Dermochelys coriacea (leatherback sea turtle): 119855760
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Entry
119855760 CDS
T09064
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X1
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcc03021
]
119855760 (TAF1C)
Transcription machinery [BR:
dcc03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
119855760 (TAF1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
119855760
NCBI-ProteinID:
XP_038258352
LinkDB
All DBs
Position
5:complement(1093096..1109653)
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AA seq
962 aa
AA seq
DB search
MAFPGSLFPAFLRAGPPRDLPRPPPLAGWGGYGQVQGAGPSQPQERFIPLHSKKGERWAP
AEACAVPFLSPNTSCRVPTLTPHDILYVGQIQRKHQAGKTGGAALDFTGQLAHFFLDHPE
EAFSTMGQLLQEHFYLGEEQLQSKAQENTISVKTLVQELDRREGRRDCPWPQPSPRLRWF
SCLSRDWLFEVPLGLLAECVHEELALQWAKLLFDDAPTGGALAWLPTEDVAPTPRGCLVY
PGGEAMNLLCFQEVALEQVAGALQPRAHGCPAQFELSGRVRQVATAQVAGEALVGVRSDH
HCGAWRLRSGTAPAPLQVIRTDAPASCLTVSPHLPGELSVCTLSGAVYLWNIETGLQRLR
QDPETAFFREASPWRWSEFTAHPRVLSCADRTGLQCLDVRAPSSCQFDLFKVGEEAECQS
GERVMLPMYLGRAHPCQHLITTQFSVYVVDERFPLVPVLRWEHMLEAPPVFAHLSPGQTQ
ERSHKVLLGTHRTQELLLLQYTGGSHSACQLAGPPRRLHPIYQGLQHLPPQVTPQQGLLC
QRLTAPAAGVTAAHAGQGPLESLLVFQLSEAGDLFYQTLLHEPPAESESSAAPASPPSLP
APAAAGQPSPTWGASLGSGSEESGRLPPLPGTVSEGTADAGQAAAPEEARPSVGPSPAAA
ARYGCWLKALIRDWSRLPEHSQPQAPHTISHRRLFTGGELNQPAGDSALHGRARQLLRRA
MQERGCLAPWALGPPPAPLAMPHPVEPWAWPDDLSKRLTASWVGGWGEWWEEKLGMTRAH
KLHALRDRRRSLKQARSRHSLSGSFTSSVTYQSELSDFSACSQPPSQAREEQRPPAPVCH
QDLSPPRAGQGDLPPAPRQCWPASPLDSTSQRSGQEAWGSQDTEDSSQLLSSQTLSSRGI
PKERRKTLRDYLALFTEPAPQPLSELPASQASSLGSQHWGPSSQRQRSTGSQPHRKRPRM
GF
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcccgggctcgctcttccccgccttcctccgcgccgggcccccccgggacctg
ccccgcccgccgccgctcgcgggctggggcggctacgggcaggtgcagggggccggcccg
agccagccccaggagaggtttattccacttcacagcaagaagggcgagagatgggcccct
gctgaggcgtgtgccgtgccgttcctgtcccccaacacgagctgccgtgtccccacgctg
acgccccatgacatcctctacgtggggcagattcaaaggaagcaccaggccggcaagact
gggggggctgccctggacttcacagggcagctggctcacttcttcctggatcaccccgag
gaggccttcagcaccatggggcagcttcttcaggagcacttctacctgggggaggagcaa
ctgcagagcaaggcgcaggaaaacaccatctcagtgaagaccctggtccaggagcttgac
cggagggagggcaggcgtgactgcccctggccccagcccagcccacggctgcgctggttc
tcctgcctgtcccgggactggctgttcgaggtgcccctgggcctgctggccgagtgcgtc
catgaggagctggccctgcagtgggcgaagttgctgttcgacgacgccccgactgggggg
gcactggcttggctccccactgaggatgtggctcctaccccccgaggctgcctggtctac
ccaggaggggaggccatgaacctcctctgtttccaggaggtggccctggagcaggtggct
ggtgccctgcagccccgcgcccatggctgccccgcgcagttcgagctcagtggccgggtc
cgccaggtggccactgcgcaggtggccggggaagccctcgttggcgttcgctcggatcat
cactgtggtgcctggcggctccggtctggcaccgcccctgccccgctccaggtcattcgc
actgatgcgcctgcctcctgcctcaccgtcagcccccacctccccggggagctgtccgtc
tgcaccctcagcggggccgtgtacctctggaacatcgagactgggctgcagcgactgcgc
caggaccccgagacggcgttcttccgagaggcatccccctggcgctggagcgagttcacc
gcccacccgcgggtgctgagctgcgctgaccgcactggcctgcagtgcctcgacgtgcgg
gctccctccagttgccagtttgatctgttcaaggtgggagaagaagctgagtgccagagt
ggagagcgagtgatgctgcccatgtaccttggcagggcccacccctgccagcacctcatc
accacgcagttctcggtgtatgtggtggacgagcgcttccccctggtgccggtgctgcgt
tgggagcacatgctggaggccccacctgtctttgcccatctcagcccgggccagacccag
gagaggagccacaaggtgctgctgggcacccaccgcacgcaggagctactgctgctgcag
tacacgggtggcagccattcggcctgccagctcgcagggcccccccggcggctccatccc
atctaccagggtctgcagcacctccccccgcaggtgaccccccagcagggcctgctgtgc
cagaggctgactgcacctgcagctggtgtgacggccgcccacgccgggcaggggccgctg
gagtccttgctggttttccagctctccgaggccggggacctgttctaccaaaccctgctg
cacgagccgccggcagagagcgagtcgtcggctgcccccgcctcgcccccgtccctgcca
gctcctgctgcggccggccagccctcgcccacgtggggcgcctccctgggctcgggcagc
gaggagagcggccgcctgcctcccctgccagggactgtctccgagggcaccgccgatgcc
gggcaggcagcagccccggaggaagccaggcccagcgtgggccccagcccggcagccgct
gcccgctacggctgctggctgaaagctctcatcagggactggagccggctgccggagcac
agccagccccaggccccccacaccatcagccatcggcgcctcttcaccggtggggagctg
aaccagccggccggggacagcgccctccatggccgagcccgccagctgctgcgccgggcc
atgcaggagcggggctgcctggcgccctgggccctggggccgccccccgcccccctggcc
atgccccaccccgtggagccctgggcctggcccgacgacctgagcaagcggctgacggcg
tcgtgggtgggcggctggggcgagtggtgggaggagaagctgggcatgaccagggcccac
aagctgcacgcgctgcgggaccggagacggagcctgaagcaagcgcggagccgccacagc
ctgtcgggcagcttcacctcctccgtcacctaccagtccgagctcagtgacttctctgcc
tgcagccagccccccagccaggcccgcgaggagcagcgacccccggcccctgtgtgccac
caggacctttccccaccgcgggcgggacagggggacctgcccccagcccctaggcagtgc
tggccggcctccccactggacagcacctcccagcgcagcgggcaggaggcctggggcagc
caggacacggaggactcctcccagctgctctcgtcccagaccctgagctcgcggggcatc
cccaaggagcgcaggaaaaccctgcgggactacctggccctcttcaccgagcctgccccg
cagcccctgtccgagctgcctgcgagccaggcctccagcctgggcagccagcactggggc
ccctcctcccagaggcagcgctccaccgggtcgcagccccaccgcaaacggccccgcatg
ggcttctga
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