Dermochelys coriacea (leatherback sea turtle): 119855741
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Entry
119855741 CDS
T09064
Symbol
RNF38
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38 isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcc04121
]
119855741 (RNF38)
Enzymes [BR:
dcc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119855741 (RNF38)
Ubiquitin system [BR:
dcc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119855741 (RNF38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
VPS18_RING_C
zf_RING_Vps8_fungal
zf-C3H2C3
zf-RING_16
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
119855741
NCBI-ProteinID:
XP_038258313
LinkDB
All DBs
Position
5:127727080..127923226
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AA seq
524 aa
AA seq
DB search
MSGAAAHFQPPPPLHGPSLPEQGVRSPAGHGHPRAAPAPGSNGASFQCQSIHQDHICNDD
SDKSEDSPSPKRQRLSHSVFDYTAASPAPSPPMRPWEMTSNRQPPSARPNQHHFSGERCN
TPARNRRSPPVRRQRARRDRLSRHNSISQDENYHHLPYGQQQAIEEPRAFHPPNVSPRML
HPAAHPPQQNAVMVDIHEQIHQGTVPVSYTVTTVAPHGIPLCTGQHIPACNTQQVPGCSV
VFSGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLLHPPHLSPHHPPHLPPPG
QFVPFQTQQSRSPLQRIENEVELLGEHLPVGGFTYPPSAHPPTLTPSAPLQFLTHDPLHQ
EVSFGVPYPPFMPRRLTGRSRYRSQQPIPPPPYHPSLLPYVLSMLPVPPAVGPAFSFELD
VEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFE
SRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgagcggggccgccgcgcacttccagccgccgccgcccctccacgggccgagcctcccg
gagcagggagtccgcagccccgccggccacgggcacccccgggccgcccccgcgccaggt
agtaatggtgcttccttccaatgccagtcaatccatcaagaccacatttgtaatgatgac
agtgataagagtgaagacagtccgagtcctaagagacaacgcctttctcattcagtcttt
gactatacagccgcatcaccagccccatcaccgccaatgcgaccatgggagatgacatca
aataggcagcctccttcagctcgacccaaccaacatcacttctcaggggaacgatgcaac
acacctgcacgcaacaggaggagtcctcctgttagacgccagagagcgagaagggatcgc
ctgtctcgacataattccattagtcaagacgaaaactatcaccatctcccctatggacag
caacaagcaatagaagagccccgagccttccacccaccgaatgtatcccctcgtatgttg
cacccagccgctcatccgccacagcagaatgcagtgatggttgacattcatgaacagatc
caccagggcacagtccctgtttcctacacagtaacaacagtggcaccacatgggattcca
ctctgcacaggccagcacataccagcttgtaacacacagcaggtcccaggatgttctgtg
gttttcagtggacagcaccttcccgtctgcagtgtgcctcctccaatgcttcaggcatgc
tcagtccaacacttaccagtgccatacgcagcatttccaccccttatttctagtgatcca
tttcttttgcatcctcctcacctctctccacaccatcctcctcacctgccaccgccaggc
cagttcgttcccttccaaacacaacagtcacggtcgccacttcaaaggatagagaacgaa
gtagaactgcttggagaacaccttccagtaggaggttttacctaccctccctcagcccat
ccaccaacattgactccctcagcccctctccagttcttaacgcacgaccctttacaccag
gaggtgtcctttggagtaccttatccaccctttatgcctcgaagactcacagggcgcagt
agatatcgatcccagcagccaataccaccacccccttatcatcccagcctgttaccatat
gtgctatcaatgcttccagtgccacctgcagttggaccagctttcagcttcgagttggat
gtggaagatggagaggtggaaaactacgaggcactgctaaatttggcagaacgattggga
gaagccaaaccgcgaggactgacaaaagcggacattgaacagcttccatcttaccggttc
aatccaaacaaccaccagtcagaacagactttgtgcgtagtatgcatgtgtgattttgag
tcaaggcagctacttagagtcttaccttgtaaccacgagttccatgccaagtgtgtcgat
aaatggcttaaggcaaatcgtacctgcccaatttgtagagctgatgcttcagaagtgcat
cgtgattcagaatga
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