Dermochelys coriacea (leatherback sea turtle): 119855793
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Entry
119855793 CDS
T09064
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03013
Nucleocytoplasmic transport
dcc03015
mRNA surveillance pathway
dcc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119855793 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
119855793 (NCBP1)
03015 mRNA surveillance pathway
119855793 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcc03019
]
119855793 (NCBP1)
03041 Spliceosome [BR:
dcc03041
]
119855793 (NCBP1)
Messenger RNA biogenesis [BR:
dcc03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
119855793 (NCBP1)
Spliceosome [BR:
dcc03041
]
Common components
Common spliceosomal components
Cap binding complex
119855793 (NCBP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
Importin_rep_6
C24B10_03
Vfa1
DUF1690
Motif
Other DBs
NCBI-GeneID:
119855793
NCBI-ProteinID:
XP_038258462
LinkDB
All DBs
Position
5
Genome browser
AA seq
795 aa
AA seq
DB search
MSRRRHSDENDGGQPHKRRRTSEPSEIEERLESLICRVGEKSTSSLESNLEGLAGVLEAD
LPNYKSKILRILCTVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKECLKANM
YNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRCDWYVFAFLSSLPWV
GKELYEKKDAEMDRILSQTESYLKRRQKIHVPMLQVWSADKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEG
PVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLLSYPGNNKIPLNYHIVEVVFAELF
QLPVPPHIEVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFMNWFSHH
LSNFQFRWSWEDWSDCLTHDLDKPKPKFVREVLEKCMRLSYHQRIIDIVPATFSVLSPAN
PSCIYKYGDESNKSLPGYTVALCLTIAIKNKTSNDEIFGILKDVPNPNQDDDDDEGFTFN
PLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVVYEVWKNHPQM
IAVLVDKMIRTQIVDCAAVANWIFSPELAHDFTRFYIWEILHSTIRKMNKHVVKIQKELE
ETKARLARQHKRRDSDDDDDDDDRSSDREDGPLEEQIERLQEKVESAQSEQKNLFLVIFQ
RFIMILTEHLVRCETGGIDVITPWYKNCIERLQQIFLQHHQIIQQYMLTLENLLFTAELD
HHILAVFQQFCALQA
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggaggcggcacagcgacgagaacgatggaggacaacctcacaaaaggaggaga
acatctgagccatctgaaattgaagagagactggaatctttaatatgcagagtgggagag
aagagtacttcttctttggagagcaacttggaaggcctagctggtgtcttggaggcagat
ctaccgaactacaaaagcaagatattaagaattctttgtacagttgcacgtctgttaccc
gaaaagcttactgtttacacaacactagttgggttgctgaacgccaggaactacaatttt
ggtggggaatttgtagaagccatgattcgtcagctcaaagaatgtttgaaagccaatatg
tataatgaagctgtgtatttagttcgttttctatctgaccttgttaattgtcatgtaata
gctgcgccttcaatggtagccatgtttgagaactttgtgagtgtgactcaagaggaagac
gtgccccaggtgcgatgtgactggtatgtgtttgcgtttctgtcatctctgccctgggtt
gggaaggaactgtatgagaaaaaggacgctgagatggaccgcattttgtcccagactgaa
agctatttgaaacggcgtcagaagatccatgtacccatgttacaagtttggtctgctgac
aaaccacatccacaagaagagtatttagactgcctttgggcccagattcagaagttgaaa
aaagatcgctggcaggaaagacacattctgaggccctatcttgcctttgacagcatcctc
tgtgaagccctgcagcacaatctgcctccttttactccaccacctcacactgaagattca
gtttaccctatgccgagagttatctttagaatgtttgactacacagatgatcctgagggt
cctgttatgcctggtagtcattcggttgagagatttgtaatagaagagaatcttcactgc
atcatcaaatcccactggaaagagagaaaaacgtgtgctgcacagctactgagctatcca
ggaaataacaagatccctttgaactatcacatagttgaggtagtattcgcagaactgttt
cagcttccagttccaccacacattgaggtcatgtacacaacacttctgattgaattgtgc
aaacttcaacctggctctttaccacaagttcttgcacaagccacagaaatgctgtacatg
cgcttggataccatgaacactacgtgtgtagacaggttcatgaactggttttcccaccat
ctgagtaactttcagttccgttggagctgggaagattggtcagattgtcttactcatgac
cttgacaagcccaaacccaagtttgtaagagaagtcttggaaaaatgcatgagactttca
taccatcagcgaataatagatattgttcctgctaccttctctgtccttagtcctgcaaac
ccatcgtgtatttataaatatggagatgaaagcaataagtctctgccaggatatactgtc
gcactctgtttgaccattgccattaaaaacaagacaagtaatgatgaaatcttcggcatc
ttaaaagatgtgcccaatcctaaccaggatgatgacgacgatgaaggattcacctttaac
cctttgaaaatagaagtttttgtacagactctgctccatttagctgccaagtccttcagc
cactcattcagtgctctggcaaagtttcatgaagtcttcaaaacactcgctgaaagtgat
gaggggaagctccatgtgctgagggttgtgtatgaggtctggaagaaccatccacagatg
attgctgtgcttgtggataagatgattcggacgcagatagttgattgtgctgctgtagca
aactggatcttctctccagagcttgctcatgattttactaggttctatatctgggagatc
ttgcactccacaattcgtaagatgaacaagcacgtagtgaagatccaaaaggaactagag
gagactaaagcaagattagccaggcaacacaaacgacgagacagtgatgatgatgatgat
gacgatgaccgaagcagcgatagggaagatggaccattggaagagcagatagaacgcttg
caggagaaagtagagtctgctcagagcgaacaaaagaatctcttccttgttatattccag
cgtttcattatgatattaacagagcatttagtgcggtgtgaaactggtgggattgatgta
attacgccttggtacaagaactgtatagagagactgcagcagatcttcttacagcaccac
cagataatccagcagtacatgctgaccttggagaaccttctgtttacagctgaactggac
catcacatattggctgtatttcagcaattctgtgctctgcaggcctga
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