Dermochelys coriacea (leatherback sea turtle): 119856637
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Entry
119856637 CDS
T09064
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119856637 (CSTF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcc03019
]
119856637 (CSTF3)
Messenger RNA biogenesis [BR:
dcc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
119856637 (CSTF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
PRP6_TPR
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
119856637
NCBI-ProteinID:
XP_038260300
LinkDB
All DBs
Position
6:35653323..35725142
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AA seq
718 aa
AA seq
DB search
MSGEGAAGDQAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVA
QFPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYK
EKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNP
MINIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPP
QNTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQ
YLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKV
HSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALME
YYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPE
KSGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSAS
ELKALGYKDVSRAKLAAIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAP
PGLHPVPGGVFPVPPAAVVLMKLLPPPVCFQGPFVQVDELMEIFRRCKMPETVDEAVRII
TGGLPELTVEGNGPVENNTMFNKAVKRPNEDSDDEEEKGSVVPPVHDIYRARQQKRIR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagagggagccgctggcgaccaggctgctgaatatgttccagaaaaagtgaag
aaggctgaaaagaaattagaagagaatccatatgaccttgacgcttggagcattctcatt
cgagaggcacagaatcaacctatagacaaagcacggaagacctatgaacgccttgttgcc
cagttccccagttctggcagattctggaaactgtacattgaagcagagattaaagcaaaa
aattatgacaaagtagaaaagttgtttcaaagatgccttatgaaagtgctacacatagat
ttgtggaagtgttacctttcgtatgtacgtgaaaccaagggaaagctacccagttacaaa
gaaaaaatggctcaggcatatgactttgctctggataaaatcggcatggaaatcatgtca
taccagatctgggtggattacatcaattttttgaaaggcgtagaggcagttggatcttat
gcagaaaaccagaggataacagctgttcgtagggtttaccagcgaggttgtgtgaacccg
atgatcaacattgaacaactctggagagattataacaaatatgaagagggaatcaatatt
cacttagctaaaaaaatgattgaagatcggagtagagattatatgaatgctagacgtgtg
gccaaggaatatgagactgttatgaaaggtctggatcgcaatgctccctccgtcccccca
cagaatactccccaagaggctcagcaggttgacatgtggaagaaatatatccagtgggaa
aagagtaatccattgcgcacagaagaccaaactctcataacaaaaagagttatgtttgct
tatgagcagtgcctgttggtcctcgggcatcatccagatatctggtacgaggctgcacag
tatcttgagcaatccagtaagctgctagctgagaaaggggacatgaacaatgctaaactg
ttcagtgatgaggctgctaatatttatgaaagagcgatcagcactttactaaagaagaac
atgcttctgtactttgcatatgcagactatgaagagagtcgaatgaagtatgagaaggtg
cacagcatatataaccggctcttggctattgaagatattgatcccactttggtatatata
cagtatatgaaatttgcaaggcgggcagaaggcatcaaatctggaagaatgatattcaag
aaagcgagagaggatgcccggactcgccatcatgtctatgttacggcagctttgatggag
tattactgtagtaaggacaagtcagtggccttcaagatttttgagttggggctgaagaaa
tatggagacattccagaatatgtactggcatacattgactatttgtctcaccttaatgag
gacaataatacaagagttttgtttgaacgtgttttaacatcaggaagcctcccacctgag
aaatctggagaaatctgggcccggtttttagcttttgaaagtaacattggtgatctagct
agtatacttaaagtggaaaaacggaggtttacagccttcaaggaagaatatgagggtaaa
gagacagctctgctggtagataggtacaagttcatggatttgtacccttgctctgcaagt
gaacttaaagctcttggttacaaggatgtctcacgtgccaagttagcagccataattcca
gaccctgtggtggctccttctatagtgcctgttctaaaagatgaagtggacagaaaacct
gaatacccaaaaccagacacgcagcagatgattccatttcagccaagacatttagcacct
ccaggtttgcatcctgtgccaggtggtgtatttccagtcccaccagctgctgtagtttta
atgaagctcctcccaccacctgtgtgttttcagggcccttttgtgcaagtggatgaactc
atggagatttttcgaagatgcaaaatgccagaaactgttgatgaagctgtaagaataatt
actggaggcctgcctgaattaactgtggaaggcaatggacctgtggaaaataataccatg
ttcaataaagctgtcaaaagaccaaatgaagattctgacgatgaagaggagaagggatca
gtggttcctcctgtacatgacatatacagagcacgacagcaaaagagaatccgatga
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