Dermochelys coriacea (leatherback sea turtle): 119858276
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Entry
119858276 CDS
T09064
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119858276 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dcc03036
]
119858276 (MBD4)
03400 DNA repair and recombination proteins [BR:
dcc03400
]
119858276 (MBD4)
Chromosome and associated proteins [BR:
dcc03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
119858276 (MBD4)
DNA repair and recombination proteins [BR:
dcc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
119858276 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
119858276
NCBI-ProteinID:
XP_038264385
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All DBs
Position
7:complement(19031997..19040870)
Genome browser
AA seq
694 aa
AA seq
DB search
MRTNPKALCLESTGTTPGGGRGKDRNAKPLNQECACATTAASHRHCAHARGGKYCASVDC
AWNTHAQEADWDCSGGRTSARPWRDRILARSSAGVCARYAFAQCGQEWRTPARDRGGASA
MAAPEVRGQEGSDKSNVQIGKKTKKEGKELGTETREYFGLKIEGTETIAENTLQCKEDAA
AVSEVASRCLKNVPDGWEKITKQRQSGKTAGKYDVYFISPQGAKLRSKCALVAYFNKNGE
TVLKPEDFDFTAPFQSKTRSRAKGFGAEAVGLRLQNKECNSKAQDLSVQSSKEEIKVVEL
QTSNEQLENISIHLQGKEDLVIKDIKPKDCCIKSKEKGAIGRRAQIKKARKGSEKRNADH
SQNKRQRKASCNKQEAEGGQIKKFRQKKDVCVSDRGRIDHQNLNLTDTGKANTLPKDEIM
TSGSQSKIHLGLVTALSETESRTMGELGCAERSDDAAAMKSDKNIAERQGSSAFVNEKDW
VNLGNQDFKPGTETDISISQPCDKKSFTSVKMLQEDYIPRTQVERRKTSPYFSNKYSKEA
PSPPRRKAFRKWTPPRSPFNLVQETLFHDPWKLLIATIFLNKTSGKMAVPVLWEFLEKYP
SPEVAKTANWKEMSELLKPLGLYELRAKTIIKFSDEYLTKQWRYPIELHGIGKYGNDSYR
IFCVNEWKEVHPQDHKLNTYQAWLWENHEKMGLN
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgcgcactaaccccaaagccctttgcttagaatcaaccggcacgacgccaggaggtgga
aggggaaaggatagaaacgcaaaaccactgaatcaggaatgcgcatgcgccacgaccgct
gcgtcccataggcactgcgctcacgcgagggggggaaagtattgcgcaagcgtggactgt
gcttggaatacgcatgcgcaagaggcggactgggactgttctggcgggagaacctctgcg
cgcccatggcgggatcgtatattggcgagaagctctgcgggggtgtgcgctaggtacgca
tttgcgcagtgcgggcaggaatggcgtacacccgcacgtgacaggggaggtgcttcagct
atggcggctccggaagtacgcgggcaagagggcagtgacaaaagtaacgtgcaaattgga
aagaaaacaaaaaaagagggaaaagaattagggacagagacaagagaatattttggtcta
aagattgaaggtactgagaccatagcagaaaacacactccagtgcaaagaagatgcagct
gctgtgtcagaagtggcttctagatgtctcaaaaacgttccagatggatgggagaagatc
acaaagcaacgacagtcaggcaaaactgcagggaaatacgatgtttatttcatcagtcct
caaggagcaaagttaagatccaaatgtgcacttgtggcatattttaataaaaatggagag
actgttcttaaaccagaagattttgacttcactgctccttttcagagcaaaactcgatca
agagccaaaggattcggtgcagaagctgtgggactaagattacagaataaagaatgtaac
agtaaagcacaagatcttagtgtgcaaagtagtaaagaagaaattaaagttgtggagttg
cagaccagtaatgagcagctggaaaacatttccatccatctgcagggcaaggaggacttg
gtcattaaagacattaagccaaaggactgttgcataaagtccaaagaaaaaggagcaatt
ggaagaagggctcaaattaagaaagctagaaagggctcagaaaagaggaatgcagatcac
agccaaaataaaaggcagagaaaagcatcatgtaataaacaagaggctgagggcggccaa
atcaaaaaattccggcaaaagaaagatgtttgtgtttctgatagaggcagaatagatcat
caaaacttaaacctcacagatactggaaaagcaaacacactcccaaaggatgaaataatg
acttcaggatcgcaatcgaagatacatcttggactagtaactgctctctcagaaacggag
tcaagaaccatgggagagttgggatgtgcagagaggagtgatgatgcagctgctatgaaa
tctgacaagaatattgcagaaagacaaggatcgagtgcatttgtgaatgagaaggattgg
gtaaatttgggtaaccaggatttcaaacctggcactgaaacagacattagcatttcacag
ccttgtgacaagaaaagctttacatcagtgaaaatgctgcaagaagattatatcccaaga
acacaagtagagagaaggaaaaccagtccatatttttctaataaatacagtaaagaagct
ccaagcccaccaagaaggaaggccttcaggaaatggactcctccgcggtctccatttaat
ttggtccaggaaacgctctttcatgatccttggaagctcctcattgcaaccatatttctc
aataagacctcaggtaagatggcagtacctgtgctctgggagtttctggagaaatatcct
tcccctgaggtagcaaaaactgcaaactggaaagaaatgtcagagttgcttaaacctctt
ggcctctacgaactcagagcgaagaccattatcaaattttcagatgagtatctgaccaag
caatggaggtatcctattgagctgcatgggattggaaagtatggcaatgattcatacaga
atcttctgtgtcaatgaatggaaggaggtacatccacaagatcacaagttaaatacatac
caagcatggctctgggaaaaccatgaaaaaatgggtcttaattga
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