Dermochelys coriacea (leatherback sea turtle): 119858046
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Entry
119858046 CDS
T09064
Symbol
LRP5
Name
(RefSeq) low-density lipoprotein receptor-related protein 5 isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc04150
mTOR signaling pathway
dcc04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
119858046 (LRP5)
04150 mTOR signaling pathway
119858046 (LRP5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcc04131
]
119858046 (LRP5)
Membrane trafficking [BR:
dcc04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
119858046 (LRP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
DUF5050
Vgb_lyase
EGF_LRP2
SGL
EGF
cEGF
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
119858046
NCBI-ProteinID:
XP_038263808
LinkDB
All DBs
Position
6:complement(15206393..15467267)
Genome browser
AA seq
1617 aa
AA seq
DB search
METAAAAAPLRLLLLAAALLQCHLGSLRASPLLLFANRRDVRLVDAGGVKPESTVVVSGL
EDAAAVDFQYSQGVIYWTDVSEEAIKQTYLNQTGNVVQNVIISGLVSPDGLACDWIGKKL
YWTDSETNRIEVANLNGTSRNVLFWQDLDQPRAIALDPAHGYMYWTDWGETPRIERAGMD
SSTRKIIVDSDIYWPNGLTIDLDEQKLYWADAKLSFIHRANLDGSFRQKVVEGSLTHPFA
LTLSGETLYWTDWQTRSIHACDKRTGEKKREILNALYSPMDIQVLSPERQPYFHTPCEEN
NGGCSHLCLLSPRDPFYSCACPTGVQLEDDGKTCKAGAEEVLLLARRTDLRRISLDMPDF
TDIILQIDNIRHAIAIDYDPVDGYVYWTDDDVRAIRRAYLDGSGAQTLVTTEINHPDGIA
VDWVARNLYWTDTGTDRIEVTRLNGTSRKILISENLDEPRAIVLNPVMGYMYWTDWGENP
KIECAYLDGSERRVLVNSSLGWPNGLALDLEENKLYWGDAKTDKIEVINVDGTMRKTLLE
DKLPHIFGFTLLGDYIYWTDWQRRSIERVHKIRASRDIIIDQLPDLMGLKAASVTKVFGT
NPCAENNGGCSHLCFFTPLETRCACPIGLELLSDMKTCIIPEAFLVFTSRAAIHRISLET
NNNDVAIPLTGVKEASALDFDVSDNRIYWTDISLKTISRAFMNGSSVEHVIEFGLDYPEG
MAVDWMGKNLYWADTGTNRIEVARLDGQYRQVLVWKDLDNPRSLALDPTKGYMYWTEWGG
KPRIVRAYMDGTNSITLVDKVGRANDLTIDYADQRLYWTDLDTSMIESSNMLGQEREIIA
DDLPHPFGLTQYSDYIYWTDWNLHSIERADKTNGKNRTLIQGHLDFVMDILVFHSSRQDG
LNDCMQNNGQCGQLCLAIPNGYRCGCASHYTLDPNSRNCSSPTSFLLFSQKSAISRMIPD
DQQSPDIILPVHGLRNVKAIDYDPLDKLIYWVDGRQNIIKRAKDDGSQPFTVMSTPNQSQ
NPEKQPHDLSIDTYSHTLYWTCEATNSISVHRLNGEPIGTVLKGDHDKPRAIVVNAERGY
MYFTNMQERAPKIERAALDGTEREVLFSTGLIRPVALVIDNKLGKLFWVDADLKRIESCD
LSGANRVTLEDSNILQPMGLTVLGNHLYWIDRQQQMIERVEKTSGYKRTRIQGRIAHLTG
IHAVEEVDMDEFSAHPCSRDNGGCSHICIAKGDGTPRCSCPDHLVLLQNLLTCGEPPTCS
PDQFTCATGEIDCIPMAWRCDGFPECDDQSDEDSCPICSAAQFQCEKGQCIDARLRCNGE
IDCQDKSDEADCNTICLPNQFRCASGQCILIKQQCDSFPDCIDGSDELMCEKNTSSDEPQ
PHVSAIGPVIGIILSLLVMGGMYFVCQRVVCQRYAGPNGPFPHEYVSGTPHVPLNFIAPG
SSQHGTFTGKDGISCGKSMISSMSLMGGSSGAPLYDRNHVTGASSSSSTSTKATFYPQIL
NPPPSPATDRSLYNTEMFYSSNIPSTTRSYRPYLIRGIAPPTTPCSTDVCDSDYTTSRWK
ANKYYIDLNSDSDPYPPPPTPRSQYMSAEESCPPSPATERSYFHLYPPPPSPCTDSS
