Dermochelys coriacea (leatherback sea turtle): 119858172
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Entry
119858172 CDS
T09064
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119858172 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcc03021
]
119858172 (TAF5)
03036 Chromosome and associated proteins [BR:
dcc03036
]
119858172 (TAF5)
Transcription machinery [BR:
dcc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119858172 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
119858172 (TAF5)
Chromosome and associated proteins [BR:
dcc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
119858172 (TAF5)
STAGA complex
119858172 (TAF5)
TFTC complex
119858172 (TAF5)
SAGA complex
119858172 (TAF5)
SLIK complex
119858172 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_SPT8
PEP5_VPS11_N
Beta-prop_Nup120_160
CDK5RAP3
WD40_like
eIF2A
RAB3GAP2_N
LisH_TPL
VID27
Motif
Other DBs
NCBI-GeneID:
119858172
NCBI-ProteinID:
XP_038264048
LinkDB
All DBs
Position
7:complement(122427248..122451430)
Genome browser
AA seq
791 aa
AA seq
DB search
MAALPEEPAEVVVKPDPEGGVPPQPPPVPSPAAPPTTAPAEGEAAGTPGSGGEAAPPKPA
PPGPAASPAPTDRQTLLAVLQFLRRNNLHESEDILRREARLLGEEVAAAALSPSGPGAQG
TPGGETDAAGGEALLSRVAAASGAAGGSVAVGAAATPAGAVAVPPGKVGGGVPVEDQPDV
SAVLSAYKQQGDPALYEEYYSGLKHFIECALDCHRAELSQLFYPLFVHMYLELVYNQHEN
EAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSYQLLK
RHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKAKVFFGLLK
EPEIEVPLDDEDEEGENEEGKPKKKKPKRESMGSKSKKQDPNAPPQTRIPLPELKDSDKL
DKIMNMKEATKRVRLAPECLPSICFYTFLNAYQGLTAVDVTDDSSMIVGGFADSTVRVWS
VTPKKLRSVKSAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYL
LSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLVNYSLLL
SLWATDHYQPLRIFAGHLADITCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHK
GPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVYALRFSRDGEILASG
SMDNTVRLWDAVKVFEDLETDDFTTATGHINLPENSQDLLLGTYMTKSTPVIHIHFTRRN
LLLASGAYSPQ
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggcggctctacctgaggagccggctgaagtggtggtgaagccggacccggaagggggt
gtcccgccgcagccccctccggttccctcgcccgccgctccccccaccacggcgccggcg
gagggggaggcggcggggaccccggggagcggaggggaggccgctccccccaagccggcc
cccccgggtccggccgcctcccccgcccccacggaccggcagaccctcctggccgtgctc
cagttcctgcgccgcaacaacctccacgagtccgaggacatcctgcgccgggaggcccgg
ctgctgggggaggaggtggccgcggctgccctcagcccctcgggacccggcgcccagggg
acccctggtggggagacagacgccgccgggggcgaggcgctgctcagccgggtcgccgcc
gcctctggagcggccggagggagcgtcgctgttggtgccgctgcgacccccgccggcgcc
gtcgcggtaccgccagggaaagttggaggaggtgttcctgtagaagaccagccagatgtg
agcgcagtgttgtctgcctacaaacagcagggggacccagcgctgtacgaggaatactac
agtggactgaaacactttattgagtgtgccctagactgtcatcgggctgaattatcccag
ttgttttatcctctctttgtgcatatgtatttggaattggtctacaaccagcatgagaat
gaagcaaagtctttctttgaaaagtttcatggggatcaagagtgttattaccaagatgac
ctgcgtgtattatctagtttaaccaaaaaggagcacatgaaagggaatgagaccatgctg
gatttccgaacaagcaagtttgtgctgcgcatttctcgtgactcttaccaactcttgaag
agacaccttcaggaaaaacagaacaatcaaatctggaacattgttcaggaacatctgtac
attgatatctttgatggaatgcctcgcagtaaacaacagatagatgctatggtgggaagc
ttggcaggggaggctaaacgggaggctaataaagcaaaggttttctttggcttattaaaa
gaaccagagattgaggtgcctttggatgatgaagatgaagagggggagaatgaggaagga
aaaccaaagaagaaaaaacctaaaagagagagcatgggatcaaaaagtaaaaagcaagac
cctaatgctcctccacaaaccagaattcctcttcctgaactgaaagactctgacaagctg
gataaaataatgaatatgaaggaagccacaaaacgtgtgcgtcttgctccagaatgtttg
ccttccatctgtttctacacattccttaatgcctaccagggtcttactgcagtggatgtc
actgatgactctagcatgattgtaggaggctttgctgactccactgtaagagtatggtct
gtgacaccaaaaaagctacgcagcgtgaaatcagcagcagatctcagtctcatagacaaa
gaatcagatgatgtcttggagaggatcatggatgagaaaacagcaagcgagttgaagatt
ttatatggtcacagtggacctgtctatggtaccagcttcagtcctgataggaactacctc
ttgtcctgttcagaggatggcactgtcagattgtggagccttcaaacattcacttgcctc
gtgggatataaaggacacaactatccagtatgggatacacagttctctccctatggatat
tactttgtttcaggtggacatgacagagtggctcgtcttgtaaactattctcttctgtta
agcctgtgggctacggatcactatcagcctttacggatatttgctggccatcttgctgac
atcacatgtacccggtttcaccccaactccaactatattgccacgggctcagcagacagg
actgtacgactctgggatgttctgaacgggaactgtgtaagaatcttcactggacataag
ggaccaattcattcattggcattttctcctaatggacgattcctggctactggagcaaca
gatggaagagtgcttctgtgggatattggccatggtttgatggtgggagagttgaaaggg
cacactgatacagtctatgcactcagattcagtagagatggggaaattttagcatcaggt
tcaatggataacacagtcaggctgtgggatgctgtgaaagtttttgaagacttagaaact
gatgattttactacagccactggacatataaacctgcctgaaaactcacaggacttgctg
ttgggtacatacatgaccaaatcaaccccagtcatacacatccattttacccgcagaaac
ttgctactagcttcaggagcatatagtccacaataa
DBGET
integrated database retrieval system
