Dermochelys coriacea (leatherback sea turtle): 119857190
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Entry
119857190 CDS
T09064
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc04137
Mitophagy - animal
dcc04140
Autophagy - animal
dcc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119857190 (HIF1A)
04137 Mitophagy - animal
119857190 (HIF1A)
04148 Efferocytosis
119857190 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dcc03000
]
119857190 (HIF1A)
Transcription factors [BR:
dcc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
119857190 (HIF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
DUF2121
Motif
Other DBs
NCBI-GeneID:
119857190
NCBI-ProteinID:
XP_038261681
LinkDB
All DBs
Position
6:complement(115507856..115529779)
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AA seq
825 aa
AA seq
DB search
MRWRKECVCVTVITLPPVYVVNLKFYSYRISSDRRKEKSRDAARCRRSKESEVFYELAHQ
LPLPHTVSAHLDKASIMRLTISYLRMRKLLDASNLETEAKMEKEMNCFYLKALDGFVMVL
SEDGDMIYMSENVNKCMGLTQFELTGHTVFDFTHPCDHEELREMLTHRNGPMKKGKEQNT
ERSFFLRMKCTLTSRGRTVNIKSATWKVLHCTGHVRVYDTCNNQTLCGYKKPPMTCLVLI
CVPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLGHSIYEYYHALD
SDHLTKTHHDMFSKGQVTTGQYRMLAKHGGYVWVETQATVIYSTKNSQPQCIVCVNYVLS
EIVQKELFLSLAQTECMLKPVESPDMKIFSKADLEDTNSLFEKLKKEPDALTLLAPAPGD
TIISLDFSSNESDEQQYDEVPLYNDVMLPSSSEKLQNINLAMSPLPASETTKPLRSNADP
ALNREVVSKLEPNTEPLELAFSSHQRQEQPASPSDASTNQSSPEPRSPNEYCFDVDNDMA
NEFKLELVEKLFAIDTEAKNPFSTQETDLDLERLAPYIPMDDDFQLRSFDQPPSLESGCA
SAQSVATNTIFQQTHTPSTAAEEITPVKTECMDDIKTLLVSQSPVLIINETNSAPASPYG
GNRSRTASPIRAGKGTLDQTEKSYPGTPNLLTVTLSKRSAMNEELNPKMLALHNSQRKRK
MEYDGSLFQAVGIGSLFQQSEDCGANASLCWKRVKGCKSNGQSGVGQKTIILLSTDIASK
LLGQSMDETGLPQLTSYDCEVNAPVQGSRNLLQGEELLRALDQVN
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgagatggcggaaggaatgtgtttgtgtcactgtgataacgttgcctccagtgtatgtt
gttaatctaaaattttattcatacaggattagttcagatcgcagaaaggagaagtcaaga
gatgcagccagatgccgaagaagcaaggaatctgaagttttctatgaacttgctcaccag
ctgcctcttcctcatactgtcagcgcacaccttgacaaggcctccattatgaggctgact
atcagctacttacgcatgagaaagctgttagatgcaagtaacctggagacagaagccaaa
atggagaaggagatgaattgcttttacttaaaagcccttgatggatttgtcatggttctt
tccgaggatggtgacatgatttacatgtctgaaaatgtgaacaagtgtatggggctcact
cagtttgagctgactgggcacactgtatttgattttacccacccgtgtgaccatgaagag
ctgagagaaatgcttacgcatagaaatggtcctatgaaaaagggcaaagaacagaataca
gagcgtagctttttcctcagaatgaagtgcacgctgaccagcaggggaaggactgtgaat
ataaagtctgcaacatggaaggtacttcactgtacaggccatgttcgtgtgtatgatacc
tgcaataatcagactctctgtggatataaaaagcctcccatgacatgcttggtgttgatc
tgtgtacctatccctcatccatcaaacattgaagtccctttggacagcaagacattcctc
agtcgccacagcctggatatgaaattttcatattgtgatgaaagaattacagagctgatg
ggatatgagccagaagaactcttgggtcactccatctatgaatactatcatgctctggac
tctgatcatctgaccaaaactcatcatgatatgttctcgaaagggcaagtgactacagga
cagtacagaatgcttgctaaacacggtggatatgtctgggttgaaactcaagcaactgtt
atatacagcactaagaactcccaaccacagtgcatagtatgtgtaaattacgtcttgagt
gagattgtacagaaggagttatttctttcccttgcacaaactgagtgtatgctgaaacca
gtggagtctcctgatatgaaaatattcagcaaggctgacctagaagatactaacagcctc
ttcgaaaaacttaaaaaggaaccagatgctttaactttgctcgcaccagctcctggagac
acgattatctctttagatttcagcagtaatgagtctgatgagcaacaatatgatgaagtt
cctttgtataatgatgtaatgctcccctcatccagtgagaaattgcagaacataaatttg
gcaatgtccccacttcctgcctctgaaactacaaagccacttcgtagtaatgctgaccct
gcactcaatagagaagttgtatcaaagctggagccaaacacagagccactagaacttgca
ttttccagccaccagaggcaagaacagccagccagcccttctgatgcaagcactaaccaa
agttcacctgagccccgtagtcccaatgaatattgctttgatgtggataatgatatggct
aatgagtttaagctggaattagtggaaaaactctttgcaatagacacggaagcgaaaaat
ccattctctactcaggaaactgatttagacttggagaggttagctccttacatcccaatg
gatgatgacttccagttacgatcctttgatcagccaccttcactggagagtggttgtgcc
agtgctcagagtgtggctaccaataccatatttcaacaaactcatacgccatctactgct
gctgaggaaataacaccagtgaaaacagaatgcatggatgacattaagactctacttgtt
tctcagtctcctgtcctcataatcaatgaaaccaacagcgccccagcatcaccatatggt
ggaaaccgaagtcgaactgcatctccaatcagggctggaaaaggaacattggaccagaca
gagaaatcttatccaggaacacccaatttgttaacagtcactttgagtaaaagatctgca
atgaatgaagaactaaatccaaagatgctagctttgcataactctcagagaaagcgaaag
atggaatatgatggctcactttttcaagcagtgggaattgggtctttattccagcagtcg
gaagattgtggagcgaatgcatcactttgttggaaacgtgtaaaagggtgcaaatctaat
ggccagagtggagtgggacaaaagacaatcatcttgctatcaactgatatagcgagtaag
ctcctaggacagtcaatggatgagactggactaccacaacttaccagttatgattgcgaa
gtaaatgctcccgtacaaggcagcagaaacctgctacagggtgaagaattgctcagagct
ctggatcaagttaactga
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