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
atggagacggcggcggcggcggccccgctgcggctgctcctgctggccgccgcgctgctt
cagtgccacttgggctcgctgcgggcttctcctcttctgcttttcgccaatcgtcgggat
gtcagactggtggatgctggaggagtgaagccggagtccactgtagtggtcagtggctta
gaagatgccgctgcggttgactttcaatactcacaaggcgtcatttactggacagacgta
agcgaagaagccatcaagcaaacgtacttgaaccaaactgggaatgtagtgcagaatgtc
attatttctggtctggtttctccggatggcctggcatgtgactggattgggaaaaagctg
tactggacggactcggaaaccaataggatagaagtcgctaatctcaatggaacgtctaga
aacgtcctcttctggcaagaccttgaccagccaagggcaattgccttggatccagcacat
gggtacatgtattggaccgactggggagaaacacccagaatagaacgggcaggaatggat
agcagcactcgaaaaataattgttgattcagacatttattggcctaatggactcacaata
gatcttgatgagcagaagctgtactgggctgatgcaaagctgagtttcattcatagagca
aatctggatggttcctttaggcaaaaggttgtggaagggagtctcactcacccgtttgcg
ctgacattgtctggagagacgttgtattggacagactggcagactcgctccattcatgcc
tgtgacaaaaggaccggagagaaaaagagagaaatactgaatgcactttactcaccaatg
gatatccaggtcttgagtccagagcggcagccatactttcatactccctgcgaagaaaac
aatggtggctgctctcacctctgcctgctgtctcccagagatcccttctacagctgtgcc
tgtcccactggagtgcagctggaagatgatggcaagacctgtaaagcaggtgctgaggaa
gtcttgctgcttgctagaaggacagatttgcggagaatctccttggacatgccagacttc
actgatattattctgcagatagacaatatcaggcatgcgattgcaatagactatgatcct
gttgacggctacgtatactggactgacgatgatgtccgggctattcgtcgggcttacctt
gatggttctggagcacagaccctagtgaccacagaaattaatcatcctgatggcatagca
gtggactgggtggcaaggaacctgtactggactgacacaggaacagatcgcattgaagta
acccgattgaatgggacatccagaaagatccttatatcagaaaatctagatgaacccaga
gcgatagtgctaaatcctgtgatgggctacatgtattggacggactggggtgaaaatcca
aagatcgagtgtgcttatctggatggctctgagaggagggtcttagtgaacagttctcta
ggttggcctaatggcttggcactggatcttgaagaaaacaaactctactggggagatgca
aagacagacaaaattgaagtaataaatgttgatggaacaatgagaaaaactctactagaa
gataaacttcctcatatatttgggtttactttgctgggggactacatctactggacagac
tggcagagacgaagcattgaaagagttcacaaaataagagcaagcagggatatcatcata
gatcagttgccagacctaatgggcctcaaagcagcaagtgtgaccaaagtgtttggaacc
aatccttgtgctgagaataatggaggctgcagccatctgtgtttcttcacacctctggag
accagatgtgcttgtcccataggactggagttgctgagcgacatgaagacctgcatcatt
cctgaagccttccttgttttcaccagcagagcagcaattcataggatttcccttgaaacc
aacaataatgatgtagctattcctcttactggtgtcaaagaggcatctgctctggatttt
gatgtgtctgataatagaatctattggactgatattagcttaaagaccataagccgggca
ttcatgaatgggagctctgttgagcatgtgattgagtttgggttagactaccctgaggga
atggcagtagactggatgggaaagaacctttactgggcagatactggaaccaatcgaatt
gaagtagcgcgcctggatggacaatacagacaggttcttgtgtggaaggatttggataac
ccaaggtctttggctcttgatcctactaaagggtatatgtactggacagagtggggaggt
aaaccaaggatcgttcgggcatatatggatgggacaaacagcatcactttggttgataaa
