Dermochelys coriacea (leatherback sea turtle): 119855751
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Entry
119855751 CDS
T09064
Symbol
YTHDC2
Name
(RefSeq) 3'-5' RNA helicase YTHDC2 isoform X1
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcc03041
]
119855751 (YTHDC2)
Enzymes [BR:
dcc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119855751 (YTHDC2)
Spliceosome [BR:
dcc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
119855751 (YTHDC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
HA2_C
OB_NTP_bind
Helicase_C
R3H
DEAD
HA2_N
nSTAND3
AAA_22
AAA_19
Ank_2
ATPase
Ank
Ank_4
AAA_7
AAA_23
AAA_16
AAA_29
SRP54
PhoH
ABC_tran
T2SSE
Motif
Other DBs
NCBI-GeneID:
119855751
NCBI-ProteinID:
XP_038258331
LinkDB
All DBs
Position
5:73092485..73147694
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AA seq
1435 aa
AA seq
DB search
MSRPSSVSPRPPSSALCGGGPAAAAAAAAASGSGSGRARGLKDIRIDEEVKIAVNIALER
FRYGDQREMEFPSSLTSTERAFIHRLSQSLGLISKSKGKGANRYLTIKKKDGSELAHTVM
ACSLTPNTKHAIRSLIQRFPVTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNGIP
QIPVKRGESEFDSFRQSLPVFEKHEEIVRIIKENKVVLIVGETGSGKTTQIPQFLLDDCY
KNGIPCRIFCTQPRRLAAIAVAERVAAERREKIGQTIGYQIRLESRVSPKTLLTFCTNGV
LLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDILQKQTTLKLILSSAALDVNL
FIRYFGSCPVIHIQGRPYEVKEMFLEDILRSTGYTNKEMVKYKKEKQREEKQQTTLTEWY
SAQDNASKPESQRQRSIPSVAEEYDLLDDGGDTVFSQLTEKDVNCLEPWLIKEMDSCLSD
IWLHKDVDAFAQVFHLILTENVSVDYRHSETSATALMIASGRGFLSQVEQLIGMGANVHS
KSSNGWMALDWAKHFGQTEIADLLESYSASLEFGNLDESSLVQANGGDLSAEDRELLKAY
HHSFDDEKVDLDLIMHLLYNICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKKFADNAHR
YQVFMLHSNMQTSDQKKVLKTPPPGIRKIILSTNIAETSITVNDVVFVIDSGKMKEKSFD
ALNCVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQE
LCLHTKLLAPINCPIADFLMKAPDPPPSLIVRNAVQMLKTIDAMDTWEDLTELGYHLADL
PVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFS
DHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGG
GDIRDVNTNSENWAVVKGALVAGMYPNLVHVDRENLVLTGPKEKRVRFHPTSVLSQPQYK
KIPPANGQAAAIQALPTDWLIYDEMTRAHRIANIRCCSAVTPVTVSLFCGPARLPSNALQ
EPSSFRVDGVLNDSSDSEMEDRTTANLAALKLDEWLHFKLDPEAASLLLQLRQKWHSLFL
RRMRAPSKPWSQVDEATIRAIIAVLSTEEQSAGLQQPSGIGQRPRPMSSEELPLASSWRS
NSSRKSSAETEFSDDSSNAEKVLMKSTSPAFHPPQKYKERGILHSKRSSDDRSDQSSVKS
TDSSSYPSPCASPSPPSSGKGSKSPSPRPNMPIRYFIMKSSNLRNLDISQQKGIWSTTPS
NERKLNRAFWESSMVYLVFSVQGSGHFQGFARMSSEIGREKSQDWGSTGLGGVFKVEWIR
KESLPFQFAHHLLNPWNDNKKVQISRDGQELEPQIGEQLLQLWDRIPLGEKNTTD
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggcccagcagcgtgtccccccggccccccagcagcgccctgtgtggcgggggc
ccggccgccgccgccgccgccgccgccgcctccggctcgggcagcggccgggccaggggg
ctgaaggacatccgcatcgacgaggaggtgaagatcgcggtgaacatcgccctggagcgg
ttccgctacggggaccagagagaaatggaatttccttcttctctgactagtactgaaaga
gcatttattcaccgactgagtcagtctcttggtctaatttctaaaagtaaaggaaaggga
gcaaacagatatttaaccataaagaagaaagatggatcagaattggctcatacagtaatg
gcctgtagtttgacccccaatacaaaacatgctattaggagcctaattcagagatttcct
gtgaccaataaagaacgcactgaacttctaccaaaaacagaacgaggaaatgtgtttgct
gttgaagctgagaacagagaaatgagtaagacaagtgggcgacttaacaatggcatccct
cagattcctgtgaaaaggggggaatctgaatttgattccttcaggcaatctctaccagtt
tttgaaaaacatgaggaaattgtcagaattattaaagaaaataaagttgttctgattgtg
ggagaaactggatctggaaaaactactcagattcctcaattccttcttgatgactgttac
aaaaatggaattccatgtcgcatattttgcactcagccaagacgtttggcagctattgct
gtggctgaaagggttgccgcagaaagaagagaaaagattggccagacaattggctatcag
atccgattagaaagcagggtttctccaaagacgctgctaacattttgcactaacggtgta
ttacttcgtacgctaatggcaggagacagcacgctatcgaccgtgacacatgttattgtg
gatgaagtacatgagagggatcgattcagtgacttcttgctaacaaagttaagagacata
