccatgtcctttgtcccagccagttttgtggttttcttgatccaggagcgg
gttagcaaggccaagcacctgcagttcatcagtggggtgaagccggtgatctactggctg
gctaacttcgtctgggatatgtgcaactacatagttccagccaccttggttatcatcatc
ttcatctgcttccaacagaagtcctacgtgtcctcttccaacctgcctgcgctggccctt
ctcctcctgctctatgggtggtctataacgccactcatgtacccagcttcctttgtgttc
aaaatccccagcacagcctacgtggtgctgaccagcgtgaatctcttcattggcataaat
ggcagcgtggccactttcgtcctcgagctcttcaccaacaacaagctgaacaacatcaat
gaaatcttgaagtctgtgttcctcatcttcccccacttctgcctggggcggggactgatc
gacatggtgaaaaatcaggccatggccgacgctttggaaaggtttggtgagaaccgtttt
gtgtcccctctgtcctgggatctggtgggacggaacctctttgccatggctgtggaaggg
gcagtcttcttccttatcacagtgctcatccagtacaggttcttcatcaaaccgcggtct
gtcagtgccaagttgcctcctgtgaatgatgaggatgaggatgtgaccagggagaggcag
aggataattagtggtggcggacagagtgacatccttgaaatcaaagagctgaccaagatt
tatagaatgaagagaaaaccagctgttgaccggatctgtgttggaatccctcctggggag
tgctttggcctcctgggagtgaatggcgctggcaagtcgtcaactttcaagatgctaact
ggagatacagatgtgacgggaggagaagcttttctgaagggaaacagtatcttatctaac
atccaaggagtccatcagaacatgggctattgccctcagtttgatgctattaatgagctg
ttgacagggagagaacatctggagttctatgcacttttacggggtgttcctgagaaagag
gtctgccaggttggcgaatgggcaattcgtaaactgggccttgtgaaatatggagaaaaa
tatgctgggaactacagtggagggaacagacgcaagctctccactgctattgccctgatt
gggagccctccagtggttttcctggatgagccaaccacaggaatggatcccaaagcacgc
cgtttcttatggaactgtgctttgagcatcatcaaggaggggagatcagtggtacttacg
tctcacagcatggaagaatgcgaagccctgtgcactcgaatggcaataatggtcaatggg
cggttcaggtgtcttggcagtgtccagcatctgaagaacaggtttggagatggttataca
atagtagtgcgaatagcaggggcaaaccctaacctgaagcccgttcaggaattctttggg
cttgcctttcctggcagcgtcctgaaggagaagcatcggaacatgcttcagtaccagctc
ccatcctcaccatcctctctggctaggatatttagcatcctctcccagaacaaaaaaaga
ctccacatagaagactactccgtttctcagactacacttgatcaagtgtttgtaaacttt
gccaaggaccaaagtgatgatgaccacacaaaggacatgtcattacacaaaaaccagact
gttgtggacattacaatccttacttcctttctgcgagatgagaaggtgaaagaaagttgt
gtgtga
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integrated database retrieval system
