Dermochelys coriacea (leatherback sea turtle): 119857915
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Entry
119857915 CDS
T09064
Symbol
NPAS3
Name
(RefSeq) LOW QUALITY PROTEIN: neuronal PAS domain-containing protein 3
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dcc03000
]
119857915 (NPAS3)
Transcription factors [BR:
dcc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
119857915 (NPAS3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
PAS_4
HLH
bHLH_NPAS4
DUF7510
Motif
Other DBs
NCBI-GeneID:
119857915
NCBI-ProteinID:
XP_038263376
LinkDB
All DBs
Position
6:79992787..80881758
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AA seq
963 aa
AA seq
DB search
MIRIFPDFSVQVTAAAAGGAAGGVPAGPGMGRASTAANGNPQNVQGITSYQQRITVQHPL
PNQSECRKIYRYDGIYCESTYQNLQALRKEKSRDAARSRRGKENFEFYELAKLLPLPAAI
TSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKGIQMWKSEVCMRKTPC
EVIGAQRRRSPSALAIEVFESHLGSHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQV
ELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPVES
TSPSLLTTDNTLERSFFIRMKSTLTKRGVHIKSSGYKVIHITGRLRLRVSLSHGRTVPSQ
IMGLVVVAHALPPPTINEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCY
HFIHAEDVEGIRHSHLDLLNKGQCVTKYYRWMQKNGGYIWIQSSATIAINAKNANEKNII
WVNYLLSNPEYKDTPMDIAQLPHLPEKTSESSETSDSESDSKDNSEDNENSKSDDKGNQS
ENSEDPESDRKKSGNQSDNEMNCNDDGNSSSNQDSRDSDDSFENSDFENQKAPEDSFGTL
GSMQIKVERYVESESDLRLQNCESLTSDSAKDSDSGGEVNARPSSKTQKRKKRRKKQKVG
SMTRRRLSSTSSPNGLDSAFGGPAQLLSSPNSASVLKIXTEISEPIXFDNDSSIWNYPPN
REISRNESPYSMTKPPSSEHFPLPPXASSYMCPIPDSVLTPPGSEXTASRKTQSSTSSSS
XLAPVSSDPLSPPLSASPRDKHPGGPSTSNSLLYTGIWKPLQRLQAGNVVLPLVHRVTGT
LAATTTAAQRVYTTGTIRYAPAEVTLAMQGNXLPNTHAVNFVDVNSPSFGLDPKTPMEML
XHHVHRLNMSGPFGSAVSGASLTQMPAXNVFTTAEGLFSTLPFPVYSNGIHTTQTLERKR
IEI
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggatcttcccggatttcagcgtgcaggtgactgcggcggcggccggtggggcg
gctgggggagtgccggccgggccaggcatggggagagccagcaccgcagccaacggcaac
ccgcaaaacgttcagggcatcacttcctaccaacaacgaataactgtccagcatcctctg
cccaaccaatcagaatgtaggaaaatctacagatatgacggaatctactgtgaatctacc
taccaaaatttacaagccttgcgaaaggaaaagtcccgagatgctgctcgctctcgccga
ggaaaggaaaattttgaattctacgagttggcaaagttgttgccactccctgcagccatt
acaagtcagcttgacaaggcatccatcatccgacttacaattagctatctgaaaatgagg
gactttgctaatcagggggatcctccatggaacttgagaatggaaggacctccacccaac
acatcagtaaaagggatacaaatgtggaaatctgaggtctgcatgagaaagacaccatgt
gaagttataggtgcccagcgcaggagaagccccagtgcccttgccattgaagtatttgaa
tcacatttgggaagtcacattttacagtccctggatggatttgtatttgcactaaaccaa
gaaggaaaatttttgtacatttcagaaaccgtctccatctatttaggcctatcccaagtg
gaactgacaggcagcagtgtgtttgactatgtccaccccggagaccacgtggagatggca
gagcagctgggcatgaaacttcccccggggcgaggccttctctcgcagggtacagcagag
gatggagccagctcagcatcttcatcttctcagtctgagacccctgagccagtggaatca
acaagccccagtctactaaccactgacaacaccctagagcgctcttttttcatccgaatg
aaatctactctgaccaagcgaggagtgcacatcaaatcatcaggatacaaggtgatccat
ataacaggccgtttacgactgagagtgtcactgtcccatgggaggacagtccctagccaa
atcatggggcttgtagttgtggctcatgctttgccacctcctacaatcaatgaagtcaga
atcgactgccacatgtttgttactcgcgtaaatatggacctcaatatcatttactgtgaa
aataggattagtgattacatggatctgacccctgtagatattgtagggaagagatgttac
cacttcattcatgctgaagatgtggaagggatcaggcatagtcacttagacttgctgaat
aagggtcagtgtgtaactaaatattaccgctggatgcagaagaatggagggtacatctgg
atacagtccagtgctaccatagctatcaatgccaagaacgcaaatgagaagaatatcatc
tgggtcaattaccttcttagtaacccagagtacaaggatacgccgatggatattgcacaa
cttcctcatctgccagagaaaacctcagaatcctcagagacctctgattctgaatcagac
tcaaaggacaactcagaggacaatgagaactcaaagtcagatgacaaaggaaaccaatca
gaaaacagcgaagaccccgaatctgataggaagaagtctgggaatcagtcagataacgaa
atgaactgtaatgatgatgggaacagctccagcaatcaggacagcagggacagtgatgac
agctttgaaaattctgactttgagaatcaaaaggctcctgaggacagttttggtactctt
ggttctatgcagatcaaggtggagcgctacgtggagagtgaatcagacttgcgattgcag
aactgtgaatcgttgacatcagacagcgccaaggactcagatagtggaggggaggtaaat
gcccgtccttccagcaaaacacaaaagaggaagaagaggaggaaaaagcagaaagtaggc
agcatgacccgcagaaggctatccagcacttcaagcccaaatggacttgactcagctttt
ggtggaccagcccagctgctctcgtcgccaaacagtgcctcagtgctcaaaattnaaaca
gagatctcagaacctatcnaatttgataatgatagcagtatttggaattacccacctaac
agggaaatctcaaggaatgaatcgccctacagtatgaccaagcccccaagctcagagcac
ttccccctccccccancagccagcagttacatgtgtcccattccagactctgttctcacc
ccaccggggtctgaanatactgccagccgcaaaactcagtcaagcacctcatccagctcg
ngcctggctcctgtatcctctgaccctttgtcaccaccgctttcagcatctccacgggac
aaacatccaggaggtcccagcacttccaactctttgttgtacactgggatctggaagccc
cttcagaggttgcaagcaggcaatgtggtgcttcctttggttcacagggtaactggaacc
cttgctgccaccacgaccgctgctcagagggtctacaccactggcactattcgatatgct
ccagctgaagttactttagccatgcagggcaacnctctccctaatacccacgctgttaac
tttgttgatgttaacagccccagctttgggctggatcctaaaacaccgatggaaatgctc
ntacaccacgttcaccgactcaatatgtcgggaccatttggaagtgctgtgagcggggcc
agtctgacccaaatgcctgcanggaacgtgttcacaactgccgaaggacttttttccact
cttccatttcctgtgtacagcaatggcattcacactacacagactctggaacggaagagg
attgaaatatga
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