ttgcaaaaacagacaactttgaaactgattctttctagtgctgctctggatgtgaatctc
tttatcagatattttggaagctgcccagtgatacacattcaaggaagaccatatgaagtt
aaggagatgtttctggaagatatcttacgaagtacaggatatacaaataaagagatggta
aaatacaaaaaagaaaaacagcgagaagagaaacagcaaaccaccctgacagaatggtat
tctgctcaagacaacgctagcaaaccagaatctcaaagacagagatctatcccaagtgtg
gctgaagagtatgacttgttggatgatggtggtgacacagtgttcagtcaactgactgaa
aaagatgtgaattgccttgaaccatggttaataaaagaaatggattcttgtctctccgat
atatggttgcataaagatgttgatgcatttgctcaggtgtttcaccttatcttaactgaa
aatgtcagtgttgattacagacacagtgaaaccagtgcaactgcactaatgattgcttca
gggagaggtttcttaagtcaggtagaacagctgattggaatgggagcgaatgtccacagc
aaatcatccaatggctggatggctttggattgggctaaacattttggacagactgagatt
gcagatcttctggaatcttacagtgcttcattagagtttggaaacctggatgaaagttct
ctagtgcaggcaaatggtggtgatctgagtgcagaagacagagaactattgaaagcttat
catcacagttttgatgatgaaaaggtggatctggatctgattatgcacctactttacaat
atatgtcatagttgtgatgctggagcagttttaatttttcttcctggatatgatgagata
gttggcttgagagatcgcattctgtttgatgacaagaagtttgccgataatgctcacaga
tatcaagtttttatgctgcattcaaatatgcaaacatcagatcagaagaaggtgctaaaa
actccacctccaggcattcgcaaaataattctttctactaatattgcagaaaccagcatc
acagtcaatgatgttgtctttgttattgactctggcaagatgaaagagaagtcctttgat
gcactgaactgtgttaccatgctaaaaatggtgtggatttcaaaagccagtgccattcag
agaaaaggcagggctggacgctgtcggcctggaatctgtttccgactcttcagcaggctc
cgatttcagaatatgttggaatttcagactccagaacttctaagaatgccactacaggaa
ctttgtttgcacacaaaactgctagcaccaattaactgtccaattgctgactttttgatg
aaagccccagatcctccgccatccttaattgtgagaaatgctgttcagatgcttaagaca
atagatgccatggatacctgggaagacctcacggaacttggttatcatctggctgacttg
cctgtagagccacaccttggtaaaatggtgttgtgtgctgttgttttgaagtgcctggat
cctattcttaccattgcttgcactcttgcatatcgagacccttttgtcctacctacacag
gcctcacaaaaacgtgcagccatgctgtgtagaaaacgttttactgcaggaacatttagt
gaccatatggcgcttctcagggcattccaggcatggcagaaggcacgaagtgatggctgg
gagagagccttctgtgagaagaattttctctctcaggctactatggaaatcatcatagga
atgagaacacagttgctcggtcagctcagagcatcaggttttgttagagccagaggtgga
ggcgatattcgagatgttaacaccaactctgaaaattgggctgtagtgaaaggtgcttta
gtggctgggatgtatccaaatctagtgcatgtggatagagagaacctcgtattgactggc
ccaaaggagaagagagtgcggtttcatcctacctctgttcttagccagcctcagtataaa
aagattcctccagcaaatggtcaagctgcagcaattcaagcactccccacagactggctt
atatatgatgaaatgactagagcacacaggatagccaacatcagatgctgttcagctgtg
acgcctgtcactgtgtccctcttctgtggtccagctcggttgccaagtaatgctttacag
gagccctcatcctttagagtggatggtgttcttaatgatagtagtgatagcgagatggaa
gacagaacaactgctaatctggctgcattgaagctagatgaatggctacatttcaaactg
gatcctgaggctgccagtctgctgctgcaactcagacagaaatggcatagtttatttctg
cgccgcatgcgagctccttctaaaccttggtctcaagttgatgaagcaactataagagca
atcatcgctgttttaagtactgaagagcagtctgcaggcttacagcaaccttcaggaatt
gggcaaagaccaagacctatgtcttctgaagaacttcccttagcatcttcttggagatca
aatagcagtaggaaaagctcagcagaaacagaattctctgatgactcttctaatgctgaa
aaagtcctaatgaaatctacatctccagcatttcacccgccacagaaatacaaagaaagg
ggtatcttgcattctaaacgaagttcagatgacaggtcagatcagtcatctgtgaaatcc
acagacagtagtagttatcccagcccatgtgccagtccttctccgccatcatctggaaag
ggatccaagtctccttcaccgagaccaaatatgccaattcgatacttcattatgaagagc
agcaacttgagaaaccttgatatttctcaacaaaaaggtatctggtctacaactccaagt
aatgagcgaaaactaaatagagccttttgggaaagcagcatggtttacttggtattttca
gttcaaggatcaggacattttcagggttttgctagaatgtcttcagaaataggacgtgag
aaaagtcaggactggggctctacaggcttgggaggagtgtttaaggtggagtggatccgg
aaagaaagtcttccctttcagtttgcacaccacttactcaacccttggaatgataataag
aaagtacaaataagcagggatggccaggaattggagccacagattggagaacagttgcta
cagctttgggatcgtattcctttaggagagaaaaacactactgattga
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integrated database retrieval system