gtgggacgtgccaatgatctaactattgactatgcagaccaaagactgtattggactgac
ctagacacaagtatgattgagtcatcaaacatgctaggtcaagaaagggaaataatagca
gatgatctacctcatccatttggactaacacagtacagtgattacatttactggacagac
tggaacctacacagtatagaaagagcagacaagaccaatgggaagaaccggacactaatt
caaggacatctggattttgtgatggacatactggtctttcactcttcgcgccaggatggc
ttgaatgactgcatgcaaaacaatgggcagtgtggacaattgtgccttgccataccaaat
gggtatagatgtggctgtgcctctcactataccttggatcccaacagcagaaactgcagt
tcacccaccagcttcttgctgtttagccagaagtctgcaatcagtcggatgataccagat
gaccagcaaagtccagatatcatccttcctgtgcatggtctaagaaatgtcaaggccatt
gattatgatcccttagataaactgatttattgggtggatggacgtcagaacattattaaa
agagccaaagatgatggttcccagcctttcactgtcatgagcactccaaaccaaagccaa
aatccagagaagcagccgcatgacttgagtattgatacttacagccataccttgtactgg
acctgcgaggccacaaattcaatcagtgttcacagacttaatggagaaccaattggaacg
gtgttaaaaggagatcatgacaagccaagagccatagtagtcaatgcagagcgagggtac
atgtacttcaccaacatgcaagagcgagccccgaagatagagcgcgcagccctggacggc
acggagcgagaagtgctctttagtaccggtctgatccggcctgttgcgctggtaattgac
aacaagcttgggaaactcttctgggtggacgcagatctcaaacgcattgaaagctgtgat
ttgtcaggagctaaccgtgtcacactggaggactccaatatcctgcagccaatgggactg
actgtgttggggaatcacttgtactggattgaccgtcagcagcagatgattgagagagtt
gagaaaacaagtggatacaagaggactagaatccaaggccgaattgctcacttgacaggc
attcatgcagtggaagaagttgatatggatgaattttctgcacatccatgttcccgtgac
aatggtggctgttcacacatctgcattgcaaaaggagatggaaccccaagatgctcatgc
ccagatcacctggtacttttacagaacctcttaacatgtggagaacctccaacttgttcc
ccagaccagtttacctgtgcgactggggagatagattgtatcccaatggcatggcgatgt
gatggatttccagaatgtgatgatcagagtgatgaagatagctgtcctatatgctcagca
gcccagtttcagtgtgagaaaggacaatgtattgatgcccgcttgcggtgtaatggagaa
attgactgccaagataaatccgacgaagcggactgcaatacaatctgtctcccaaatcag
tttcgatgtgccagtggccagtgcatcctcataaaacagcagtgtgactcctttccagat
tgcatcgatggttccgatgaactcatgtgtgaaaaaaacacatcctcagatgaacctcaa
ccccacgttagtgctattggacctgtcattggtatcatactgtcccttttggtcatggga
ggaatgtattttgtttgccagcgagtggtatgtcagcgctatgctggacccaatggacct
tttccgcatgaatatgtcagcggaacccctcatgtccctcttaattttatagctccaggg
agttctcagcatggcacttttactggtaaggacggcatctcttgtggaaagtctatgatt
agctccatgagcctcatgggaggaagtagcggtgcccctctctatgacagaaaccatgtt
actggagcctcttctagtagttcaacgagcactaaagccactttctacccacagattttg
aatccacctccttccccagccactgatcgctctttatataacacagagatgttctattcc
tcaaacattccttcaacaacaagatcttacagaccctaccttatacgagggatagctccg
cccacgacaccatgcagcacagatgtgtgcgacagcgactacaccacaagccggtggaag
gccaacaaatactacatagatctaaattcagactcagacccttatccccctccccccacg
cctcgcagccagtacatgtctgcagaagaaagctgccctccatctcctgccacagagcga
agctactttcacctctacccccctccgccatctccttgtacagactcctcatga
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