Dermochelys coriacea (leatherback sea turtle): 119858033
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Entry
119858033 CDS
T09064
Symbol
PRPF39
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcc03041
]
119858033 (PRPF39)
Spliceosome [BR:
dcc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
119858033 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
TPR_12
Mad3_BUB1_I
TPR_19
FAT
Motif
Other DBs
NCBI-GeneID:
119858033
NCBI-ProteinID:
XP_038263778
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All DBs
Position
6:complement(127263554..127297041)
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AA seq
669 aa
AA seq
DB search
MQNSDHTEDDCNLSNDNTVNSTDAAGEQLTDFSTEIMSVTEMEQSPDSSPDVNEETTQES
GIPNIQSLHTTDVEAHFPPEYEKFWKVVEENPQDFTGWVYLLQYVEQENHLLAARKAFDR
FFTHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLDPI
DPETNNTVRGAYEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRILGIPTQLY
SHHFQRFKEHTQNNLPRDLLTPEQFIQLRRELASVNGHSGDDAPPGDDLPSGIEDITDPA
KLITEIENMRHRIQEIHQEMFNHNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWREYL
EFEIENGTHERVVVLFERCVISCALYEDFWIKYAKYMENHSIEGVRHVYSRACTIHLPKK
PMVHMLWAAFEEQQGNINEARRILKTFEECVLGLAMVHLRRVSLERRHGNMEEAEHLLQE
AVKNAKSSGESSFYAIKLARHLFKVQKNLPKARKVLLEAIERDKENTKLYLNLLEMEYSG
DLKQNEENILTCFDKAVNGALSIKMRITFSQRKVEFLEDFGSDVNKLLDAYDEHQTLLKE
QDSLKRKAENGSEEPDEKKAHTDDATLASTQMMDGDMQANQVAYNYNAWYQYNYQNAWNY
GQYYAPPPT
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgcagaactcagatcatacagaggatgactgtaacctaagtaatgacaacacagtcaac
agcactgacgcagcaggagagcagcttacggactttagtacagagattatgagtgtcaca
gagatggaacagtctcccgatagctctcctgatgtaaatgaggagaccacacaagagagt
ggaataccaaatattcaaagtttacacacgactgatgttgaggctcatttccctcctgaa
tatgagaagttctggaaagtggtagaggagaatccccaggatttcacaggctgggtatat
ctgctgcagtacgtagagcaggagaaccacttgctggctgccaggaaagcatttgacaga
tttttcacacattatccatattgctatggatattggaaaaagtatgcagaccttgaaaag
cgacatgacaacattaaacagtctgatgaggtgtatcggagagggctacaggcaatacct
cttagtgttgatctttggatacattatataaacttcttaaaagagaccctggatcctatt
gaccctgaaactaataatactgtaagaggagcctatgaacatgcagtcttagctgcaggg
acagatttccgctctgacagactatgggaaatgtatataaattgggaaaatgaacagggc
aacctacgagaagttacagctatatatgatcgtatcctggggattccaacacagctctat
agccatcacttccagaggtttaaagaacacacacaaaataatttgcctcgagaccttcta
actcctgagcagtttattcagctgcgccgggaattggcatctgtcaatggccatagtggg
gatgatgcaccacccggagatgaccttccttctggaattgaggacataactgaccctgca
aagctaatcactgaaatagaaaacatgagacatagaatccaagagattcatcaagaaatg
ttcaatcacaatgaacatgaagtcagcaagaggtggacctttgaagaaggaataaaacga
ccttacttccatgtaaaacctttggagaaagcccagttgaaaaactggagagaatactta
gaatttgagatagaaaatgggacgcatgagcgagttgtggtcctctttgaaagatgtgtt
atttcatgtgccctctatgaggacttctggattaagtatgccaagtatatggagaatcac
agtattgaaggagtgagacatgtctacagcagggcctgtacaatacaccttcctaagaaa
ccaatggttcatatgctatgggctgcctttgaagaacagcagggaaacataaatgaagca
agaagaattttgaaaacatttgaagagtgtgttctgggacttgcaatggttcacttgcga
agagttagcttagaacgccgacatggaaacatggaagaagctgaacacctgcttcaggaa
gctgttaagaatgctaaatcaagcggtgaatcgtcattttatgccatcaaattagctcga
catcttttcaaagttcagaagaaccttccaaaagcaagaaaagtgctgttggaagccatt
gagagagacaaagagaacactaaattgtatctcaacttacttgaaatggaatatagtggg
gatcttaaacaaaatgaagaaaacatcctcacatgttttgacaaagctgtcaatggtgca
ttgtctataaaaatgaggattacattttctcaacgaaaagtggaatttctggaagatttt
ggttctgacgtcaacaagcttttggatgcctatgatgaacatcaaacacttctaaaagag
caggattctttaaaaaggaaagcagaaaatggatcagaggagccagatgagaagaaagca
catacagatgatgcaacgttggcatctacccaaatgatggatggagatatgcaagcaaat
caggttgcatataattataatgcatggtatcagtacaactaccagaatgcctggaattat
ggacagtattatgctccccctccaacctga
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integrated database retrieval system
